RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 TTC29Q8NA56 475 aaPredicted RBP1.4□□□□□ -2.19
CHD9-211ENST00000564600 C11orf72Q8NBR9 251 aa1.4□□□□□ -2.19
CHD9-211ENST00000564600 CCDC148Q8NFR7 591 aa1.4□□□□□ -2.19
CHD9-211ENST00000564600 GPX8Q8TED1 209 aa1.4□□□□□ -2.19
CHD9-211ENST00000564600 ABHD3Q8WU67 409 aa1.4□□□□□ -2.19
CHD9-211ENST00000564600 PEX13Q92968 403 aa1.4□□□□□ -2.19
CHD9-211ENST00000564600 CIDECQ96AQ7 238 aaPredicted RBP1.4□□□□□ -2.19
CHD9-211ENST00000564600 FAM3DQ96BQ1 224 aa1.4□□□□□ -2.19
CHD9-211ENST00000564600 RMI2Q96E14 147 aa1.4□□□□□ -2.19
CHD9-211ENST00000564600 MED8Q96G25 268 aa1.4□□□□□ -2.19
CHD9-211ENST00000564600 BTN2A3PQ96KV6 586 aa1.4□□□□□ -2.19
CHD9-211ENST00000564600 OR2A5Q96R48 311 aa1.4□□□□□ -2.19
CHD9-211ENST00000564600 SLC29A1Q99808 456 aa1.4□□□□□ -2.19
CHD9-211ENST00000564600 BPIFA3Q9BQP9 254 aa1.4□□□□□ -2.19
CHD9-211ENST00000564600 ACTR3CQ9C0K3 210 aaPredicted RBP1.4□□□□□ -2.19
CHD9-211ENST00000564600 IL22Q9GZX6 179 aa1.4□□□□□ -2.19
CHD9-211ENST00000564600 SLC40A1Q9NP59 571 aa1.4□□□□□ -2.19
CHD9-211ENST00000564600 KIAA1257Q9ULG3 409 aa1.4□□□□□ -2.19
CHD9-211ENST00000564600 PALLDQ8WX93 1383 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 TRAV6A0A075B6T7 132 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 PDZK1P1A8MUH7 402 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 K7EMT4 169 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 BPY2O14599 106 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 DPM1O60762 260 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 FKBP6O75344 327 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 LCA5LO95447 670 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 CLIC3O95833 236 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 OXTP01178 125 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 HBE1P02100 147 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 CRYGCP07315 174 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 UBTFL6P0CB48 400 aaPredicted RBP1.39□□□□□ -2.19
CHD9-211ENST00000564600 STAG3L3P0CL85 134 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 OR5H8P0DN80 308 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 RNASE2P10153 161 aaKnown RBP1.39□□□□□ -2.19
CHD9-211ENST00000564600 GZMAP12544 262 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 ZNF250P15622 560 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 PRKACAP17612 351 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 PSMC3P17980 439 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 RAB3AP20336 220 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 RAB4AP20338 218 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 GSTM3P21266 225 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 BCKDHBP21953 392 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 CPN2P22792 545 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 HMOX2P30519 316 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 RPS5P46782 204 aaKnown RBP1.39□□□□□ -2.19
CHD9-211ENST00000564600 UQCRFS1P47985 274 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 SYNJ2BPP57105 145 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 DAOAP59103 153 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 ESRRGP62508 458 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 ARG2P78540 354 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 LOXL1Q08397 574 aaPredicted RBP1.39□□□□□ -2.19
CHD9-211ENST00000564600 ECH1Q13011 328 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 ZBED5Q49AG3 693 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 CCNJQ5T5M9 372 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 TMCO2Q7Z6W1 182 aaPredicted RBP1.39□□□□□ -2.19
CHD9-211ENST00000564600 ZNF547Q8IVP9 402 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 OFCC1Q8IZS5 231 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 GATSQ8NAP1 163 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 OR56A4Q8NGH8 313 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 LYPD6BQ8NI32 183 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 NAT6Q93015 286 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 SMARCD1Q96GM5 515 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 PRRC1Q96M27 445 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 GPR21Q99679 349 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 SAMD10Q9BYL1 202 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 FANCEQ9HB96 536 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 NOX3Q9HBY0 568 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 SLCO1B3Q9NPD5 702 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 ZDHHC4Q9NPG8 344 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 TREX1Q9NSU2 369 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 OR12D3Q9UGF7 316 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 RCL1Q9Y2P8 373 aaKnown RBP1.39□□□□□ -2.19
CHD9-211ENST00000564600 TTC41PQ6P2S7 1318 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 ADGRA3Q8IWK6 1321 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 CAMTA1Q9Y6Y1 1673 aa1.39□□□□□ -2.19
CHD9-211ENST00000564600 TSPAN11A1L157 253 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 NCF1BA6NI72 391 aaPredicted RBP1.38□□□□□ -2.19
CHD9-211ENST00000564600 NCBP2LA6PVI3 153 aaKnown RBP1.38□□□□□ -2.19
CHD9-211ENST00000564600 GABRR3A8MPY1 467 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 NCF1CA8MVU1 366 aaPredicted RBP1.38□□□□□ -2.19
CHD9-211ENST00000564600 ZNF99A8MXY4 864 aaPredicted RBP1.38□□□□□ -2.19
CHD9-211ENST00000564600 INS-IGF2F8WCM5 200 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 GOLGA8TH3BQL2 631 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 M0R3G1 203 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 DNASE2O00115 360 aaPredicted RBP1.38□□□□□ -2.19
CHD9-211ENST00000564600 ZBTB5O15062 677 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 NUPL2O15504 423 aaKnown RBP1.38□□□□□ -2.19
CHD9-211ENST00000564600 ZNF207O43670 478 aaKnown RBP1.38□□□□□ -2.19
CHD9-211ENST00000564600 GCM2O75603 506 aaPredicted RBP1.38□□□□□ -2.19
CHD9-211ENST00000564600 OTCP00480 354 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 CD74P04233 296 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 ARG1P05089 322 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 RALBP11234 206 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 PGAM1P18669 254 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 CNR1P21554 472 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 GTF2E2P29084 291 aaKnown RBP1.38□□□□□ -2.19
CHD9-211ENST00000564600 OR1E1P30953 314 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 PFN2P35080 140 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 PEX19P40855 299 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 CYB561P49447 251 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms