RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 CDKN2AP42771 156 aaKnown RBP10.28□□□□□ -0.76
GTF3C1-204ENST00000564664 SLC6A9P48067 706 aa10.28□□□□□ -0.76
GTF3C1-204ENST00000564664 BTG1P62324 171 aa10.28□□□□□ -0.76
GTF3C1-204ENST00000564664 SLC36A3Q495N2 470 aa10.28□□□□□ -0.76
GTF3C1-204ENST00000564664 SPATS1Q496A3 300 aa10.28□□□□□ -0.76
GTF3C1-204ENST00000564664 THSD4Q6ZMP0 1018 aa10.28□□□□□ -0.76
GTF3C1-204ENST00000564664 Q6ZR03 302 aa10.28□□□□□ -0.76
GTF3C1-204ENST00000564664 MUC20Q8N307 709 aaPredicted RBP10.28□□□□□ -0.76
GTF3C1-204ENST00000564664 BPIFB2Q8N4F0 458 aa10.28□□□□□ -0.76
GTF3C1-204ENST00000564664 OR8G5Q8NG78 346 aa10.28□□□□□ -0.76
GTF3C1-204ENST00000564664 GCDHQ92947 438 aaPredicted RBP10.28□□□□□ -0.76
GTF3C1-204ENST00000564664 MCUR1Q96AQ8 359 aa10.28□□□□□ -0.76
GTF3C1-204ENST00000564664 ZMYND19Q96E35 227 aaPredicted RBP10.28□□□□□ -0.76
GTF3C1-204ENST00000564664 ZNF582Q96NG8 517 aaPredicted RBP10.28□□□□□ -0.76
GTF3C1-204ENST00000564664 GPA33Q99795 319 aa10.28□□□□□ -0.76
GTF3C1-204ENST00000564664 ELAC2Q9BQ52 826 aaKnown RBP10.28□□□□□ -0.76
GTF3C1-204ENST00000564664 RERGLQ9H628 205 aa10.28□□□□□ -0.76
GTF3C1-204ENST00000564664 UBAP1Q9NZ09 502 aa10.28□□□□□ -0.76
GTF3C1-204ENST00000564664 EGFL7Q9UHF1 273 aa10.28□□□□□ -0.76
GTF3C1-204ENST00000564664 OPN4Q9UHM6 478 aa10.28□□□□□ -0.76
GTF3C1-204ENST00000564664 MAGEL2Q9UJ55 1249 aa10.28□□□□□ -0.76
GTF3C1-204ENST00000564664 B9D1Q9UPM9 204 aa10.28□□□□□ -0.76
GTF3C1-204ENST00000564664 DYSFO75923 2080 aa10.28□□□□□ -0.76
GTF3C1-204ENST00000564664 TRBV4-1A0A0J9YWV2 114 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 A8MXK9 166 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 SOCS2O14508 198 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 RER1O15258 196 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 GADD45GO95257 159 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 RENP00797 406 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 FSHBP01225 129 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 HSD17B1P14061 328 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 FPR3P25089 353 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 CFPP27918 469 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 SLC6A6P31641 620 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 SRP9P49458 86 aaKnown RBP10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 LCN2P80188 198 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 COX10Q12887 443 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 SEC23BQ15437 767 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 ZNF181Q2M3W8 571 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 COLCA1Q6ZS62 124 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 PTCHD4Q6ZW05 846 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 ZBTB46Q86UZ6 589 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 JAZF1Q86VZ6 243 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 ATG16L2Q8NAA4 619 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 OR52J3Q8NH60 311 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 ITLN1Q8WWA0 313 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 ERGIC1Q969X5 290 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 ERMAPQ96PL5 475 aaPredicted RBP10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 OR2V2Q96R30 315 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 POFUT1Q9H488 388 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 POLR1DQ9Y2S0 133 aa10.27□□□□□ -0.77
GTF3C1-204ENST00000564664 TANC2Q9HCD6 1990 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 IGLV1-36A0A0B4J1U3 117 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 A0A1B0GWJ7 208 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 LRRC30A6NM36 301 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 IQCF6A8MYZ5 107 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 TMEM178BH3BS89 294 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 KRT36O76013 467 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 PPIAL4GP0DN37 164 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 ZFP36P26651 326 aaKnown RBP10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 FXYD6P3P58550 94 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 ACTG1P63261 375 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 ZNF154Q13106 437 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 KRTAP27-1Q3LI81 207 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 SPRNQ5BIV9 151 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 SAMD4BQ5PRF9 694 aaKnown RBP10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 C1orf94Q6P1W5 598 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 RBMS3Q6XE24 437 aaKnown RBP10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 C1orf87Q8N0U7 546 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 OR6V1Q8N148 313 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 LINC00471Q8N535 108 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 CELF2-AS1Q8N7Q2 184 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 SIGLEC11Q96RL6 698 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 SLC30A2Q9BRI3 323 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 MRI1Q9BV20 369 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 CDADC1Q9BWV3 514 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 HCAR1Q9BXC0 346 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 C1QTNF5Q9BXJ0 243 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 NSRP1Q9H0G5 558 aaKnown RBP10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 SRA1Q9HD15 236 aaKnown RBP10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 GCM1Q9NP62 436 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 IL1RAPQ9NPH3 570 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 TMEM100Q9NV29 134 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 NDE1Q9NXR1 346 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 IL20RAQ9UHF4 553 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 KCNG2Q9UJ96 466 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 NUP50Q9UKX7 468 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 TMCC3Q9ULS5 477 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 LRCH1Q9Y2L9 728 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 LHFPL6Q9Y693 200 aa10.26□□□□□ -0.77
GTF3C1-204ENST00000564664 F5H0A9 414 aaPredicted RBP10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 SNX3O60493 162 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 SEMG1P04279 462 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 DBHP09172 617 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 WNT2P09544 360 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 ZNF12P17014 697 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 NOS3P29474 1203 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 CENPAP49450 140 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 HMGA2P52926 109 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 MALLQ13021 153 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms