RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 MOB1AQ9H8S9 216 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 SP140LQ9H930 580 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 DDX28Q9NUL7 540 aaKnown RBP9.04□□□□□ -0.96
USP3-219ENST00000561326 OR52A1Q9UKL2 312 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 SLC5A6Q9Y289 635 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 OR6C6A6NF89 314 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 TRIM64BA6NI03 449 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 OR4C45A6NMZ5 311 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 ZNF879B4DU55 563 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 GABRPO00591 440 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 ZZEF1O43149 2961 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 ARL6IP5O75915 188 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 ZFPL1O95159 310 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 IL18BPO95998 194 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 GLI4P10075 376 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 CD8BP10966 210 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 CD79AP11912 226 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 ZNF32P17041 273 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 MAPK3P27361 379 aaPredicted RBP9.03□□□□□ -0.96
USP3-219ENST00000561326 OPRM1P35372 400 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 SOX6P35712 828 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 TPTEP56180 551 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 NANOS3P60323 173 aaKnown RBP9.03□□□□□ -0.96
USP3-219ENST00000561326 GALK2Q01415 458 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 PMPCAQ10713 525 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 LY6DQ14210 128 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 SPCS2Q15005 226 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 P2RY6Q15077 328 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 CCDC92Q53HC0 331 aaPredicted RBP9.03□□□□□ -0.96
USP3-219ENST00000561326 TMEM244Q5VVB8 128 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 C22orf42Q6IC83 251 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 BTLAQ7Z6A9 289 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 LUZP2Q86TE4 346 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 CATSPERDQ86XM0 798 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 ZNF283Q8N7M2 679 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 ST6GALNAC3Q8NDV1 305 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 OR10S1Q8NGN2 331 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 OR1K1Q8NGR3 316 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 OR1F12Q8NHA8 337 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 RPS4Y2Q8TD47 263 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 GPR148Q8TDV2 347 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 BCL2L2Q92843 193 aaPredicted RBP9.03□□□□□ -0.96
USP3-219ENST00000561326 STARD4Q96DR4 205 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 C4orf45Q96LM5 186 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 PDCD1LG2Q9BQ51 273 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 DCUN1D5Q9BTE7 237 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 SFXN3Q9BWM7 321 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 OR2H1Q9GZK4 316 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 FAM215AQ9Y5M1 114 aa9.03□□□□□ -0.96
USP3-219ENST00000561326 ESPL1Q14674 2120 aa9.02□□□□□ -0.96
USP3-219ENST00000561326 LAMA5O15230 3695 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 A0A096LPE4 126 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 IQCMA0A1B0GVH7 501 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 A0A1W2PPW3 197 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 A0A1W2PPZ6 126 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 F5H5K5 113 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 SYNGR3O43761 229 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 DOK2O60496 412 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 TNFSF13O75888 250 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 UBL3O95164 117 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 PNPP00491 289 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 IL1AP01583 271 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 ISG15P05161 165 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 CD2P06729 351 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 UBCP0CG48 685 aaKnown RBP9.02□□□□□ -0.97
USP3-219ENST00000561326 COX5BP10606 129 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 ZNF182P17025 639 aaPredicted RBP9.02□□□□□ -0.97
USP3-219ENST00000561326 MYL9P24844 172 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 HOXC12P31275 282 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 CX3CR1P49238 355 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 PRKXP51817 358 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 PSMA6P60900 246 aaKnown RBP9.02□□□□□ -0.97
USP3-219ENST00000561326 UBE2NP61088 152 aaKnown RBP9.02□□□□□ -0.97
USP3-219ENST00000561326 PSG4Q00888 419 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 FOXF2Q12947 444 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 PRR30Q53SZ7 412 aaPredicted RBP9.02□□□□□ -0.97
USP3-219ENST00000561326 WDR38Q5JTN6 314 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 VWA1Q6PCB0 445 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 DRAM2Q6UX65 266 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 UNQ9370/PRO34162Q6UXP9 181 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 C3P1Q6ZMU1 363 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 SEM1Q6ZVN7 128 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 TPRA1Q86W33 373 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 ZNF433Q8N7K0 673 aaPredicted RBP9.02□□□□□ -0.97
USP3-219ENST00000561326 ZNF610Q8N9Z0 462 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 C1orf162Q8NEQ5 155 aaPredicted RBP9.02□□□□□ -0.97
USP3-219ENST00000561326 NDNFQ8TB73 568 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 RNF166Q96A37 237 aaPredicted RBP9.02□□□□□ -0.97
USP3-219ENST00000561326 PGLYRP3Q96LB9 341 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 TSC22D3Q99576 134 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 MED18Q9BUE0 208 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 SLITRK2Q9H156 845 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 PIGMQ9H3S5 423 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 BRD7Q9NPI1 651 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 PNRC2Q9NPJ4 139 aaKnown RBP9.02□□□□□ -0.97
USP3-219ENST00000561326 ZNF629Q9UEG4 869 aaPredicted RBP9.02□□□□□ -0.97
USP3-219ENST00000561326 ATPIF1Q9UII2 106 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 FBXL3Q9UKT7 428 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 HHLA2Q9UM44 414 aa9.02□□□□□ -0.97
USP3-219ENST00000561326 COL6A6A6NMZ7 2263 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms