RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 ATF1P18846 271 aa17.2■□□□□ 0.34
CLN6-205ENST00000564846 IFITM3Q01628 133 aa17.2■□□□□ 0.34
CLN6-205ENST00000564846 RGS21Q2M5E4 152 aa17.2■□□□□ 0.34
CLN6-205ENST00000564846 ELFN2Q5R3F8 820 aa17.2■□□□□ 0.34
CLN6-205ENST00000564846 METAP1DQ6UB28 335 aaPredicted RBP17.2■□□□□ 0.34
CLN6-205ENST00000564846 LRRTM1Q86UE6 522 aa17.2■□□□□ 0.34
CLN6-205ENST00000564846 SLC22A24Q8N4F4 322 aa17.2■□□□□ 0.34
CLN6-205ENST00000564846 APH1AQ96BI3 265 aa17.2■□□□□ 0.34
CLN6-205ENST00000564846 WACQ9BTA9 647 aa17.2■□□□□ 0.34
CLN6-205ENST00000564846 CLEC4AQ9UMR7 237 aa17.2■□□□□ 0.34
CLN6-205ENST00000564846 AKAP13Q12802 2813 aa17.2■□□□□ 0.34
CLN6-205ENST00000564846 ZNF407Q9C0G0 2248 aa17.2■□□□□ 0.34
CLN6-205ENST00000564846 H3BSH0 61 aa17.2■□□□□ 0.34
CLN6-205ENST00000564846 AIPO00170 330 aa17.2■□□□□ 0.34
CLN6-205ENST00000564846 TTRP02766 147 aa17.2■□□□□ 0.34
CLN6-205ENST00000564846 EVX1P49640 407 aa17.2■□□□□ 0.34
CLN6-205ENST00000564846 PRKXP51817 358 aa17.2■□□□□ 0.34
CLN6-205ENST00000564846 SCRN3Q0VDG4 424 aa17.2■□□□□ 0.34
CLN6-205ENST00000564846 CCDC92Q53HC0 331 aaPredicted RBP17.2■□□□□ 0.34
CLN6-205ENST00000564846 FAM131AQ6UXB0 335 aa17.2■□□□□ 0.34
CLN6-205ENST00000564846 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.2■□□□□ 0.34
CLN6-205ENST00000564846 LRRC28Q86X40 367 aaPredicted RBP17.2■□□□□ 0.34
CLN6-205ENST00000564846 SNX29P2Q8IUI4 249 aa17.2■□□□□ 0.34
CLN6-205ENST00000564846 ZNF433Q8N7K0 673 aaPredicted RBP17.2■□□□□ 0.34
CLN6-205ENST00000564846 TRMT10AQ8TBZ6 339 aaKnown RBP17.2■□□□□ 0.34
CLN6-205ENST00000564846 FBXO17Q96EF6 278 aa17.2■□□□□ 0.34
CLN6-205ENST00000564846 GFI1Q99684 422 aa17.2■□□□□ 0.34
CLN6-205ENST00000564846 SLC7A10Q9NS82 523 aa17.2■□□□□ 0.34
CLN6-205ENST00000564846 CKLFQ9UBR5 152 aa17.2■□□□□ 0.34
CLN6-205ENST00000564846 SLC5A6Q9Y289 635 aa17.2■□□□□ 0.34
CLN6-205ENST00000564846 IFITM5A6NNB3 132 aa17.19■□□□□ 0.34
CLN6-205ENST00000564846 MKRN2OSH3BPM6 223 aa17.19■□□□□ 0.34
CLN6-205ENST00000564846 TBX1O43435 398 aa17.19■□□□□ 0.34
CLN6-205ENST00000564846 APOC1P02654 83 aa17.19■□□□□ 0.34
CLN6-205ENST00000564846 ACSM4P0C7M7 580 aa17.19■□□□□ 0.34
CLN6-205ENST00000564846 B4GALT1P15291 398 aa17.19■□□□□ 0.34
CLN6-205ENST00000564846 CX3CR1P49238 355 aa17.19■□□□□ 0.34
CLN6-205ENST00000564846 ZNF121P58317 390 aaPredicted RBP17.19■□□□□ 0.34
CLN6-205ENST00000564846 PCBD1P61457 104 aa17.19■□□□□ 0.34
CLN6-205ENST00000564846 CNIH2Q6PI25 160 aa17.19■□□□□ 0.34
CLN6-205ENST00000564846 XKRXQ6PP77 449 aa17.19■□□□□ 0.34
CLN6-205ENST00000564846 LUZP2Q86TE4 346 aa17.19■□□□□ 0.34
CLN6-205ENST00000564846 SIAH3Q8IW03 269 aa17.19■□□□□ 0.34
CLN6-205ENST00000564846 ZNF283Q8N7M2 679 aa17.19■□□□□ 0.34
CLN6-205ENST00000564846 OR13C3Q8NGS6 347 aa17.19■□□□□ 0.34
CLN6-205ENST00000564846 SARAFQ96BY9 339 aa17.19■□□□□ 0.34
CLN6-205ENST00000564846 SH3GL3Q99963 347 aa17.19■□□□□ 0.34
CLN6-205ENST00000564846 MRI1Q9BV20 369 aa17.19■□□□□ 0.34
CLN6-205ENST00000564846 OCEL1Q9H607 264 aa17.19■□□□□ 0.34
CLN6-205ENST00000564846 PLSCR2Q9NRY7 297 aa17.19■□□□□ 0.34
CLN6-205ENST00000564846 PLEK2Q9NYT0 353 aa17.19■□□□□ 0.34
CLN6-205ENST00000564846 DKK4Q9UBT3 224 aa17.19■□□□□ 0.34
CLN6-205ENST00000564846 FOXJ3Q9UPW0 622 aa17.19■□□□□ 0.34
CLN6-205ENST00000564846 TRAV8-7A0A075B6U6 113 aa17.18■□□□□ 0.34
CLN6-205ENST00000564846 ISPDA4D126 451 aa17.18■□□□□ 0.34
CLN6-205ENST00000564846 ZNF587BE7ETH6 402 aa17.18■□□□□ 0.34
CLN6-205ENST00000564846 P2RY10O00398 339 aa17.18■□□□□ 0.34
CLN6-205ENST00000564846 TGM6O95932 706 aa17.18■□□□□ 0.34
CLN6-205ENST00000564846 PTBP1P26599 531 aaKnown RBP eCLIP17.18■□□□□ 0.34
CLN6-205ENST00000564846 EIF2S3P41091 472 aaKnown RBP17.18■□□□□ 0.34
CLN6-205ENST00000564846 ZNF79Q15937 498 aa17.18■□□□□ 0.34
CLN6-205ENST00000564846 ADGRE4PQ86SQ3 457 aa17.18■□□□□ 0.34
CLN6-205ENST00000564846 TAAR6Q96RI8 345 aa17.18■□□□□ 0.34
CLN6-205ENST00000564846 SRRQ9GZT4 340 aa17.18■□□□□ 0.34
CLN6-205ENST00000564846 HDHD2Q9H0R4 259 aa17.18■□□□□ 0.34
CLN6-205ENST00000564846 ABCB10Q9NRK6 738 aa17.18■□□□□ 0.34
CLN6-205ENST00000564846 GLRX2Q9NS18 164 aa17.18■□□□□ 0.34
CLN6-205ENST00000564846 PHF3Q92576 2039 aaKnown RBP17.18■□□□□ 0.34
CLN6-205ENST00000564846 FARS2O95363 451 aaKnown RBP17.17■□□□□ 0.34
CLN6-205ENST00000564846 IGHV3-9P01782 118 aa17.17■□□□□ 0.34
CLN6-205ENST00000564846 ADRA2CP18825 462 aa17.17■□□□□ 0.34
CLN6-205ENST00000564846 FSTP19883 344 aa17.17■□□□□ 0.34
CLN6-205ENST00000564846 OTX1P32242 354 aaPredicted RBP17.17■□□□□ 0.34
CLN6-205ENST00000564846 ECH1Q13011 328 aa17.17■□□□□ 0.34
CLN6-205ENST00000564846 RAB35Q15286 201 aa17.17■□□□□ 0.34
CLN6-205ENST00000564846 RPUSD3Q6P087 351 aaKnown RBP17.17■□□□□ 0.34
CLN6-205ENST00000564846 ZNF100Q8IYN0 542 aa17.17■□□□□ 0.34
CLN6-205ENST00000564846 SAMD12Q8N8I0 201 aa17.17■□□□□ 0.34
CLN6-205ENST00000564846 SPTSSAQ969W0 71 aa17.17■□□□□ 0.34
CLN6-205ENST00000564846 SDHCQ99643 169 aaPredicted RBP17.17■□□□□ 0.34
CLN6-205ENST00000564846 SOSTQ9BQB4 213 aa17.17■□□□□ 0.34
CLN6-205ENST00000564846 TIMM10BQ9Y5J6 103 aa17.17■□□□□ 0.34
CLN6-205ENST00000564846 DNAJC13O75165 2243 aa17.17■□□□□ 0.34
CLN6-205ENST00000564846 ANXA2P2A6NMY6 339 aa17.17■□□□□ 0.34
CLN6-205ENST00000564846 TTLL8A6PVC2 850 aa17.17■□□□□ 0.34
CLN6-205ENST00000564846 FAM25AB3EWG3 89 aa17.17■□□□□ 0.34
CLN6-205ENST00000564846 FAM25CB3EWG5 89 aa17.17■□□□□ 0.34
CLN6-205ENST00000564846 FAM25GB3EWG6 89 aa17.17■□□□□ 0.34
CLN6-205ENST00000564846 RRP8O43159 456 aaKnown RBP17.17■□□□□ 0.34
CLN6-205ENST00000564846 SGCEO43556 437 aa17.17■□□□□ 0.34
CLN6-205ENST00000564846 SYT7O43581 403 aa17.17■□□□□ 0.34
CLN6-205ENST00000564846 PDGFAP04085 211 aa17.17■□□□□ 0.34
CLN6-205ENST00000564846 ANXA2P07355 339 aaKnown RBP17.17■□□□□ 0.34
CLN6-205ENST00000564846 ELK1P19419 428 aa17.17■□□□□ 0.34
CLN6-205ENST00000564846 GALK2Q01415 458 aa17.17■□□□□ 0.34
CLN6-205ENST00000564846 ZNF813Q6ZN06 617 aa17.17■□□□□ 0.34
CLN6-205ENST00000564846 SLC16A14Q7RTX9 510 aa17.17■□□□□ 0.34
CLN6-205ENST00000564846 P4HA3Q7Z4N8 544 aa17.17■□□□□ 0.34
CLN6-205ENST00000564846 LYSMD2Q8IV50 215 aa17.17■□□□□ 0.34
CLN6-205ENST00000564846 GDPD1Q8N9F7 314 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms