RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 DCTN6O00399 190 aa13.66□□□□□ -0.22
SNX1-213ENST00000561026 GMNNO75496 209 aa13.66□□□□□ -0.22
SNX1-213ENST00000561026 CRABP1P29762 137 aa13.66□□□□□ -0.22
SNX1-213ENST00000561026 PRDX6P30041 224 aa13.66□□□□□ -0.22
SNX1-213ENST00000561026 SLC6A9P48067 706 aa13.66□□□□□ -0.22
SNX1-213ENST00000561026 BTG1P62324 171 aa13.66□□□□□ -0.22
SNX1-213ENST00000561026 HIST1H3AP68431 136 aa13.66□□□□□ -0.22
SNX1-213ENST00000561026 HLXQ14774 488 aaPredicted RBP13.66□□□□□ -0.22
SNX1-213ENST00000561026 ZMYND11Q15326 602 aa13.66□□□□□ -0.22
SNX1-213ENST00000561026 HIST2H3PS2Q5TEC6 136 aa13.66□□□□□ -0.22
SNX1-213ENST00000561026 FBXW12Q6X9E4 464 aa13.66□□□□□ -0.22
SNX1-213ENST00000561026 HIST2H3AQ71DI3 136 aa13.66□□□□□ -0.22
SNX1-213ENST00000561026 BPIFB2Q8N4F0 458 aa13.66□□□□□ -0.22
SNX1-213ENST00000561026 RNF148Q8N7C7 305 aa13.66□□□□□ -0.22
SNX1-213ENST00000561026 GJC3Q8NFK1 279 aa13.66□□□□□ -0.22
SNX1-213ENST00000561026 OR5L1Q8NGL2 311 aa13.66□□□□□ -0.22
SNX1-213ENST00000561026 GCDHQ92947 438 aaPredicted RBP13.66□□□□□ -0.22
SNX1-213ENST00000561026 TSSK2Q96PF2 358 aa13.66□□□□□ -0.22
SNX1-213ENST00000561026 OR2V2Q96R30 315 aa13.66□□□□□ -0.22
SNX1-213ENST00000561026 ELAC2Q9BQ52 826 aaKnown RBP13.66□□□□□ -0.22
SNX1-213ENST00000561026 GORASP2Q9H8Y8 452 aa13.66□□□□□ -0.22
SNX1-213ENST00000561026 PATZ1Q9HBE1 687 aaKnown RBP13.66□□□□□ -0.22
SNX1-213ENST00000561026 MMP26Q9NRE1 261 aa13.66□□□□□ -0.22
SNX1-213ENST00000561026 POLR1DQ9Y2S0 133 aa13.66□□□□□ -0.22
SNX1-213ENST00000561026 POLR3KQ9Y2Y1 108 aaPredicted RBP13.66□□□□□ -0.22
SNX1-213ENST00000561026 TMEM89A2RUT3 159 aa13.65□□□□□ -0.22
SNX1-213ENST00000561026 GPANK1O95872 356 aa13.65□□□□□ -0.22
SNX1-213ENST00000561026 FPR2P25090 351 aa13.65□□□□□ -0.22
SNX1-213ENST00000561026 CENPAP49450 140 aa13.65□□□□□ -0.22
SNX1-213ENST00000561026 SMIM11AP58511 58 aa13.65□□□□□ -0.22
SNX1-213ENST00000561026 MEP1BQ16820 701 aa13.65□□□□□ -0.22
SNX1-213ENST00000561026 SLC27A4Q6P1M0 643 aa13.65□□□□□ -0.22
SNX1-213ENST00000561026 PGM2L1Q6PCE3 622 aa13.65□□□□□ -0.22
SNX1-213ENST00000561026 DNM1P34Q6PK57 102 aa13.65□□□□□ -0.22
SNX1-213ENST00000561026 OR5AS1Q8N127 324 aa13.65□□□□□ -0.22
SNX1-213ENST00000561026 OR6V1Q8N148 313 aa13.65□□□□□ -0.22
SNX1-213ENST00000561026 ATG16L2Q8NAA4 619 aa13.65□□□□□ -0.22
SNX1-213ENST00000561026 DEFB108BQ8NET1 73 aa13.65□□□□□ -0.22
SNX1-213ENST00000561026 DVL3Q92997 716 aaPredicted RBP13.65□□□□□ -0.22
SNX1-213ENST00000561026 APOBEC3DQ96AK3 386 aaPredicted RBP13.65□□□□□ -0.22
SNX1-213ENST00000561026 ERMAPQ96PL5 475 aaPredicted RBP13.65□□□□□ -0.22
SNX1-213ENST00000561026 GCM1Q9NP62 436 aa13.65□□□□□ -0.22
SNX1-213ENST00000561026 LHFPL6Q9Y693 200 aa13.65□□□□□ -0.22
SNX1-213ENST00000561026 IGLV1-36A0A0B4J1U3 117 aa13.64□□□□□ -0.23
SNX1-213ENST00000561026 TRAPPC2LH3BP13 241 aa13.64□□□□□ -0.23
SNX1-213ENST00000561026 TMEM178BH3BS89 294 aa13.64□□□□□ -0.23
SNX1-213ENST00000561026 PPP1R3DO95685 299 aa13.64□□□□□ -0.23
SNX1-213ENST00000561026 COX10Q12887 443 aa13.64□□□□□ -0.23
SNX1-213ENST00000561026 RSPO1Q2MKA7 263 aaPredicted RBP13.64□□□□□ -0.23
SNX1-213ENST00000561026 RFX4Q33E94 735 aa13.64□□□□□ -0.23
SNX1-213ENST00000561026 OR2T2Q6IF00 324 aa13.64□□□□□ -0.23
SNX1-213ENST00000561026 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.64□□□□□ -0.23
SNX1-213ENST00000561026 OR8G5Q8NG78 346 aa13.64□□□□□ -0.23
SNX1-213ENST00000561026 OR13G1Q8NGZ3 307 aa13.64□□□□□ -0.23
SNX1-213ENST00000561026 C22orf15Q8WYQ4 148 aa13.64□□□□□ -0.23
SNX1-213ENST00000561026 PYURFQ96I23 114 aa13.64□□□□□ -0.23
SNX1-213ENST00000561026 ZNF582Q96NG8 517 aaPredicted RBP13.64□□□□□ -0.23
SNX1-213ENST00000561026 COQ7Q99807 217 aa13.64□□□□□ -0.23
SNX1-213ENST00000561026 HDHD2Q9H0R4 259 aa13.64□□□□□ -0.23
SNX1-213ENST00000561026 SRA1Q9HD15 236 aaKnown RBP13.64□□□□□ -0.23
SNX1-213ENST00000561026 ESM1Q9NQ30 184 aa13.64□□□□□ -0.23
SNX1-213ENST00000561026 PTTG3PQ9NZH4 202 aa13.64□□□□□ -0.23
SNX1-213ENST00000561026 B9D1Q9UPM9 204 aa13.64□□□□□ -0.23
SNX1-213ENST00000561026 V9GYQ6 96 aa13.64□□□□□ -0.23
SNX1-213ENST00000561026 IFNL4K9M1U5 179 aa13.63□□□□□ -0.23
SNX1-213ENST00000561026 ARPC3O15145 178 aa13.63□□□□□ -0.23
SNX1-213ENST00000561026 GADD45GO95257 159 aa13.63□□□□□ -0.23
SNX1-213ENST00000561026 SEMG1P04279 462 aa13.63□□□□□ -0.23
SNX1-213ENST00000561026 SLC6A6P31641 620 aa13.63□□□□□ -0.23
SNX1-213ENST00000561026 MDH2P40926 338 aaKnown RBP13.63□□□□□ -0.23
SNX1-213ENST00000561026 MMP16P51512 607 aa13.63□□□□□ -0.23
SNX1-213ENST00000561026 SEC61A1P61619 476 aaKnown RBP13.63□□□□□ -0.23
SNX1-213ENST00000561026 ZNF154Q13106 437 aa13.63□□□□□ -0.23
SNX1-213ENST00000561026 CORO6Q6QEF8 472 aa13.63□□□□□ -0.23
SNX1-213ENST00000561026 COLCA1Q6ZS62 124 aa13.63□□□□□ -0.23
SNX1-213ENST00000561026 JAZF1Q86VZ6 243 aa13.63□□□□□ -0.23
SNX1-213ENST00000561026 ZDHHC22Q8N966 263 aa13.63□□□□□ -0.23
SNX1-213ENST00000561026 SLC26A10Q8NG04 563 aa13.63□□□□□ -0.23
SNX1-213ENST00000561026 FANK1Q8TC84 345 aa13.63□□□□□ -0.23
SNX1-213ENST00000561026 POP5Q969H6 163 aaKnown RBP13.63□□□□□ -0.23
SNX1-213ENST00000561026 NMNAT3Q96T66 252 aa13.63□□□□□ -0.23
SNX1-213ENST00000561026 OR52D1Q9H346 318 aa13.63□□□□□ -0.23
SNX1-213ENST00000561026 NTN4Q9HB63 628 aa13.63□□□□□ -0.23
SNX1-213ENST00000561026 AUP1Q9Y679 476 aa13.63□□□□□ -0.23
SNX1-213ENST00000561026 A8MXK9 166 aa13.62□□□□□ -0.23
SNX1-213ENST00000561026 F5H0A9 414 aaPredicted RBP13.62□□□□□ -0.23
SNX1-213ENST00000561026 HSD17B1P14061 328 aa13.62□□□□□ -0.23
SNX1-213ENST00000561026 HIST1H1CP16403 213 aaKnown RBP13.62□□□□□ -0.23
SNX1-213ENST00000561026 ZNF12P17014 697 aa13.62□□□□□ -0.23
SNX1-213ENST00000561026 FPR3P25089 353 aa13.62□□□□□ -0.23
SNX1-213ENST00000561026 SPIBQ01892 262 aa13.62□□□□□ -0.23
SNX1-213ENST00000561026 TUSC1Q2TAM9 212 aa13.62□□□□□ -0.23
SNX1-213ENST00000561026 KRTAP27-1Q3LI81 207 aa13.62□□□□□ -0.23
SNX1-213ENST00000561026 LEG1Q6P5S2 330 aa13.62□□□□□ -0.23
SNX1-213ENST00000561026 MUC20Q8N307 709 aaPredicted RBP13.62□□□□□ -0.23
SNX1-213ENST00000561026 C3orf56Q8N813 242 aa13.62□□□□□ -0.23
SNX1-213ENST00000561026 OR10AD1Q8NGE0 317 aa13.62□□□□□ -0.23
SNX1-213ENST00000561026 OR4K13Q8NH42 304 aa13.62□□□□□ -0.23
SNX1-213ENST00000561026 MEGF10Q96KG7 1140 aa13.62□□□□□ -0.23
SNX1-213ENST00000561026 SLC30A2Q9BRI3 323 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms