RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 C1orf159Q96HA4 380 aa17.83■□□□□ 0.44
PSEN1-225ENST00000560005 CNN2Q99439 309 aaKnown RBP17.83■□□□□ 0.44
PSEN1-225ENST00000560005 ASB6Q9NWX5 421 aa17.83■□□□□ 0.44
PSEN1-225ENST00000560005 DAPL1A0PJW8 107 aa17.82■□□□□ 0.44
PSEN1-225ENST00000560005 ZNF726A6NNF4 738 aa17.82■□□□□ 0.44
PSEN1-225ENST00000560005 J3QRE1 110 aa17.82■□□□□ 0.44
PSEN1-225ENST00000560005 IGHV1-2P23083 117 aa17.82■□□□□ 0.44
PSEN1-225ENST00000560005 EFNA4P52798 201 aa17.82■□□□□ 0.44
PSEN1-225ENST00000560005 WNT4P56705 351 aa17.82■□□□□ 0.44
PSEN1-225ENST00000560005 HSF2Q03933 536 aa17.82■□□□□ 0.44
PSEN1-225ENST00000560005 MED22Q15528 200 aa17.82■□□□□ 0.44
PSEN1-225ENST00000560005 TIGD6Q17RP2 521 aa17.82■□□□□ 0.44
PSEN1-225ENST00000560005 SSX8Q7RTT4 187 aa17.82■□□□□ 0.44
PSEN1-225ENST00000560005 ZBTB46Q86UZ6 589 aa17.82■□□□□ 0.44
PSEN1-225ENST00000560005 CLVS1Q8IUQ0 354 aaPredicted RBP17.82■□□□□ 0.44
PSEN1-225ENST00000560005 OR4F15Q8NGB8 312 aa17.82■□□□□ 0.44
PSEN1-225ENST00000560005 OR52N1Q8NH53 320 aa17.82■□□□□ 0.44
PSEN1-225ENST00000560005 OR6X1Q8NH79 312 aa17.82■□□□□ 0.44
PSEN1-225ENST00000560005 BCO1Q9HAY6 547 aa17.82■□□□□ 0.44
PSEN1-225ENST00000560005 SRA1Q9HD15 236 aaKnown RBP17.82■□□□□ 0.44
PSEN1-225ENST00000560005 KLHL9Q9P2J3 617 aa17.82■□□□□ 0.44
PSEN1-225ENST00000560005 B3GAT1Q9P2W7 334 aa17.82■□□□□ 0.44
PSEN1-225ENST00000560005 RSL24D1Q9UHA3 163 aaKnown RBP17.82■□□□□ 0.44
PSEN1-225ENST00000560005 ING1Q9UK53 422 aaPredicted RBP17.82■□□□□ 0.44
PSEN1-225ENST00000560005 CAB39Q9Y376 341 aaPredicted RBP17.82■□□□□ 0.44
PSEN1-225ENST00000560005 CEPT1Q9Y6K0 416 aa17.82■□□□□ 0.44
PSEN1-225ENST00000560005 MGAM2Q2M2H8 2515 aa17.82■□□□□ 0.44
PSEN1-225ENST00000560005 SLC22A23A1A5C7 686 aa17.81■□□□□ 0.44
PSEN1-225ENST00000560005 OR5H1A6NKK0 313 aa17.81■□□□□ 0.44
PSEN1-225ENST00000560005 H3BSA7 217 aa17.81■□□□□ 0.44
PSEN1-225ENST00000560005 PTHP01270 115 aa17.81■□□□□ 0.44
PSEN1-225ENST00000560005 IGHG1P01857 330 aa17.81■□□□□ 0.44
PSEN1-225ENST00000560005 LCKP06239 509 aa17.81■□□□□ 0.44
PSEN1-225ENST00000560005 COX5AP20674 150 aa17.81■□□□□ 0.44
PSEN1-225ENST00000560005 CFPP27918 469 aa17.81■□□□□ 0.44
PSEN1-225ENST00000560005 ZNF83P51522 516 aa17.81■□□□□ 0.44
PSEN1-225ENST00000560005 GP2P55259 537 aaKnown RBP17.81■□□□□ 0.44
PSEN1-225ENST00000560005 THEM4Q5T1C6 240 aa17.81■□□□□ 0.44
PSEN1-225ENST00000560005 GPAT4Q86UL3 456 aa17.81■□□□□ 0.44
PSEN1-225ENST00000560005 P2RY8Q86VZ1 359 aa17.81■□□□□ 0.44
PSEN1-225ENST00000560005 KDM8Q8N371 416 aa17.81■□□□□ 0.44
PSEN1-225ENST00000560005 RAB2BQ8WUD1 216 aa17.81■□□□□ 0.44
PSEN1-225ENST00000560005 ZNF775Q96BV0 537 aaPredicted RBP17.81■□□□□ 0.44
PSEN1-225ENST00000560005 SLC25A44Q96H78 314 aaPredicted RBP17.81■□□□□ 0.44
PSEN1-225ENST00000560005 MGLLQ99685 303 aa17.81■□□□□ 0.44
PSEN1-225ENST00000560005 RBM38Q9H0Z9 239 aaKnown RBP17.81■□□□□ 0.44
PSEN1-225ENST00000560005 SYT4Q9H2B2 425 aa17.81■□□□□ 0.44
PSEN1-225ENST00000560005 ADGRL4Q9HBW9 690 aa17.81■□□□□ 0.44
PSEN1-225ENST00000560005 ERVK13-1Q9NX77 482 aa17.81■□□□□ 0.44
PSEN1-225ENST00000560005 B9D1Q9UPM9 204 aa17.81■□□□□ 0.44
PSEN1-225ENST00000560005 TMEM14AQ9Y6G1 99 aa17.81■□□□□ 0.44
PSEN1-225ENST00000560005 C12orf71A8MTZ7 269 aa17.8■□□□□ 0.44
PSEN1-225ENST00000560005 TCF21O43680 179 aa17.8■□□□□ 0.44
PSEN1-225ENST00000560005 GYPBP06028 91 aa17.8■□□□□ 0.44
PSEN1-225ENST00000560005 CLUP10909 449 aa17.8■□□□□ 0.44
PSEN1-225ENST00000560005 CD40P25942 277 aa17.8■□□□□ 0.44
PSEN1-225ENST00000560005 ETV1P50549 477 aa17.8■□□□□ 0.44
PSEN1-225ENST00000560005 BIDP55957 195 aa17.8■□□□□ 0.44
PSEN1-225ENST00000560005 GALEQ14376 348 aa17.8■□□□□ 0.44
PSEN1-225ENST00000560005 GPR107Q5VW38 600 aa17.8■□□□□ 0.44
PSEN1-225ENST00000560005 NHLRC1Q6VVB1 395 aa17.8■□□□□ 0.44
PSEN1-225ENST00000560005 C12orf54Q6X4T0 127 aa17.8■□□□□ 0.44
PSEN1-225ENST00000560005 ANKRD13BQ86YJ7 626 aa17.8■□□□□ 0.44
PSEN1-225ENST00000560005 RFLNBQ8N5W9 214 aa17.8■□□□□ 0.44
PSEN1-225ENST00000560005 OR10H4Q8NGA5 316 aa17.8■□□□□ 0.44
PSEN1-225ENST00000560005 OR6K6Q8NGW6 343 aa17.8■□□□□ 0.44
PSEN1-225ENST00000560005 ZMYND19Q96E35 227 aaPredicted RBP17.8■□□□□ 0.44
PSEN1-225ENST00000560005 YIPF3Q9GZM5 350 aa17.8■□□□□ 0.44
PSEN1-225ENST00000560005 VWC2LB2RUY7 222 aa17.79■□□□□ 0.44
PSEN1-225ENST00000560005 PHYHO14832 338 aa17.79■□□□□ 0.44
PSEN1-225ENST00000560005 TRAF3IP2O43734 574 aaPredicted RBP17.79■□□□□ 0.44
PSEN1-225ENST00000560005 KHDRBS3O75525 346 aaKnown RBP17.79■□□□□ 0.44
PSEN1-225ENST00000560005 LIMS3P0CW19 117 aa17.79■□□□□ 0.44
PSEN1-225ENST00000560005 LIMS4P0CW20 117 aa17.79■□□□□ 0.44
PSEN1-225ENST00000560005 HLA-DOBP13765 273 aa17.79■□□□□ 0.44
PSEN1-225ENST00000560005 PTAFRP25105 342 aa17.79■□□□□ 0.44
PSEN1-225ENST00000560005 ACTA2P62736 377 aa17.79■□□□□ 0.44
PSEN1-225ENST00000560005 ACTG2P63267 376 aa17.79■□□□□ 0.44
PSEN1-225ENST00000560005 GLO1Q04760 184 aa17.79■□□□□ 0.44
PSEN1-225ENST00000560005 MLLT11Q13015 90 aaPredicted RBP17.79■□□□□ 0.44
PSEN1-225ENST00000560005 TIMM50Q3ZCQ8 353 aa17.79■□□□□ 0.44
PSEN1-225ENST00000560005 ARMCX4Q5H9R4 360 aa17.79■□□□□ 0.44
PSEN1-225ENST00000560005 LINC01590Q5TEZ4 76 aa17.79■□□□□ 0.44
PSEN1-225ENST00000560005 ZNF544Q6NX49 715 aa17.79■□□□□ 0.44
PSEN1-225ENST00000560005 SLC16A9Q7RTY1 509 aa17.79■□□□□ 0.44
PSEN1-225ENST00000560005 LSRQ86X29 649 aaPredicted RBP17.79■□□□□ 0.44
PSEN1-225ENST00000560005 ALDH16A1Q8IZ83 802 aa17.79■□□□□ 0.44
PSEN1-225ENST00000560005 OR6V1Q8N148 313 aa17.79■□□□□ 0.44
PSEN1-225ENST00000560005 OR52N5Q8NH56 324 aa17.79■□□□□ 0.44
PSEN1-225ENST00000560005 HAVCR2Q8TDQ0 301 aa17.79■□□□□ 0.44
PSEN1-225ENST00000560005 NUAK2Q9H093 628 aa17.79■□□□□ 0.44
PSEN1-225ENST00000560005 CLEC2DQ9UHP7 191 aa17.79■□□□□ 0.44
PSEN1-225ENST00000560005 LSM2Q9Y333 95 aaKnown RBP17.79■□□□□ 0.44
PSEN1-225ENST00000560005 KCNAB3O43448 404 aa17.78■□□□□ 0.44
PSEN1-225ENST00000560005 SLC16A7O60669 478 aa17.78■□□□□ 0.44
PSEN1-225ENST00000560005 RAD51DO75771 328 aa17.78■□□□□ 0.44
PSEN1-225ENST00000560005 TGFAP01135 160 aa17.78■□□□□ 0.44
PSEN1-225ENST00000560005 SCG5P05408 212 aa17.78■□□□□ 0.44
PSEN1-225ENST00000560005 BMP4P12644 408 aa17.78■□□□□ 0.44
PSEN1-225ENST00000560005 NR4A2P43354 598 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms