RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 DBPQ10586 325 aaPredicted RBP13.58□□□□□ -0.24
LMX1B-204ENST00000561065 SPRNQ5BIV9 151 aa13.58□□□□□ -0.24
LMX1B-204ENST00000561065 AVPI1Q5T686 147 aa13.58□□□□□ -0.24
LMX1B-204ENST00000561065 CD300LDQ6UXZ3 194 aa13.58□□□□□ -0.24
LMX1B-204ENST00000561065 PTCHD4Q6ZW05 846 aa13.58□□□□□ -0.24
LMX1B-204ENST00000561065 NPEPL1Q8NDH3 523 aa13.58□□□□□ -0.24
LMX1B-204ENST00000561065 OR10G2Q8NGC3 310 aa13.58□□□□□ -0.24
LMX1B-204ENST00000561065 OR4C15Q8NGM1 316 aa13.58□□□□□ -0.24
LMX1B-204ENST00000561065 ABHD4Q8TB40 342 aa13.58□□□□□ -0.24
LMX1B-204ENST00000561065 KLF14Q8TD94 323 aaPredicted RBP13.58□□□□□ -0.24
LMX1B-204ENST00000561065 SLC7A6OSQ96CW6 309 aaPredicted RBP13.58□□□□□ -0.24
LMX1B-204ENST00000561065 TSSK6Q9BXA6 273 aa13.58□□□□□ -0.24
LMX1B-204ENST00000561065 RPRD1BQ9NQG5 326 aaKnown RBP13.58□□□□□ -0.24
LMX1B-204ENST00000561065 NKIRAS2Q9NYR9 191 aa13.58□□□□□ -0.24
LMX1B-204ENST00000561065 TREM2Q9NZC2 230 aa13.58□□□□□ -0.24
LMX1B-204ENST00000561065 DNAJB9Q9UBS3 223 aa13.58□□□□□ -0.24
LMX1B-204ENST00000561065 POMPQ9Y244 141 aa13.58□□□□□ -0.24
LMX1B-204ENST00000561065 OR6C6A6NF89 314 aa13.57□□□□□ -0.24
LMX1B-204ENST00000561065 RIIAD1A6NNX1 92 aa13.57□□□□□ -0.24
LMX1B-204ENST00000561065 PPIHO43447 177 aaKnown RBP13.57□□□□□ -0.24
LMX1B-204ENST00000561065 DOK2O60496 412 aa13.57□□□□□ -0.24
LMX1B-204ENST00000561065 DEAF1O75398 565 aaPredicted RBP13.57□□□□□ -0.24
LMX1B-204ENST00000561065 IGHV1-46P01743 117 aa13.57□□□□□ -0.24
LMX1B-204ENST00000561065 ANXA8P13928 327 aa13.57□□□□□ -0.24
LMX1B-204ENST00000561065 RBMXP38159 391 aaKnown RBP13.57□□□□□ -0.24
LMX1B-204ENST00000561065 DVL1P1P54792 670 aaPredicted RBP13.57□□□□□ -0.24
LMX1B-204ENST00000561065 LMO4P61968 165 aa13.57□□□□□ -0.24
LMX1B-204ENST00000561065 PPP1CBP62140 327 aa13.57□□□□□ -0.24
LMX1B-204ENST00000561065 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.57□□□□□ -0.24
LMX1B-204ENST00000561065 TSTQ16762 297 aaKnown RBP13.57□□□□□ -0.24
LMX1B-204ENST00000561065 CLEC12AQ5QGZ9 265 aa13.57□□□□□ -0.24
LMX1B-204ENST00000561065 SLC35F1Q5T1Q4 408 aa13.57□□□□□ -0.24
LMX1B-204ENST00000561065 MBNL2Q5VZF2 373 aaKnown RBP13.57□□□□□ -0.24
LMX1B-204ENST00000561065 ZNF770Q6IQ21 691 aaPredicted RBP13.57□□□□□ -0.24
LMX1B-204ENST00000561065 USP51Q70EK9 711 aa13.57□□□□□ -0.24
LMX1B-204ENST00000561065 ZBTB46Q86UZ6 589 aa13.57□□□□□ -0.24
LMX1B-204ENST00000561065 C10orf67Q8IYJ2 551 aa13.57□□□□□ -0.24
LMX1B-204ENST00000561065 ADGRG5Q8IZF4 528 aa13.57□□□□□ -0.24
LMX1B-204ENST00000561065 LNX2Q8N448 690 aa13.57□□□□□ -0.24
LMX1B-204ENST00000561065 OR9Q2Q8NGE9 314 aa13.57□□□□□ -0.24
LMX1B-204ENST00000561065 TEX47Q8TBZ9 253 aa13.57□□□□□ -0.24
LMX1B-204ENST00000561065 DIRC2Q96SL1 478 aa13.57□□□□□ -0.24
LMX1B-204ENST00000561065 HDHD2Q9H0R4 259 aa13.57□□□□□ -0.24
LMX1B-204ENST00000561065 LPAR2Q9HBW0 351 aa13.57□□□□□ -0.24
LMX1B-204ENST00000561065 DECR2Q9NUI1 292 aa13.57□□□□□ -0.24
LMX1B-204ENST00000561065 ASH2LQ9UBL3 628 aa13.57□□□□□ -0.24
LMX1B-204ENST00000561065 H3BN98 237 aa13.56□□□□□ -0.24
LMX1B-204ENST00000561065 TPD52L2O43399 206 aaKnown RBP13.56□□□□□ -0.24
LMX1B-204ENST00000561065 MPZL1O95297 269 aa13.56□□□□□ -0.24
LMX1B-204ENST00000561065 GPANK1O95872 356 aa13.56□□□□□ -0.24
LMX1B-204ENST00000561065 GAAP10253 952 aa13.56□□□□□ -0.24
LMX1B-204ENST00000561065 ZNF3P17036 446 aa13.56□□□□□ -0.24
LMX1B-204ENST00000561065 HNF1AP20823 631 aa13.56□□□□□ -0.24
LMX1B-204ENST00000561065 PAICSP22234 425 aaKnown RBP13.56□□□□□ -0.24
LMX1B-204ENST00000561065 THBS2P35442 1172 aa13.56□□□□□ -0.24
LMX1B-204ENST00000561065 CRYBB2P43320 205 aa13.56□□□□□ -0.24
LMX1B-204ENST00000561065 ZNF81P51508 661 aa13.56□□□□□ -0.24
LMX1B-204ENST00000561065 TMEM33P57088 247 aa13.56□□□□□ -0.24
LMX1B-204ENST00000561065 VASH1Q7L8A9 365 aaPredicted RBP13.56□□□□□ -0.24
LMX1B-204ENST00000561065 OR6V1Q8N148 313 aa13.56□□□□□ -0.24
LMX1B-204ENST00000561065 PROKR2Q8NFJ6 384 aa13.56□□□□□ -0.24
LMX1B-204ENST00000561065 OR1F12Q8NHA8 337 aa13.56□□□□□ -0.24
LMX1B-204ENST00000561065 DNAJC9Q8WXX5 260 aa13.56□□□□□ -0.24
LMX1B-204ENST00000561065 TMEM158Q8WZ71 300 aa13.56□□□□□ -0.24
LMX1B-204ENST00000561065 SLC7A6Q92536 515 aa13.56□□□□□ -0.24
LMX1B-204ENST00000561065 NRBF2Q96F24 287 aa13.56□□□□□ -0.24
LMX1B-204ENST00000561065 EGLN1Q9GZT9 426 aa13.56□□□□□ -0.24
LMX1B-204ENST00000561065 EGLN3Q9H6Z9 239 aa13.56□□□□□ -0.24
LMX1B-204ENST00000561065 SAP30LQ9HAJ7 183 aa13.56□□□□□ -0.24
LMX1B-204ENST00000561065 TMEFF2Q9UIK5 374 aaPredicted RBP13.56□□□□□ -0.24
LMX1B-204ENST00000561065 GRIP1Q9Y3R0 1128 aa13.56□□□□□ -0.24
LMX1B-204ENST00000561065 IGHV1-69-2A0A0G2JMI3 117 aa13.55□□□□□ -0.24
LMX1B-204ENST00000561065 TCRBV3S1A0A5B6 114 aa13.55□□□□□ -0.24
LMX1B-204ENST00000561065 B4DSR2 109 aa13.55□□□□□ -0.24
LMX1B-204ENST00000561065 DCTN6O00399 190 aa13.55□□□□□ -0.24
LMX1B-204ENST00000561065 BHLHE40O14503 412 aa13.55□□□□□ -0.24
LMX1B-204ENST00000561065 SPRY3O43610 288 aa13.55□□□□□ -0.24
LMX1B-204ENST00000561065 CIB2O75838 187 aa13.55□□□□□ -0.24
LMX1B-204ENST00000561065 TFP02787 698 aa13.55□□□□□ -0.24
LMX1B-204ENST00000561065 HMGN1P05114 100 aa13.55□□□□□ -0.24
LMX1B-204ENST00000561065 FMO3P31513 532 aa13.55□□□□□ -0.24
LMX1B-204ENST00000561065 CBX1P83916 185 aa13.55□□□□□ -0.24
LMX1B-204ENST00000561065 MVKQ03426 396 aa13.55□□□□□ -0.24
LMX1B-204ENST00000561065 PAPD5Q8NDF8 572 aaKnown RBP13.55□□□□□ -0.24
LMX1B-204ENST00000561065 SDR9C7Q8NEX9 313 aa13.55□□□□□ -0.24
LMX1B-204ENST00000561065 PTP4A1Q93096 173 aa13.55□□□□□ -0.24
LMX1B-204ENST00000561065 TSSK2Q96PF2 358 aa13.55□□□□□ -0.24
LMX1B-204ENST00000561065 FEVQ99581 238 aa13.55□□□□□ -0.24
LMX1B-204ENST00000561065 COQ7Q99807 217 aa13.55□□□□□ -0.24
LMX1B-204ENST00000561065 CADM1Q9BY67 442 aaKnown RBP13.55□□□□□ -0.24
LMX1B-204ENST00000561065 DCAF16Q9NXF7 216 aa13.55□□□□□ -0.24
LMX1B-204ENST00000561065 PDP1Q9P0J1 537 aaPredicted RBP13.55□□□□□ -0.24
LMX1B-204ENST00000561065 ZDHHC8Q9ULC8 765 aa13.55□□□□□ -0.24
LMX1B-204ENST00000561065 ARHGAP32A7KAX9 2087 aa13.54□□□□□ -0.24
LMX1B-204ENST00000561065 IGLV1-36A0A0B4J1U3 117 aa13.54□□□□□ -0.24
LMX1B-204ENST00000561065 OR6C68A6NDL8 312 aa13.54□□□□□ -0.24
LMX1B-204ENST00000561065 FKBP6O75344 327 aa13.54□□□□□ -0.24
LMX1B-204ENST00000561065 MSMBP08118 114 aa13.54□□□□□ -0.24
LMX1B-204ENST00000561065 TNFSF4P23510 183 aa13.54□□□□□ -0.24
LMX1B-204ENST00000561065 ERFP50548 548 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms