RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 LIPCP11150 499 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 GTF2F2P13984 249 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 CPEP16870 476 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 ZNF17P17021 662 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 MLF1P58340 268 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 SKP2Q13309 424 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 PEA15Q15121 130 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 CHRFAM7AQ494W8 412 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 SLC25A30Q5SVS4 291 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 SLC16A13Q7RTY0 426 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 DCXRQ7Z4W1 244 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 ADGRG3Q86Y34 549 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 MKXQ8IYA7 352 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 ZNF680Q8NEM1 530 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 NOXO1Q8NFA2 376 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 OR56B2PQ8NGI1 322 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 NINJ1Q92982 152 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 PTDSS2Q9BVG9 487 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 SF3B5Q9BWJ5 86 aaKnown RBP6.81□□□□□ -1.32
TCF4-216ENST00000562680 NDUFB11Q9NX14 153 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 B9D1Q9UPM9 204 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 NCOR1O75376 2440 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 ANKRD36A6QL64 1941 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 SMIM30A4D0T7 59 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 PRR33A8MZF0 331 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 ABHD16AO95870 558 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 MYBPHQ13203 477 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 ZMAT1Q5H9K5 638 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 TMEM81Q6P7N7 255 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 NPSR1Q6W5P4 371 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 FAM57BQ71RH2 274 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 TMEM105Q8N8V8 129 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 OR52H1Q8NGJ2 320 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 TMEM106AQ96A25 262 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 FBXO34Q9NWN3 711 aa6.81□□□□□ -1.32
TCF4-216ENST00000562680 KANTRA0A1W2PQU2 76 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 EEF1E1O43324 174 aaKnown RBP6.8□□□□□ -1.32
TCF4-216ENST00000562680 DIRAS3O95661 229 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 CSF1P09603 554 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 ARSBP15848 533 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 RBP2P50120 134 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 CNIH2Q6PI25 160 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 C9orf40Q8IXQ3 194 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 SLC24A4Q8NFF2 622 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 OR52N5Q8NH56 324 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 CHIAQ9BZP6 476 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 GLRX2Q9NS18 164 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 LUZP4Q9P127 313 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 RP1L1Q8IWN7 2480 aaPredicted RBP6.8□□□□□ -1.32
TCF4-216ENST00000562680 ANAPC1Q9H1A4 1944 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 A0A1B0GV90 55 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 PLSCR5A0PG75 271 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 H3BSH0 61 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 ACTL6AO96019 429 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 BMP4P12644 408 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 SELEP16581 610 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 RPS25P62851 125 aaKnown RBP6.8□□□□□ -1.32
TCF4-216ENST00000562680 NTRK2Q16620 822 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 GXYLT1Q4G148 440 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 KRBOX4Q5JUW0 171 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 ZNF684Q5T5D7 378 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 SLC22A24Q8N4F4 322 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 TMEM99Q8N816 258 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 NAXEQ8NCW5 288 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 RNF32Q9H0A6 362 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 GPR27Q9NS67 375 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 HAO2Q9NYQ3 351 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 SLC22A20A6NK97 555 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 SELENOFO60613 162 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 CBR1P16152 277 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 ZNF25P17030 456 aaPredicted RBP6.8□□□□□ -1.32
TCF4-216ENST00000562680 AMY2BP19961 511 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 RAC3P60763 192 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 BLOC1S1P78537 153 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 DUSP2Q05923 314 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 DCAF10Q5QP82 559 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 RNLSQ5VYX0 342 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 C17orf107Q6ZR85 190 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 BEST3Q8N1M1 668 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 KCNG3Q8TAE7 436 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 C2CD4CQ8TF44 421 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 UBE2FQ969M7 185 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 KTI12Q96EK9 354 aaPredicted RBP6.8□□□□□ -1.32
TCF4-216ENST00000562680 AP1S3Q96PC3 154 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 ZNF442Q9H7R0 627 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 GALNT9Q9HCQ5 603 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 DSPPQ9NZW4 1301 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 DCDC2BA2VCK2 349 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 LEUTXA8MZ59 168 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 DOK2O60496 412 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 F10P00742 488 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 NKX6-1P78426 367 aaPredicted RBP6.8□□□□□ -1.32
TCF4-216ENST00000562680 MEF2DQ14814 521 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 TBC1D28Q2M2D7 210 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 NKAPLQ5M9Q1 402 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 FJX1Q86VR8 437 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 SLAMF6Q96DU3 332 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 MFFQ9GZY8 342 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 TMPRSS5Q9H3S3 457 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 KCNIP1Q9NZI2 227 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms