RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 CCDC92Q53HC0 331 aaPredicted RBP12.67□□□□□ -0.38
SPG7-210ENST00000564409 SAMD4BQ5PRF9 694 aaKnown RBP12.67□□□□□ -0.38
SPG7-210ENST00000564409 C12orf54Q6X4T0 127 aa12.67□□□□□ -0.38
SPG7-210ENST00000564409 PTCHD4Q6ZW05 846 aa12.67□□□□□ -0.38
SPG7-210ENST00000564409 LRRC28Q86X40 367 aaPredicted RBP12.67□□□□□ -0.38
SPG7-210ENST00000564409 MUC20Q8N307 709 aaPredicted RBP12.67□□□□□ -0.38
SPG7-210ENST00000564409 OR13G1Q8NGZ3 307 aa12.67□□□□□ -0.38
SPG7-210ENST00000564409 RBM4Q9BWF3 364 aaKnown RBP12.67□□□□□ -0.38
SPG7-210ENST00000564409 C7orf69Q9H7B7 122 aa12.67□□□□□ -0.38
SPG7-210ENST00000564409 UBAP1Q9NZ09 502 aa12.67□□□□□ -0.38
SPG7-210ENST00000564409 RER1O15258 196 aa12.66□□□□□ -0.38
SPG7-210ENST00000564409 SNX3O60493 162 aa12.66□□□□□ -0.38
SPG7-210ENST00000564409 FSTL3O95633 263 aa12.66□□□□□ -0.38
SPG7-210ENST00000564409 SBK2P0C263 348 aa12.66□□□□□ -0.38
SPG7-210ENST00000564409 COMPP49747 757 aaPredicted RBP12.66□□□□□ -0.38
SPG7-210ENST00000564409 BTG1P62324 171 aa12.66□□□□□ -0.38
SPG7-210ENST00000564409 COX10Q12887 443 aa12.66□□□□□ -0.38
SPG7-210ENST00000564409 Q6ZR03 302 aa12.66□□□□□ -0.38
SPG7-210ENST00000564409 CPLX4Q7Z7G2 160 aa12.66□□□□□ -0.38
SPG7-210ENST00000564409 JAZF1Q86VZ6 243 aa12.66□□□□□ -0.38
SPG7-210ENST00000564409 PGAM4Q8N0Y7 254 aa12.66□□□□□ -0.38
SPG7-210ENST00000564409 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.66□□□□□ -0.38
SPG7-210ENST00000564409 OR8G5Q8NG78 346 aa12.66□□□□□ -0.38
SPG7-210ENST00000564409 OR52J3Q8NH60 311 aa12.66□□□□□ -0.38
SPG7-210ENST00000564409 FANK1Q8TC84 345 aa12.66□□□□□ -0.38
SPG7-210ENST00000564409 POP5Q969H6 163 aaKnown RBP12.66□□□□□ -0.38
SPG7-210ENST00000564409 ZNF582Q96NG8 517 aaPredicted RBP12.66□□□□□ -0.38
SPG7-210ENST00000564409 ERMAPQ96PL5 475 aaPredicted RBP12.66□□□□□ -0.38
SPG7-210ENST00000564409 POFUT1Q9H488 388 aa12.66□□□□□ -0.38
SPG7-210ENST00000564409 PATZ1Q9HBE1 687 aaKnown RBP12.66□□□□□ -0.38
SPG7-210ENST00000564409 NDE1Q9NXR1 346 aa12.66□□□□□ -0.38
SPG7-210ENST00000564409 IL20RAQ9UHF4 553 aa12.66□□□□□ -0.38
SPG7-210ENST00000564409 TMCC3Q9ULS5 477 aa12.66□□□□□ -0.38
SPG7-210ENST00000564409 B9D1Q9UPM9 204 aa12.66□□□□□ -0.38
SPG7-210ENST00000564409 LHFPL6Q9Y693 200 aa12.66□□□□□ -0.38
SPG7-210ENST00000564409 IGLV1-36A0A0B4J1U3 117 aa12.65□□□□□ -0.38
SPG7-210ENST00000564409 KRT36O76013 467 aa12.65□□□□□ -0.38
SPG7-210ENST00000564409 FSHBP01225 129 aa12.65□□□□□ -0.38
SPG7-210ENST00000564409 SEMG1P04279 462 aa12.65□□□□□ -0.38
SPG7-210ENST00000564409 SELEP16581 610 aa12.65□□□□□ -0.38
SPG7-210ENST00000564409 ADRA2CP18825 462 aa12.65□□□□□ -0.38
SPG7-210ENST00000564409 MDH2P40926 338 aaKnown RBP12.65□□□□□ -0.38
SPG7-210ENST00000564409 SLC6A9P48067 706 aa12.65□□□□□ -0.38
SPG7-210ENST00000564409 SRP9P49458 86 aaKnown RBP12.65□□□□□ -0.38
SPG7-210ENST00000564409 LCN2P80188 198 aa12.65□□□□□ -0.38
SPG7-210ENST00000564409 SPIBQ01892 262 aa12.65□□□□□ -0.38
SPG7-210ENST00000564409 RPL13AP3Q6NVV1 102 aa12.65□□□□□ -0.38
SPG7-210ENST00000564409 C1orf94Q6P1W5 598 aa12.65□□□□□ -0.38
SPG7-210ENST00000564409 ZBTB46Q86UZ6 589 aa12.65□□□□□ -0.38
SPG7-210ENST00000564409 BPIFB2Q8N4F0 458 aa12.65□□□□□ -0.38
SPG7-210ENST00000564409 LINC00471Q8N535 108 aa12.65□□□□□ -0.38
SPG7-210ENST00000564409 FAM86B1Q8N7N1 296 aa12.65□□□□□ -0.38
SPG7-210ENST00000564409 SLC26A10Q8NG04 563 aa12.65□□□□□ -0.38
SPG7-210ENST00000564409 ITLN1Q8WWA0 313 aa12.65□□□□□ -0.38
SPG7-210ENST00000564409 SLC7A6Q92536 515 aa12.65□□□□□ -0.38
SPG7-210ENST00000564409 NSMCE2Q96MF7 247 aa12.65□□□□□ -0.38
SPG7-210ENST00000564409 OR2V2Q96R30 315 aa12.65□□□□□ -0.38
SPG7-210ENST00000564409 OR52D1Q9H346 318 aa12.65□□□□□ -0.38
SPG7-210ENST00000564409 NTN4Q9HB63 628 aa12.65□□□□□ -0.38
SPG7-210ENST00000564409 IL1RAPQ9NPH3 570 aa12.65□□□□□ -0.38
SPG7-210ENST00000564409 KCNG2Q9UJ96 466 aa12.65□□□□□ -0.38
SPG7-210ENST00000564409 A8MXK9 166 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 TMEM178BH3BS89 294 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 OR10H3O60404 316 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 DIRAS1O95057 198 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 PPP1R3DO95685 299 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 FABP3P05413 133 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 NOS3P29474 1203 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 CENPAP49450 140 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 ACTG1P63261 375 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 ZNF181Q2M3W8 571 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 SPRNQ5BIV9 151 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 LEG1Q6P5S2 330 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 COLCA1Q6ZS62 124 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 OR6V1Q8N148 313 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 RNF148Q8N7C7 305 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 ATG16L2Q8NAA4 619 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 OR2AJ1Q8NGZ0 328 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 SIGLEC11Q96RL6 698 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 GPA33Q99795 319 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 IFT27Q9BW83 186 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 CDADC1Q9BWV3 514 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 HCAR1Q9BXC0 346 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 SRA1Q9HD15 236 aaKnown RBP12.64□□□□□ -0.39
SPG7-210ENST00000564409 GCM1Q9NP62 436 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 CD300AQ9UGN4 299 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 OPN4Q9UHM6 478 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 LRCH1Q9Y2L9 728 aa12.64□□□□□ -0.39
SPG7-210ENST00000564409 ANK2Q01484 3957 aa12.63□□□□□ -0.39
SPG7-210ENST00000564409 A0A1B0GWJ7 208 aa12.63□□□□□ -0.39
SPG7-210ENST00000564409 TMEM89A2RUT3 159 aa12.63□□□□□ -0.39
SPG7-210ENST00000564409 IQCF6A8MYZ5 107 aa12.63□□□□□ -0.39
SPG7-210ENST00000564409 F5H0A9 414 aaPredicted RBP12.63□□□□□ -0.39
SPG7-210ENST00000564409 DCTN6O00399 190 aa12.63□□□□□ -0.39
SPG7-210ENST00000564409 DBHP09172 617 aa12.63□□□□□ -0.39
SPG7-210ENST00000564409 HIST1H1CP16403 213 aaKnown RBP12.63□□□□□ -0.39
SPG7-210ENST00000564409 GSSP48637 474 aa12.63□□□□□ -0.39
SPG7-210ENST00000564409 MNAT1P51948 309 aa12.63□□□□□ -0.39
SPG7-210ENST00000564409 TSPAN31Q12999 210 aa12.63□□□□□ -0.39
SPG7-210ENST00000564409 ZMYND11Q15326 602 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms