RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 TIGD4Q8IY51 512 aa14.35□□□□□ -0.11
CLK3-207ENST00000562389 WFDC11Q8NEX6 87 aa14.35□□□□□ -0.11
CLK3-207ENST00000562389 OR10S1Q8NGN2 331 aa14.35□□□□□ -0.11
CLK3-207ENST00000562389 SYNPRQ8TBG9 265 aa14.35□□□□□ -0.11
CLK3-207ENST00000562389 TMEM163Q8TC26 289 aa14.35□□□□□ -0.11
CLK3-207ENST00000562389 ZMYND19Q96E35 227 aaPredicted RBP14.35□□□□□ -0.11
CLK3-207ENST00000562389 MARS2Q96GW9 593 aaKnown RBP14.35□□□□□ -0.11
CLK3-207ENST00000562389 TUBG2Q9NRH3 451 aa14.35□□□□□ -0.11
CLK3-207ENST00000562389 DDX28Q9NUL7 540 aaKnown RBP14.35□□□□□ -0.11
CLK3-207ENST00000562389 MYEF2Q9P2K5 600 aaKnown RBP14.35□□□□□ -0.11
CLK3-207ENST00000562389 FZR1Q9UM11 496 aa14.35□□□□□ -0.11
CLK3-207ENST00000562389 GRIP1Q9Y3R0 1128 aa14.35□□□□□ -0.11
CLK3-207ENST00000562389 OTOGQ6ZRI0 2925 aa14.35□□□□□ -0.11
CLK3-207ENST00000562389 M0R233 179 aa14.34□□□□□ -0.11
CLK3-207ENST00000562389 KLF3P57682 345 aaPredicted RBP14.34□□□□□ -0.11
CLK3-207ENST00000562389 SELENOVP59797 346 aa14.34□□□□□ -0.11
CLK3-207ENST00000562389 RPS7P62081 194 aaKnown RBP14.34□□□□□ -0.11
CLK3-207ENST00000562389 APOFQ13790 326 aa14.34□□□□□ -0.11
CLK3-207ENST00000562389 ZNF718Q3SXZ3 478 aa14.34□□□□□ -0.11
CLK3-207ENST00000562389 SHFQ7M4L6 423 aa14.34□□□□□ -0.11
CLK3-207ENST00000562389 TCEANCQ8N8B7 351 aa14.34□□□□□ -0.11
CLK3-207ENST00000562389 OR6N2Q8NGY6 317 aa14.34□□□□□ -0.11
CLK3-207ENST00000562389 SLC25A40Q8TBP6 338 aa14.34□□□□□ -0.11
CLK3-207ENST00000562389 ST7LQ8TDW4 575 aa14.34□□□□□ -0.11
CLK3-207ENST00000562389 COG8Q96MW5 612 aa14.34□□□□□ -0.11
CLK3-207ENST00000562389 SORCS2Q96PQ0 1159 aa14.34□□□□□ -0.11
CLK3-207ENST00000562389 OR2J1Q9GZK6 312 aa14.34□□□□□ -0.11
CLK3-207ENST00000562389 DYNLRB1Q9NP97 96 aa14.34□□□□□ -0.11
CLK3-207ENST00000562389 DUSP13Q9UII6 198 aa14.34□□□□□ -0.11
CLK3-207ENST00000562389 CHD3Q12873 2000 aaKnown RBP14.33□□□□□ -0.12
CLK3-207ENST00000562389 A0A1W2PPW3 197 aa14.33□□□□□ -0.12
CLK3-207ENST00000562389 CCDC182A6NF36 153 aa14.33□□□□□ -0.12
CLK3-207ENST00000562389 E9PQ18 207 aa14.33□□□□□ -0.12
CLK3-207ENST00000562389 M0R129 80 aa14.33□□□□□ -0.12
CLK3-207ENST00000562389 TLX2O43763 284 aaPredicted RBP14.33□□□□□ -0.12
CLK3-207ENST00000562389 CLPTM1O96005 669 aa14.33□□□□□ -0.12
CLK3-207ENST00000562389 IGHV3-13P01766 116 aa14.33□□□□□ -0.12
CLK3-207ENST00000562389 GCH1P30793 250 aa14.33□□□□□ -0.12
CLK3-207ENST00000562389 EFNA4P52798 201 aa14.33□□□□□ -0.12
CLK3-207ENST00000562389 NUDT6P53370 316 aa14.33□□□□□ -0.12
CLK3-207ENST00000562389 EIF2B1Q14232 305 aaKnown RBP14.33□□□□□ -0.12
CLK3-207ENST00000562389 RSPO1Q2MKA7 263 aaPredicted RBP14.33□□□□□ -0.12
CLK3-207ENST00000562389 SPATA46Q5T0L3 261 aa14.33□□□□□ -0.12
CLK3-207ENST00000562389 LCN1P1Q5VSP4 162 aa14.33□□□□□ -0.12
CLK3-207ENST00000562389 NXNL2Q5VZ03 156 aa14.33□□□□□ -0.12
CLK3-207ENST00000562389 ZBTB49Q6ZSB9 765 aa14.33□□□□□ -0.12
CLK3-207ENST00000562389 DPY19L4Q7Z388 723 aa14.33□□□□□ -0.12
CLK3-207ENST00000562389 KLF14Q8TD94 323 aaPredicted RBP14.33□□□□□ -0.12
CLK3-207ENST00000562389 EME1Q96AY2 570 aa14.33□□□□□ -0.12
CLK3-207ENST00000562389 SLC29A1Q99808 456 aa14.33□□□□□ -0.12
CLK3-207ENST00000562389 VRK1Q99986 396 aaPredicted RBP14.33□□□□□ -0.12
CLK3-207ENST00000562389 SLCO1C1Q9NYB5 712 aa14.33□□□□□ -0.12
CLK3-207ENST00000562389 ERICH4A6NGS2 130 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 ZNF878C9JN71 531 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 SELENOFO60613 162 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 F12P00748 615 aaPredicted RBP14.32□□□□□ -0.12
CLK3-207ENST00000562389 ADRA2AP08913 450 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 ACSM4P0C7M7 580 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 ANPEPP15144 967 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 OTX1P32242 354 aaPredicted RBP14.32□□□□□ -0.12
CLK3-207ENST00000562389 MPV17P39210 176 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 ALDH3B1P43353 468 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 CDC42P60953 191 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 RCN1Q15293 331 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 MOGQ16653 247 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 AADACL4Q5VUY2 407 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 DNM1P46Q6ZS02 220 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 COLCA1Q6ZS62 124 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 GID4Q8IVV7 300 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 SPTSSAQ969W0 71 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 APOBEC3DQ96AK3 386 aaPredicted RBP14.32□□□□□ -0.12
CLK3-207ENST00000562389 SLAMF6Q96DU3 332 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 HRASLS5Q96KN8 279 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 Q96MF0 132 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 TEAD3Q99594 435 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 C1QTNF5Q9BXJ0 243 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 RAB1BQ9H0U4 201 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 MS4A5Q9H3V2 200 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 POFUT1Q9H488 388 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 TAAR3PQ9P1P4 343 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 GPR160Q9UJ42 338 aa14.32□□□□□ -0.12
CLK3-207ENST00000562389 F5H5K5 113 aa14.31□□□□□ -0.12
CLK3-207ENST00000562389 M0R135 149 aa14.31□□□□□ -0.12
CLK3-207ENST00000562389 ERCC1P07992 297 aaPredicted RBP14.31□□□□□ -0.12
CLK3-207ENST00000562389 TPTEP56180 551 aa14.31□□□□□ -0.12
CLK3-207ENST00000562389 GGTLC2Q14390 218 aa14.31□□□□□ -0.12
CLK3-207ENST00000562389 MAD2L1BPQ15013 274 aaPredicted RBP14.31□□□□□ -0.12
CLK3-207ENST00000562389 NKPD1Q17RQ9 610 aa14.31□□□□□ -0.12
CLK3-207ENST00000562389 CLEC12BQ2HXU8 276 aa14.31□□□□□ -0.12
CLK3-207ENST00000562389 ZIK1Q3SY52 487 aaPredicted RBP14.31□□□□□ -0.12
CLK3-207ENST00000562389 TMEM255AQ5JRV8 349 aa14.31□□□□□ -0.12
CLK3-207ENST00000562389 RHOUQ7L0Q8 258 aa14.31□□□□□ -0.12
CLK3-207ENST00000562389 MEPCEQ7L2J0 689 aaKnown RBP14.31□□□□□ -0.12
CLK3-207ENST00000562389 BCDIN3DQ7Z5W3 292 aaKnown RBP14.31□□□□□ -0.12
CLK3-207ENST00000562389 ZNF454Q8N9F8 522 aa14.31□□□□□ -0.12
CLK3-207ENST00000562389 OR5L1Q8NGL2 311 aa14.31□□□□□ -0.12
CLK3-207ENST00000562389 OR8J1Q8NGP2 316 aa14.31□□□□□ -0.12
CLK3-207ENST00000562389 OTOSQ8NHW6 89 aa14.31□□□□□ -0.12
CLK3-207ENST00000562389 RNF133Q8WVZ7 376 aa14.31□□□□□ -0.12
CLK3-207ENST00000562389 NEU4Q8WWR8 484 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms