RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 C1orf94Q6P1W5 598 aa10.96□□□□□ -0.65
TPM1-220ENST00000559556 LRRN1Q6UXK5 716 aa10.96□□□□□ -0.65
TPM1-220ENST00000559556 ZNF730Q6ZMV8 503 aa10.96□□□□□ -0.65
TPM1-220ENST00000559556 MBOAT2Q6ZWT7 520 aa10.96□□□□□ -0.65
TPM1-220ENST00000559556 KLBQ86Z14 1044 aa10.96□□□□□ -0.65
TPM1-220ENST00000559556 GLB1L2Q8IW92 636 aa10.96□□□□□ -0.65
TPM1-220ENST00000559556 OR8G5Q8NG78 346 aa10.96□□□□□ -0.65
TPM1-220ENST00000559556 OR10AD1Q8NGE0 317 aa10.96□□□□□ -0.65
TPM1-220ENST00000559556 OR1F12Q8NHA8 337 aa10.96□□□□□ -0.65
TPM1-220ENST00000559556 ZNF420Q8TAQ5 688 aaPredicted RBP10.96□□□□□ -0.65
TPM1-220ENST00000559556 MEGF10Q96KG7 1140 aa10.96□□□□□ -0.65
TPM1-220ENST00000559556 MED4Q9NPJ6 270 aa10.96□□□□□ -0.65
TPM1-220ENST00000559556 SAR1AQ9NR31 198 aa10.96□□□□□ -0.65
TPM1-220ENST00000559556 ZNF446Q9NWS9 450 aa10.96□□□□□ -0.65
TPM1-220ENST00000559556 MIOXQ9UGB7 285 aa10.96□□□□□ -0.65
TPM1-220ENST00000559556 TMEM5Q9Y2B1 443 aa10.96□□□□□ -0.65
TPM1-220ENST00000559556 A0A1B0GWJ7 208 aa10.95□□□□□ -0.66
TPM1-220ENST00000559556 MLNRO43193 412 aa10.95□□□□□ -0.66
TPM1-220ENST00000559556 DBHP09172 617 aa10.95□□□□□ -0.66
TPM1-220ENST00000559556 SDHAP31040 664 aa10.95□□□□□ -0.66
TPM1-220ENST00000559556 SRP9P49458 86 aaKnown RBP10.95□□□□□ -0.66
TPM1-220ENST00000559556 GNB2P62879 340 aa10.95□□□□□ -0.66
TPM1-220ENST00000559556 HLXQ14774 488 aaPredicted RBP10.95□□□□□ -0.66
TPM1-220ENST00000559556 KCNMB1Q16558 191 aa10.95□□□□□ -0.66
TPM1-220ENST00000559556 PDLIM3Q53GG5 364 aaPredicted RBP10.95□□□□□ -0.66
TPM1-220ENST00000559556 BTNL3Q6UXE8 466 aa10.95□□□□□ -0.66
TPM1-220ENST00000559556 OR5AS1Q8N127 324 aa10.95□□□□□ -0.66
TPM1-220ENST00000559556 OR5L1Q8NGL2 311 aa10.95□□□□□ -0.66
TPM1-220ENST00000559556 OR13G1Q8NGZ3 307 aa10.95□□□□□ -0.66
TPM1-220ENST00000559556 APOBEC3DQ96AK3 386 aaPredicted RBP10.95□□□□□ -0.66
TPM1-220ENST00000559556 RASD2Q96D21 266 aa10.95□□□□□ -0.66
TPM1-220ENST00000559556 NEIL1Q96FI4 390 aaPredicted RBP10.95□□□□□ -0.66
TPM1-220ENST00000559556 GPX7Q96SL4 187 aaPredicted RBP10.95□□□□□ -0.66
TPM1-220ENST00000559556 TMEM246Q9BRR3 403 aa10.95□□□□□ -0.66
TPM1-220ENST00000559556 NDEL1Q9GZM8 345 aa10.95□□□□□ -0.66
TPM1-220ENST00000559556 SYT4Q9H2B2 425 aa10.95□□□□□ -0.66
TPM1-220ENST00000559556 ANKRD19PQ9H560 264 aa10.95□□□□□ -0.66
TPM1-220ENST00000559556 NMNAT1Q9HAN9 279 aaPredicted RBP10.95□□□□□ -0.66
TPM1-220ENST00000559556 TMEM165Q9HC07 324 aa10.95□□□□□ -0.66
TPM1-220ENST00000559556 PTTG3PQ9NZH4 202 aa10.95□□□□□ -0.66
TPM1-220ENST00000559556 VSX1Q9NZR4 365 aaPredicted RBP10.95□□□□□ -0.66
TPM1-220ENST00000559556 MMP24Q9Y5R2 645 aa10.95□□□□□ -0.66
TPM1-220ENST00000559556 NOTCH3Q9UM47 2321 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 IGHV3OR16-10A0A075B7F0 116 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 IQCF6A8MYZ5 107 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 RER1O15258 196 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 SLC16A7O60669 478 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 SASH3O75995 380 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 NDUFB2O95178 105 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 CYB5R3P00387 301 aaPredicted RBP10.94□□□□□ -0.66
TPM1-220ENST00000559556 MDKP21741 143 aaPredicted RBP10.94□□□□□ -0.66
TPM1-220ENST00000559556 HIST1H3AP68431 136 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 ZNF404Q494X3 552 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 IFI44LQ53G44 452 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 HIST2H3PS2Q5TEC6 136 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 OTPQ5XKR4 325 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 GPR139Q6DWJ6 353 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 OR2T2Q6IF00 324 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 TBPL2Q6SJ96 375 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 HIST2H3AQ71DI3 136 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 ARPINQ7Z6K5 226 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 ADCK1Q86TW2 530 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 POU5F2Q8N7G0 328 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 ATG16L2Q8NAA4 619 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 SLC7A13Q8TCU3 470 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 RAB40AQ8WXH6 277 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 PLEKHA8Q96JA3 519 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 COQ7Q99807 217 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 SLC30A2Q9BRI3 323 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 HDHD2Q9H0R4 259 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 PRDM13Q9H4Q3 707 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 NRIP3Q9NQ35 241 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 CMTM6Q9NX76 183 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 GMPR2Q9P2T1 348 aaKnown RBP10.94□□□□□ -0.66
TPM1-220ENST00000559556 SIGLEC7Q9Y286 467 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 COA3Q9Y2R0 106 aaPredicted RBP10.94□□□□□ -0.66
TPM1-220ENST00000559556 AP3M1Q9Y2T2 418 aa10.94□□□□□ -0.66
TPM1-220ENST00000559556 LOC100653049A0A140TA62 436 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 H0YL77 283 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 IMPA2O14732 288 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 PHYHO14832 338 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 KHDRBS3O75525 346 aaKnown RBP10.93□□□□□ -0.66
TPM1-220ENST00000559556 KRT34O76011 436 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 ZNF205O95201 554 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 ZNF682O95780 498 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 TROVE2P10155 538 aaKnown RBP eCLIP10.93□□□□□ -0.66
TPM1-220ENST00000559556 GATA4P43694 442 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 PITPNBP48739 271 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 OCLNQ16625 522 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 CGB2Q6NT52 195 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 PGM2L1Q6PCE3 622 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 C16orf87Q6PH81 154 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 PTCHD4Q6ZW05 846 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 CBLL1Q75N03 491 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 SPATC1Q76KD6 591 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 NLRC3Q7RTR2 1065 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 MOGAT3Q86VF5 341 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 SLC15A3Q8IY34 581 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 C1orf87Q8N0U7 546 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 BHLHE23Q8NDY6 225 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms