RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 JAZF1Q86VZ6 243 aa10.35□□□□□ -0.75
SPG11-219ENST00000559822 LRRC28Q86X40 367 aaPredicted RBP10.35□□□□□ -0.75
SPG11-219ENST00000559822 ATG16L2Q8NAA4 619 aa10.35□□□□□ -0.75
SPG11-219ENST00000559822 OR13G1Q8NGZ3 307 aa10.35□□□□□ -0.75
SPG11-219ENST00000559822 OR52J3Q8NH60 311 aa10.35□□□□□ -0.75
SPG11-219ENST00000559822 ITLN1Q8WWA0 313 aa10.35□□□□□ -0.75
SPG11-219ENST00000559822 POP5Q969H6 163 aaKnown RBP10.35□□□□□ -0.75
SPG11-219ENST00000559822 C7orf34Q96L11 122 aa10.35□□□□□ -0.75
SPG11-219ENST00000559822 ZNF582Q96NG8 517 aaPredicted RBP10.35□□□□□ -0.75
SPG11-219ENST00000559822 ERMAPQ96PL5 475 aaPredicted RBP10.35□□□□□ -0.75
SPG11-219ENST00000559822 ELAC2Q9BQ52 826 aaKnown RBP10.35□□□□□ -0.75
SPG11-219ENST00000559822 MYLK2Q9H1R3 596 aa10.35□□□□□ -0.75
SPG11-219ENST00000559822 POFUT1Q9H488 388 aa10.35□□□□□ -0.75
SPG11-219ENST00000559822 GORASP2Q9H8Y8 452 aa10.35□□□□□ -0.75
SPG11-219ENST00000559822 PATZ1Q9HBE1 687 aaKnown RBP10.35□□□□□ -0.75
SPG11-219ENST00000559822 IL20RAQ9UHF4 553 aa10.35□□□□□ -0.75
SPG11-219ENST00000559822 POLR3KQ9Y2Y1 108 aaPredicted RBP10.35□□□□□ -0.75
SPG11-219ENST00000559822 NBEAL1Q6ZS30 2694 aa10.35□□□□□ -0.75
SPG11-219ENST00000559822 DYSFO75923 2080 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 LRRC30A6NM36 301 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 ARPC3O15145 178 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 RER1O15258 196 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 DIRAS1O95057 198 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 GADD45GO95257 159 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 SELEP16581 610 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 FPR3P25089 353 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 CFPP27918 469 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 NOS3P29474 1203 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 CDKN2AP42771 156 aaKnown RBP10.34□□□□□ -0.75
SPG11-219ENST00000559822 SPIBQ01892 262 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 COX10Q12887 443 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 ECH1Q13011 328 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 SEC23BQ15437 767 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 RFX4Q33E94 735 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 SLC36A3Q495N2 470 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 ESCO2Q56NI9 601 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 SPRNQ5BIV9 151 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 ARMCX4Q5H9R4 360 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 LEG1Q6P5S2 330 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 Q6ZR03 302 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 PTCHD4Q6ZW05 846 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.34□□□□□ -0.75
SPG11-219ENST00000559822 C3orf56Q8N813 242 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 OR8G5Q8NG78 346 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 SLC7A6Q92536 515 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 PYURFQ96I23 114 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 SLC6A7Q99884 636 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 MRI1Q9BV20 369 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 HCAR1Q9BXC0 346 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 OR52D1Q9H346 318 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 DDX28Q9NUL7 540 aaKnown RBP10.34□□□□□ -0.75
SPG11-219ENST00000559822 PTTG3PQ9NZH4 202 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 OR5V1Q9UGF6 321 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 OPN4Q9UHM6 478 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 TMCC3Q9ULS5 477 aa10.34□□□□□ -0.75
SPG11-219ENST00000559822 IGLV1-36A0A0B4J1U3 117 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 TMEM89A2RUT3 159 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 A8MXK9 166 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 TMEM178BH3BS89 294 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 IDH3BO43837 385 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 OR10H3O60404 316 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 PPP1R3DO95685 299 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 FSHBP01225 129 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 DBHP09172 617 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 HSD17B1P14061 328 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 MMP16P51512 607 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 FXYD6P3P58550 94 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 HIST1H3AP68431 136 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 ZMYND11Q15326 602 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 SAMD4BQ5PRF9 694 aaKnown RBP10.33□□□□□ -0.76
SPG11-219ENST00000559822 HIST2H3PS2Q5TEC6 136 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 OR2T2Q6IF00 324 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 HIST2H3AQ71DI3 136 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 C1orf87Q8N0U7 546 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 OR5AS1Q8N127 324 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 RNF148Q8N7C7 305 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 FAM86B1Q8N7N1 296 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 OR2AJ1Q8NGZ0 328 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 NSMCE2Q96MF7 247 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 SIGLEC11Q96RL6 698 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 GPA33Q99795 319 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 FUZQ9BT04 418 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 IFT27Q9BW83 186 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 CDADC1Q9BWV3 514 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 ZMAT3Q9HA38 289 aaKnown RBP10.33□□□□□ -0.76
SPG11-219ENST00000559822 GCM1Q9NP62 436 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 DCAF16Q9NXF7 216 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 NDE1Q9NXR1 346 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 B9D1Q9UPM9 204 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 LRCH1Q9Y2L9 728 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 AUP1Q9Y679 476 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 LHFPL6Q9Y693 200 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 ANK2Q01484 3957 aa10.33□□□□□ -0.76
SPG11-219ENST00000559822 IQCF6A8MYZ5 107 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 F5H0A9 414 aaPredicted RBP10.32□□□□□ -0.76
SPG11-219ENST00000559822 SEMG1P04279 462 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 FABP3P05413 133 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 ZNF12P17014 697 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 ZFP36P26651 326 aaKnown RBP10.32□□□□□ -0.76
SPG11-219ENST00000559822 SLC6A9P48067 706 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms