RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 STPG2Q8N412 459 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 CBR4Q8N4T8 237 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 OR5AR1Q8NGP9 310 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 OR10J6PQ8NGY7 276 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 BAALCQ8WXS3 180 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 TFGQ92734 400 aaPredicted RBP2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 TOP1MTQ969P6 601 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 LRRC39Q96DD0 335 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 RNF185Q96GF1 192 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 SCGB3A2Q96PL1 93 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 TSSK3Q96PN8 268 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 PLA2G2FQ9BZM2 168 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 XKR8Q9H6D3 395 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 NTN4Q9HB63 628 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 MTFP1Q9UDX5 166 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 NUFIP1Q9UHK0 495 aaKnown RBP2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 TP53TG5Q9Y2B4 290 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 CACNG2Q9Y698 323 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 UNC13AQ9UPW8 1703 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 MROH5Q6ZUA9 1318 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 LINC00854A0A1B0GVQ3 168 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 WI2-2373I1.2A0A1W2PRP0 233 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 PLAC8L1A1L4L8 177 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 LAD1O00515 517 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 ENTPD5O75356 428 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 E2F6O75461 281 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 RAB3DO95716 219 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 PTTG1O95997 202 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 IGLV2-23P01705 113 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 BGLAPP02818 100 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 CATP04040 527 aaKnown RBP2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 PNMA6AP0CW24 399 aaPredicted RBP2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 CT45A6P0DMU7 189 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 CT45A5P0DMU8 189 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 CT45A7P0DMV0 189 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 CD37P11049 281 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 CRISP2P16562 243 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 PSMC3P17980 439 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 RAB4AP20338 218 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 F2RP25116 425 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 CRISP3P54108 245 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 CDH17Q12864 832 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 SLC39A6Q13433 755 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 CAPRIN1Q14444 709 aaKnown RBP2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 SYCP1Q15431 976 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 POU2AF1Q16633 256 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 C2orf83Q53S99 150 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 CT45A1Q5HYN5 189 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 GCSAMLQ5JQS6 135 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 METTL21CQ5VZV1 264 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 ABHD12BQ7Z5M8 362 aaPredicted RBP2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 KRTAP11-1Q8IUC1 163 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 APRG1Q8IVJ8 170 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 ARHGAP18Q8N392 663 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 CHST4Q8NCG5 386 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 CT45A3Q8NHU0 189 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 C17orf50Q8WW18 174 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 GIMAP1Q8WWP7 306 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 CACNG8Q8WXS5 425 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 RPEQ96AT9 228 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 TAAR1Q96RJ0 339 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 HINT2Q9BX68 163 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 SLC25A2Q9BXI2 301 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 BEX2Q9BXY8 128 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 SPNS1Q9H2V7 528 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 GAL3ST2Q9H3Q3 398 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 ASB8Q9H765 288 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 SYNDIG1Q9H7V2 258 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 CLN6Q9NWW5 311 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 ZNF223Q9UK11 482 aaPredicted RBP2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 CFAP45Q9UL16 551 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 UBIAD1Q9Y5Z9 338 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 SAR1BQ9Y6B6 198 aa2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 TET2Q6N021 2002 aaPredicted RBP2.18□□□□□ -2.06
SHCBP1-202ENST00000563219 COL16A1Q07092 1604 aaPredicted RBP2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 LTBP1Q14766 1721 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 SMIM26A0A096LP01 95 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 TRAV39A0A0B4J263 110 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 CENPXA8MT69 81 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 VGLL3A8MV65 326 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 H7C0C1 242 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 XRCC2O43543 280 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 CHMP2AO43633 222 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 SLC25A27O95847 323 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 USF1P22415 310 aaPredicted RBP2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 CCNE1P24864 410 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 LONP1P36776 959 aaKnown RBP2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 TNFSF9P41273 254 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 CSNK1A1P48729 337 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 UBE2AP49459 152 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 LHX2P50458 406 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 NDUFA8P51970 172 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 ZNF136P52737 540 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 CDKN2DP55273 166 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 PPP1CBP62140 327 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 RPS23P62266 143 aaKnown RBP2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 SEMG2Q02383 582 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 CKAP4Q07065 602 aaKnown RBP2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 SLAQ13239 276 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 ART3Q13508 389 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms