RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.04□□□□□ -1.92
CHD9-212ENST00000564641 CMTM8Q8IZV2 173 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 RDH10Q8IZV5 341 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 LRRC52Q8N7C0 313 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 ZNF557Q8N988 423 aaPredicted RBP3.04□□□□□ -1.92
CHD9-212ENST00000564641 GDPD1Q8N9F7 314 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 CHDHQ8NE62 594 aaPredicted RBP3.04□□□□□ -1.92
CHD9-212ENST00000564641 OR4M2Q8NGB6 313 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 OR52B4Q8NGK2 314 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 OR4L1Q8NH43 312 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 NANPQ8TBE9 248 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 FAM45AQ8TCE6 357 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 RPL3LQ92901 407 aaKnown RBP3.04□□□□□ -1.92
CHD9-212ENST00000564641 HIST1H2ACQ93077 130 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 MYLPFQ96A32 169 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 RAB7BQ96AH8 199 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 ROPN1LQ96C74 230 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 C11orf24Q96F05 449 aaPredicted RBP3.04□□□□□ -1.92
CHD9-212ENST00000564641 C16orf58Q96GQ5 468 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 SENP8Q96LD8 212 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 PPP1R36Q96LQ0 422 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 ACBD6Q9BR61 282 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 FEM1AQ9BSK4 669 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 EDEM2Q9BV94 578 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 MND1Q9BWT6 205 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 BEX2Q9BXY8 128 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 NXF2Q9GZY0 626 aaKnown RBP3.04□□□□□ -1.92
CHD9-212ENST00000564641 FAM124BQ9H5Z6 455 aaPredicted RBP3.04□□□□□ -1.92
CHD9-212ENST00000564641 ZNF385DQ9H6B1 395 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 ZNF665Q9H7R5 613 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 CAB39LQ9H9S4 337 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 CHRAC1Q9NRG0 131 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 DEPPQ9NTK1 212 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 UFSP2Q9NUQ7 469 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 MCUBQ9NWR8 336 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 COA4Q9NYJ1 87 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 BFARQ9NZS9 450 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 WRAP73Q9P2S5 460 aaPredicted RBP3.04□□□□□ -1.92
CHD9-212ENST00000564641 ERVK-18Q9QC07 812 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 MLXQ9UH92 298 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 EMCNQ9ULC0 261 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 ZNF490Q9ULM2 529 aaPredicted RBP3.04□□□□□ -1.92
CHD9-212ENST00000564641 SCML1Q9UN30 329 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 ABCG2Q9UNQ0 655 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 MGAT4BQ9UQ53 548 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 NDUFAF1Q9Y375 327 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 ORC6Q9Y5N6 252 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 GMPPBQ9Y5P6 360 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 U3KQ87 197 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 ACACAQ13085 2346 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 KNTC1P50748 2209 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 GON4LQ3T8J9 2241 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 ANKRD11Q6UB99 2663 aaPredicted RBP3.04□□□□□ -1.92
CHD9-212ENST00000564641 PCNX2A6NKB5 2137 aa3.04□□□□□ -1.92
CHD9-212ENST00000564641 SYNJ2BP-COX16A0A087WUM0 186 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 LOC100130705A0A1B0GUX0 176 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 FAM230AA0A1W2PPH8 454 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 CIB4A0PJX0 185 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 ARGFXA6NJG6 315 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 BBIP1A8MTZ0 92 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 HACD1B0YJ81 288 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 LMO7DNF2Z398 122 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 G3V2T6 193 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 GNGT2O14610 69 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 MYL12BO14950 172 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 UBDO15205 165 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 SGCEO43556 437 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 CST8O60676 142 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 KBTBD11O94819 623 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 SUPT7LO94864 414 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 NDUFA7O95182 113 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 PIGRP01833 764 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 APODP05090 189 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 IL6P05231 212 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 C2P06681 752 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 CXCL8P10145 99 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 RRASP10301 218 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 NCF1P14598 390 aaPredicted RBP3.03□□□□□ -1.92
CHD9-212ENST00000564641 CD1EP15812 388 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 CD1DP15813 335 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 MYL12AP19105 171 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 ATP6V1B2P21281 511 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 CPN2P22792 545 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 RPS3P23396 243 aaKnown RBP eCLIP3.03□□□□□ -1.92
CHD9-212ENST00000564641 S100PP25815 95 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 ETV6P41212 452 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 CSKP41240 450 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 NOVA1P51513 510 aaKnown RBP3.03□□□□□ -1.92
CHD9-212ENST00000564641 SLC7A2P52569 658 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 AIF1P55008 147 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 PSMD4P55036 377 aaKnown RBP3.03□□□□□ -1.92
CHD9-212ENST00000564641 SNRPFP62306 86 aaKnown RBP3.03□□□□□ -1.92
CHD9-212ENST00000564641 HERVK_113P63132 956 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 HSF2Q03933 536 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 CD47Q08722 323 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 ELP6Q0PNE2 266 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 IL18R1Q13478 541 aa3.03□□□□□ -1.92
CHD9-212ENST00000564641 PIGHQ14442 188 aaPredicted RBP3.03□□□□□ -1.92
CHD9-212ENST00000564641 EXOSC7Q15024 291 aaKnown RBP3.03□□□□□ -1.92
CHD9-212ENST00000564641 CYP51A1Q16850 503 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms