RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 RGS13O14921 159 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 TLX2O43763 284 aaPredicted RBP11.03□□□□□ -0.64
SF3B3-206ENST00000565990 PRKYO43930 277 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 RAD51DO75771 328 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 PRR23D2P0DMB1 279 aaPredicted RBP11.03□□□□□ -0.64
SF3B3-206ENST00000565990 OR8G3PP0DMU2 310 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 SPI1P17947 270 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 SLC2A5P22732 501 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 GABRA5P31644 462 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 TGFBR1P36897 503 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 CENPAP49450 140 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 BLVRAP53004 296 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 PPP3R1P63098 170 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 SCN1BQ07699 218 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 ASAH1Q13510 395 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 TBRG1Q3YBR2 411 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 LINC01590Q5TEZ4 76 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 C9orf135Q5VTT2 229 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 PLBD1Q6P4A8 553 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 DNM1P34Q6PK57 102 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 SKA3Q8IX90 412 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 OR52N1Q8NH53 320 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 NSMAFQ92636 917 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 UFD1Q92890 307 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 KCTD7Q96MP8 289 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 ZNF75AQ96N20 296 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 ZNF582Q96NG8 517 aaPredicted RBP11.03□□□□□ -0.64
SF3B3-206ENST00000565990 IL4I1Q96RQ9 567 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 SPOCK3Q9BQ16 436 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 WACQ9BTA9 647 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 TRAF4Q9BUZ4 470 aaPredicted RBP11.03□□□□□ -0.64
SF3B3-206ENST00000565990 SLC17A5Q9NRA2 495 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 B3GNT2Q9NY97 397 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 ZNF224Q9NZL3 707 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 DNAJC27Q9NZQ0 273 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 ADAM30Q9UKF2 790 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 MOKQ9UQ07 419 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 EXOGQ9Y2C4 368 aaKnown RBP11.03□□□□□ -0.64
SF3B3-206ENST00000565990 LRRK2Q5S007 2527 aa11.03□□□□□ -0.64
SF3B3-206ENST00000565990 FAM183AA6NL82 134 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 TFP02787 698 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 HRGP04196 525 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 THBDP07204 575 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 PAICSP22234 425 aaKnown RBP11.02□□□□□ -0.65
SF3B3-206ENST00000565990 S100A1P23297 94 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 IL32P24001 234 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 CDAP32320 146 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 TPTEP56180 551 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 LSM6P62312 80 aaKnown RBP11.02□□□□□ -0.65
SF3B3-206ENST00000565990 HSF2Q03933 536 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 GLO1Q04760 184 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 RIPPLY1Q0D2K3 151 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 TRAM1Q15629 374 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 PCK2Q16822 640 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 CCDC92Q53HC0 331 aaPredicted RBP11.02□□□□□ -0.65
SF3B3-206ENST00000565990 SLC35D3Q5M8T2 416 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 DDI2Q5TDH0 399 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 NXNL2Q5VZ03 156 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 SP5Q6BEB4 398 aaPredicted RBP11.02□□□□□ -0.65
SF3B3-206ENST00000565990 SEZ6L2Q6UXD5 910 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 ZNF813Q6ZN06 617 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 GDPD3Q7L5L3 318 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 DPPA2Q7Z7J5 298 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 SYT9Q86SS6 491 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 GID4Q8IVV7 300 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 FAM169BQ8N8A8 192 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 IL17RDQ8NFM7 739 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 TEAD3Q99594 435 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 SDHCQ99643 169 aaPredicted RBP11.02□□□□□ -0.65
SF3B3-206ENST00000565990 ACTR6Q9GZN1 396 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 SRRQ9GZT4 340 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 MARCH7Q9H992 704 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 EXOSC4Q9NPD3 245 aaKnown RBP11.02□□□□□ -0.65
SF3B3-206ENST00000565990 POLE4Q9NR33 117 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 INPP5EQ9NRR6 644 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 NDRG3Q9UGV2 375 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 SLC25A15Q9Y619 301 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 V9GYH0 126 aa11.02□□□□□ -0.65
SF3B3-206ENST00000565990 USP9YO00507 2555 aaPredicted RBP11.02□□□□□ -0.65
SF3B3-206ENST00000565990 ICE1Q9Y2F5 2266 aa11.01□□□□□ -0.65
SF3B3-206ENST00000565990 A0A096LPE4 126 aa11.01□□□□□ -0.65
SF3B3-206ENST00000565990 A0A1W2PPZ6 126 aa11.01□□□□□ -0.65
SF3B3-206ENST00000565990 TUBAL3A6NHL2 446 aa11.01□□□□□ -0.65
SF3B3-206ENST00000565990 GLCEO94923 617 aa11.01□□□□□ -0.65
SF3B3-206ENST00000565990 MPZL1O95297 269 aa11.01□□□□□ -0.65
SF3B3-206ENST00000565990 FARS2O95363 451 aaKnown RBP11.01□□□□□ -0.65
SF3B3-206ENST00000565990 HLA-DQB1P01920 261 aa11.01□□□□□ -0.65
SF3B3-206ENST00000565990 KRT8P05787 483 aa11.01□□□□□ -0.65
SF3B3-206ENST00000565990 CST2P09228 141 aa11.01□□□□□ -0.65
SF3B3-206ENST00000565990 MMP7P09237 267 aaPredicted RBP11.01□□□□□ -0.65
SF3B3-206ENST00000565990 CLUP10909 449 aa11.01□□□□□ -0.65
SF3B3-206ENST00000565990 EPXP11678 715 aa11.01□□□□□ -0.65
SF3B3-206ENST00000565990 B4GALT1P15291 398 aa11.01□□□□□ -0.65
SF3B3-206ENST00000565990 SDC2P34741 201 aa11.01□□□□□ -0.65
SF3B3-206ENST00000565990 RPS19P39019 145 aaKnown RBP11.01□□□□□ -0.65
SF3B3-206ENST00000565990 GUCA1AP43080 201 aaPredicted RBP11.01□□□□□ -0.65
SF3B3-206ENST00000565990 MTNR1AP48039 350 aa11.01□□□□□ -0.65
SF3B3-206ENST00000565990 DBPQ10586 325 aaPredicted RBP11.01□□□□□ -0.65
SF3B3-206ENST00000565990 TAB1Q15750 504 aa11.01□□□□□ -0.65
SF3B3-206ENST00000565990 HIKESHIQ53FT3 197 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 253.6 ms