RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 HMGA2P52926 109 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 DLX1P56177 255 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 RPL38P63173 70 aaKnown RBP4.28□□□□□ -1.72
HERC1-213ENST00000561359 DR1Q01658 176 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 FUT5Q11128 374 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 KLRD1Q13241 179 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 TMED1Q13445 227 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 LRRC75BQ2VPJ9 315 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 MS4A18Q3C1V0 323 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 MRPL2Q5T653 305 aaKnown RBP4.28□□□□□ -1.72
HERC1-213ENST00000561359 HHATQ5VTY9 493 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 IL23RQ5VWK5 629 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 LIPMQ5VYY2 423 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 ARL9Q6T311 187 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 METAP1DQ6UB28 335 aaPredicted RBP4.28□□□□□ -1.72
HERC1-213ENST00000561359 NHLRC1Q6VVB1 395 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 BTN2A1Q7KYR7 527 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 SATL1Q86VE3 508 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 CMTM4Q8IZR5 234 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 CLEC4FQ8N1N0 589 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 Q8N2B8 174 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 PNKDQ8N490 385 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 BEND2Q8NDZ0 799 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 OR10AD1Q8NGE0 317 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 AKR7LQ8NHP1 331 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 RORBQ92753 470 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 TAAR8Q969N4 342 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 POM121L2Q96KW2 1035 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 KCNN2Q9H2S1 579 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 MUC13Q9H3R2 512 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 ELOVL3Q9HB03 270 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 CCNB1IP1Q9NPC3 277 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 ATAD3AQ9NVI7 634 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 RLIMQ9NVW2 624 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 MKS1Q9NXB0 559 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 GLTPQ9NZD2 209 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 CTSZQ9UBR2 303 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 TMCC3Q9ULS5 477 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 SNX24Q9Y343 169 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 KPTNQ9Y664 436 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 ALMS1Q8TCU4 4167 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 F2RL2O00254 374 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 SLC28A1O00337 649 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 EIF3HO15372 352 aaKnown RBP eCLIP4.27□□□□□ -1.73
HERC1-213ENST00000561359 SYNGR1O43759 233 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 AHCYL1O43865 530 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 DNAJC8O75937 253 aaPredicted RBP4.27□□□□□ -1.73
HERC1-213ENST00000561359 ABHD16AO95870 558 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 ECDO95905 644 aaPredicted RBP4.27□□□□□ -1.73
HERC1-213ENST00000561359 ALDOBP05062 364 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 GUSBP08236 651 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 MMP7P09237 267 aaPredicted RBP4.27□□□□□ -1.73
HERC1-213ENST00000561359 SBK3P0C264 359 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 IMPDH1P20839 514 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 RPL3P39023 403 aaKnown RBP4.27□□□□□ -1.73
HERC1-213ENST00000561359 HTR5AP47898 357 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 MECP2P51608 486 aaKnown RBP4.27□□□□□ -1.73
HERC1-213ENST00000561359 BIDP55957 195 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 HBA1P69905 142 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 EGR4Q05215 589 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 PUDPQ08623 228 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 C2orf54Q08AI8 447 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 FOXE3Q13461 319 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 KCNJ8Q15842 424 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 ZNF181Q2M3W8 571 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 TMEM95Q3KNT9 176 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 GALNTL6Q49A17 601 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 RFTN2Q52LD8 501 aaPredicted RBP4.27□□□□□ -1.73
HERC1-213ENST00000561359 FAM69AQ5T7M9 428 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 WDR88Q6ZMY6 472 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 ZCCHC23Q6ZST2 131 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 NET1Q7Z628 596 aaPredicted RBP4.27□□□□□ -1.73
HERC1-213ENST00000561359 CENPVQ7Z7K6 275 aaPredicted RBP4.27□□□□□ -1.73
HERC1-213ENST00000561359 OR5AS1Q8N127 324 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 Q8N1X5 172 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 CCNYL1Q8N7R7 359 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 BOLLQ8N9W6 283 aaKnown RBP4.27□□□□□ -1.73
HERC1-213ENST00000561359 ADPRHL1Q8NDY3 354 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 OR51D1Q8NGF3 324 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 MIPOL1Q8TD10 442 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 ACTRT1Q8TDG2 376 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 C17orf50Q8WW18 174 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 ST8SIA4Q92187 359 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 MYDGFQ969H8 173 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 SLC38A4Q969I6 547 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 FOXRED1Q96CU9 486 aaPredicted RBP4.27□□□□□ -1.73
HERC1-213ENST00000561359 CMBLQ96DG6 245 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 C4orf45Q96LM5 186 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 ZNF649Q9BS31 505 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 CDCA4Q9BXL8 241 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 FUT8Q9BYC5 575 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 PRSS22Q9GZN4 317 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 TBCCD1Q9NVR7 557 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 CHST2Q9Y4C5 530 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 CCL27Q9Y4X3 112 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 SMAD5-AS1Q9Y6J3 95 aa4.27□□□□□ -1.73
HERC1-213ENST00000561359 ABCA13Q86UQ4 5058 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 TRAV36DV7A0A075B6V5 113 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 A0A087WUJ7 227 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 C11orf98E9PRG8 122 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms