RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 CDRT4Q8N9R6 151 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 PHYHIPLQ96FC7 376 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 FAM210AQ96ND0 272 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 ZFP3Q96NJ6 502 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 UTP23Q9BRU9 249 aaKnown RBP2.65□□□□□ -1.99
SPG11-218ENST00000559754 TIMM29Q9BSF4 260 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 NAT9Q9BTE0 207 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 HES7Q9BYE0 225 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 PORCNQ9H237 461 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 UBE2ZQ9H832 354 aaPredicted RBP2.65□□□□□ -1.99
SPG11-218ENST00000559754 PDFQ9HBH1 243 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.65□□□□□ -1.99
SPG11-218ENST00000559754 DHRS4-AS1Q9P1J3 65 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 XCL2Q9UBD3 114 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 SHPKQ9UHJ6 478 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 PPIL1Q9Y3C6 166 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 UGT2A1Q9Y4X1 527 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 TSSC4Q9Y5U2 329 aaPredicted RBP2.65□□□□□ -1.99
SPG11-218ENST00000559754 URGCP-MRPS24S4R325 110 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 GAKO14976 1311 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 RALGAPA1Q6GYQ0 2036 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 TRAV39A0A0B4J263 110 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 A0A0G2JLM5 398 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 H0YHG0 523 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 NUPL2O15504 423 aaKnown RBP2.64□□□□□ -1.99
SPG11-218ENST00000559754 B4GALT5O43286 388 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 ALOX12BO75342 701 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 HPRT1P00492 218 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 GLAP06280 429 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 SLC35E2P0CK97 266 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 CALM1P0DP23 149 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 CALM2P0DP24 149 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 CALM3P0DP25 149 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 ZNF19P17023 458 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 PGAM1P18669 254 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 RAB5AP20339 215 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 ZP3P21754 424 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 CSNK1DP48730 415 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 SERPINB8P50452 374 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 ZNF121P58317 390 aaPredicted RBP2.64□□□□□ -1.99
SPG11-218ENST00000559754 SLC39A6Q13433 755 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 PIGHQ14442 188 aaPredicted RBP2.64□□□□□ -1.99
SPG11-218ENST00000559754 GPNMBQ14956 572 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 MAD2L1BPQ15013 274 aaPredicted RBP2.64□□□□□ -1.99
SPG11-218ENST00000559754 OR4D1Q15615 310 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 ZNF79Q15937 498 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 NDUFAF6Q330K2 333 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 ZBED5Q49AG3 693 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 NPSR1Q6W5P4 371 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 PLEKHG7Q6ZR37 379 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 TPGS1Q6ZTW0 290 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 MBOAT2Q6ZWT7 520 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 HORMAD1Q86X24 394 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 CBLN2Q8IUK8 224 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 NKAPP1Q8N9T2 125 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 NECAP1Q8NC96 275 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 OR2L8Q8NGY9 312 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 ANP32BQ92688 251 aaKnown RBP2.64□□□□□ -1.99
SPG11-218ENST00000559754 RCN3Q96D15 328 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 RANBP9Q96S59 729 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 CIB1Q99828 191 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 ZNF251Q9BRH9 671 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 C19orf24Q9BVV8 132 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 UPF3BQ9BZI7 483 aaKnown RBP2.64□□□□□ -1.99
SPG11-218ENST00000559754 CHRNA10Q9GZZ6 450 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 ASB8Q9H765 288 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 Q9UF83 564 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 FLVCR1Q9Y5Y0 555 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 MROH7Q68CQ1 1323 aa2.64□□□□□ -1.99
SPG11-218ENST00000559754 LRRK1Q38SD2 2015 aa2.63□□□□□ -1.99
SPG11-218ENST00000559754 IGKV1D-13A0A0B4J2D9 117 aa2.63□□□□□ -1.99
SPG11-218ENST00000559754 IGHV3-35A0A0C4DH35 117 aa2.63□□□□□ -1.99
SPG11-218ENST00000559754 SEC14L6B5MCN3 397 aa2.63□□□□□ -1.99
SPG11-218ENST00000559754 F8VZ95 297 aa2.63□□□□□ -1.99
SPG11-218ENST00000559754 CLDN34H7C241 214 aa2.63□□□□□ -1.99
SPG11-218ENST00000559754 H7C2Y5 167 aa2.63□□□□□ -1.99
SPG11-218ENST00000559754 K7EMT4 169 aa2.63□□□□□ -1.99
SPG11-218ENST00000559754 NME4O00746 187 aa2.63□□□□□ -1.99
SPG11-218ENST00000559754 DPM1O60762 260 aa2.63□□□□□ -1.99
SPG11-218ENST00000559754 ZNF253O75346 499 aa2.63□□□□□ -1.99
SPG11-218ENST00000559754 SRP72O76094 671 aaKnown RBP2.63□□□□□ -1.99
SPG11-218ENST00000559754 MYO1DO94832 1006 aa2.63□□□□□ -1.99
SPG11-218ENST00000559754 AHSA1O95433 338 aa2.63□□□□□ -1.99
SPG11-218ENST00000559754 IGHV3-48P01763 117 aa2.63□□□□□ -1.99
SPG11-218ENST00000559754 OR8U9P0C7N5 309 aa2.63□□□□□ -1.99
SPG11-218ENST00000559754 IGKV1-13P0DP09 117 aa2.63□□□□□ -1.99
SPG11-218ENST00000559754 IGFBP3P17936 291 aaPredicted RBP2.63□□□□□ -1.99
SPG11-218ENST00000559754 CSNK2A2P19784 350 aaPredicted RBP2.63□□□□□ -1.99
SPG11-218ENST00000559754 MAS1LP35410 378 aa2.63□□□□□ -1.99
SPG11-218ENST00000559754 VDAC2P45880 294 aaPredicted RBP2.63□□□□□ -1.99
SPG11-218ENST00000559754 UBE2G2P60604 165 aa2.63□□□□□ -1.99
SPG11-218ENST00000559754 TGFBR3Q03167 851 aa2.63□□□□□ -1.99
SPG11-218ENST00000559754 C2orf80Q0P641 193 aa2.63□□□□□ -1.99
SPG11-218ENST00000559754 ST3GAL4Q11206 333 aa2.63□□□□□ -1.99
SPG11-218ENST00000559754 ZBTB6Q15916 424 aa2.63□□□□□ -1.99
SPG11-218ENST00000559754 TAL2Q16559 108 aa2.63□□□□□ -1.99
SPG11-218ENST00000559754 KCTD19Q17RG1 926 aaPredicted RBP2.63□□□□□ -1.99
SPG11-218ENST00000559754 CCNJQ5T5M9 372 aa2.63□□□□□ -1.99
SPG11-218ENST00000559754 CPTPQ5TA50 214 aa2.63□□□□□ -1.99
SPG11-218ENST00000559754 PAMR1Q6UXH9 720 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms