RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 TIMM10BQ9Y5J6 103 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 R4GMQ9 66 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 HEATR1Q9H583 2144 aaKnown RBP8.88□□□□□ -0.99
SMG1-208ENST00000563448 ZNF701M0R085 212 aaPredicted RBP8.88□□□□□ -0.99
SMG1-208ENST00000563448 SYNGR3O43761 229 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 DOK2O60496 412 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 RAD51DO75771 328 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 HLA-HP01893 362 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 CD1AP06126 327 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 PSMA1P25786 263 aaKnown RBP8.88□□□□□ -0.99
SMG1-208ENST00000563448 OPRM1P35372 400 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 KIR3DL2P43630 455 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 GRB2P62993 217 aaKnown RBP8.88□□□□□ -0.99
SMG1-208ENST00000563448 TUBA1BP68363 451 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 FABP5Q01469 135 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 MRPL49Q13405 166 aaKnown RBP8.88□□□□□ -0.99
SMG1-208ENST00000563448 RAB35Q15286 201 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 TAF13Q15543 124 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 TBRG1Q3YBR2 411 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 SLC36A2Q495M3 483 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 SOWAHCQ53LP3 525 aaPredicted RBP8.88□□□□□ -0.99
SMG1-208ENST00000563448 WDR38Q5JTN6 314 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 BEND4Q6ZU67 534 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 TUBA1AQ71U36 451 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 CATSPERDQ86XM0 798 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 RAB2BQ8WUD1 216 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 SLC7A6Q92536 515 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 GHSRQ92847 366 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 C4orf45Q96LM5 186 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 DCLRE1CQ96SD1 692 aaKnown RBP8.88□□□□□ -0.99
SMG1-208ENST00000563448 KCNJ15Q99712 375 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 PDCD1LG2Q9BQ51 273 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 CHCHD6Q9BRQ6 235 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 TMED9Q9BVK6 235 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 RNF167Q9H6Y7 350 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 NOX3Q9HBY0 568 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 G6PC2Q9NQR9 355 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 FAM206AQ9NX38 181 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 SLC22A13Q9Y226 551 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 OSGIN2Q9Y236 505 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 PRR14LQ5THK1 2151 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 OR6C6A6NF89 314 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 OR4C45A6NMZ5 311 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 ATE1O95260 518 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 CD53P19397 219 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 BMP5P22003 454 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 HSD11B1P28845 292 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 CCR9P51686 369 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 PRKXP51817 358 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 VBP1P61758 197 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 PABPC1L2AQ5JQF8 200 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 TMEM211Q6ICI0 200 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 CD200R1LQ6Q8B3 271 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 CXorf67Q86X51 503 aaPredicted RBP8.87□□□□□ -0.99
SMG1-208ENST00000563448 LIX1LQ8IVB5 337 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 IL17RDQ8NFM7 739 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 OR13C5Q8NGS8 318 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 OR1F12Q8NHA8 337 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 BOD1Q96IK1 185 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 CENPOQ9BU64 300 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 HDHD2Q9H0R4 259 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 NIPAL2Q9H841 368 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 RNF121Q9H920 327 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 B3GNT2Q9NY97 397 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 ZNF629Q9UEG4 869 aaPredicted RBP8.87□□□□□ -0.99
SMG1-208ENST00000563448 POLEQ07864 2286 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 ESPL1Q14674 2120 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 LOC100506127A0A0U1RQW1 187 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 TMEM269A0A1B0GVZ9 245 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 TRDV1A0A1B0GX56 115 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 CIB4A0PJX0 185 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 GABRPO00591 440 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 DVL2O14641 736 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 MSTNO14793 375 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 NOL3O60936 208 aaKnown RBP8.87□□□□□ -0.99
SMG1-208ENST00000563448 ZFPL1O95159 310 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 DBHP09172 617 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 CD79AP11912 226 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 CRYGSP22914 178 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 ANOS1P23352 680 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 OTX1P32242 354 aaPredicted RBP8.87□□□□□ -0.99
SMG1-208ENST00000563448 CX3CR1P49238 355 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 MMP16P51512 607 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 CASP6P55212 293 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 NCS1P62166 190 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 RPS11P62280 158 aaKnown RBP eCLIP8.87□□□□□ -0.99
SMG1-208ENST00000563448 RAB1AP62820 205 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 TGFBR3Q03167 851 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 INSL4Q14641 139 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 CNPY1Q3B7I2 92 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 KRTAP27-1Q3LI81 207 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 TMEM91Q6ZNR0 172 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 LUZP2Q86TE4 346 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 NAA40Q86UY6 237 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 RELL2Q8NC24 303 aaPredicted RBP8.87□□□□□ -0.99
SMG1-208ENST00000563448 RGP1Q92546 391 aaPredicted RBP8.87□□□□□ -0.99
SMG1-208ENST00000563448 COQ7Q99807 217 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 BCL7BQ9BQE9 202 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 HDHD5Q9BXW7 423 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 PIGMQ9H3S5 423 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms