RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 ERGP11308 486 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 MAGP20916 626 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 DRD5P21918 477 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 IGHV1-2P23083 117 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 RPS3P23396 243 aaKnown RBP eCLIP2.81□□□□□ -1.96
HERC1-215ENST00000561436 PBLDP30039 288 aaPredicted RBP2.81□□□□□ -1.96
HERC1-215ENST00000561436 SSR1P43307 286 aaKnown RBP2.81□□□□□ -1.96
HERC1-215ENST00000561436 KLK7P49862 253 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 P2RY4P51582 365 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 ZNF140P52738 457 aaPredicted RBP2.81□□□□□ -1.96
HERC1-215ENST00000561436 PLA2G16P53816 162 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 HADHBP55084 474 aaKnown RBP2.81□□□□□ -1.96
HERC1-215ENST00000561436 KRTAP10-3P60369 221 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 CXCL6P80162 114 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 CBX1P83916 185 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 VLDLRP98155 873 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 PRDX1Q06830 199 aaKnown RBP2.81□□□□□ -1.96
HERC1-215ENST00000561436 ZNF154Q13106 437 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 RSBN1Q5VWQ0 802 aaPredicted RBP2.81□□□□□ -1.96
HERC1-215ENST00000561436 ZNF57Q68EA5 555 aaPredicted RBP2.81□□□□□ -1.96
HERC1-215ENST00000561436 TMEM225Q6GV28 225 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 SASS6Q6UVJ0 657 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 SCIMPQ6UWF3 145 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 LINC00523Q86TU6 105 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 SERPINA9Q86WD7 417 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 RPS19BP1Q86WX3 136 aaKnown RBP2.81□□□□□ -1.96
HERC1-215ENST00000561436 CDKL3Q8IVW4 592 aaPredicted RBP2.81□□□□□ -1.96
HERC1-215ENST00000561436 C9orf40Q8IXQ3 194 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 ZBED8Q8IZ13 594 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 ZNF525Q8N782 197 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 ZNF540Q8NDQ6 660 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 KLHL30-AS1Q8NEE0 82 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 OR2L3Q8NG85 312 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 OR4K2Q8NGD2 314 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 OR5AR1Q8NGP9 310 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 OR8K3Q8NH51 312 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 TYMSOSQ8TAI1 123 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 TMEM158Q8WZ71 300 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 ANKRD7Q92527 254 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 ELMO1Q92556 727 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 SH3YL1Q96HL8 342 aaPredicted RBP2.81□□□□□ -1.96
HERC1-215ENST00000561436 C7orf34Q96L11 122 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 DPH7Q9BTV6 452 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 DRC3Q9H069 523 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 PCBD2Q9H0N5 130 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 XKR8Q9H6D3 395 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 ZDHHC11Q9H8X9 412 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 ISG20L2Q9H9L3 353 aaKnown RBP2.81□□□□□ -1.96
HERC1-215ENST00000561436 NLE1Q9NVX2 485 aaPredicted RBP2.81□□□□□ -1.96
HERC1-215ENST00000561436 GNG12Q9UBI6 72 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 ZNF629Q9UEG4 869 aaPredicted RBP2.81□□□□□ -1.96
HERC1-215ENST00000561436 MTRF1LQ9UGC7 380 aaKnown RBP2.81□□□□□ -1.96
HERC1-215ENST00000561436 GNPTGQ9UJJ9 305 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 RPH3ALQ9UNE2 315 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 GSTK1Q9Y2Q3 226 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 L3MBTL1Q9Y468 752 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 HEY1Q9Y5J3 304 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 ARL5AQ9Y689 179 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 SLC22A7Q9Y694 548 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 AHCTF1Q8WYP5 2266 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 SPG11Q96JI7 2443 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 USP9YO00507 2555 aaPredicted RBP2.81□□□□□ -1.96
HERC1-215ENST00000561436 GON4LQ3T8J9 2241 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 GABRR3A8MPY1 467 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 H0YGG7 62 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 K7EQM0 130 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 APOC4-APOC2K7ER74 178 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 PRMT5O14744 637 aaPredicted RBP2.8□□□□□ -1.96
HERC1-215ENST00000561436 ZSCAN12O43309 604 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 HCRTR1O43613 425 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 C1orf105O95561 183 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 AGTP01019 485 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 APOC2P02655 101 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 HSMCR30P0CW71 290 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 PGCP20142 388 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 PEBP1P30086 187 aaKnown RBP2.8□□□□□ -1.96
HERC1-215ENST00000561436 CDKN2BP42772 138 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 BDKRB1P46663 353 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 TTPAP49638 278 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 VSX2P58304 361 aaPredicted RBP2.8□□□□□ -1.96
HERC1-215ENST00000561436 MLF1P58340 268 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 RPS15AP62244 130 aaKnown RBP2.8□□□□□ -1.96
HERC1-215ENST00000561436 OC90Q02509 493 aaPredicted RBP2.8□□□□□ -1.96
HERC1-215ENST00000561436 ACVR1Q04771 509 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 BIKQ13323 160 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 ANKDD1AQ495B1 522 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 PAN3Q58A45 887 aaKnown RBP2.8□□□□□ -1.96
HERC1-215ENST00000561436 PVRIGQ6DKI7 326 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 SPINK14Q6IE38 97 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 C4orf22Q6V702 233 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 CYS1Q717R9 158 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 TAS2R42Q7RTR8 314 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 C16orf62Q7Z3J2 963 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 KIAA1328Q86T90 577 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 CRLF3Q8IUI8 442 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 GRAMD2AQ8IUY3 354 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 CCDC50Q8IVM0 306 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 KATNAL2Q8IYT4 538 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 ZNF567Q8N184 647 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 TBC1D19Q8N5T2 526 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms