RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 HDHD2Q9H0R4 259 aa12.59□□□□□ -0.39
RPL28-208ENST00000559463 TMEM160Q9NX00 188 aa12.59□□□□□ -0.39
RPL28-208ENST00000559463 KLHL21Q9UJP4 597 aa12.59□□□□□ -0.39
RPL28-208ENST00000559463 STARD10Q9Y365 291 aa12.59□□□□□ -0.39
RPL28-208ENST00000559463 CACNG2Q9Y698 323 aa12.59□□□□□ -0.39
RPL28-208ENST00000559463 IGHV1-69-2A0A0G2JMI3 117 aa12.58□□□□□ -0.4
RPL28-208ENST00000559463 LOC100289279A0A1B0GTE1 492 aa12.58□□□□□ -0.4
RPL28-208ENST00000559463 TCRBV3S1A0A5B6 114 aa12.58□□□□□ -0.4
RPL28-208ENST00000559463 PLSCR5A0PG75 271 aa12.58□□□□□ -0.4
RPL28-208ENST00000559463 DNAJC8O75937 253 aaPredicted RBP12.58□□□□□ -0.4
RPL28-208ENST00000559463 PSKH1P11801 424 aa12.58□□□□□ -0.4
RPL28-208ENST00000559463 GSTM3P21266 225 aa12.58□□□□□ -0.4
RPL28-208ENST00000559463 ERFP50548 548 aa12.58□□□□□ -0.4
RPL28-208ENST00000559463 CCNIQ14094 377 aa12.58□□□□□ -0.4
RPL28-208ENST00000559463 FLOT2Q14254 428 aa12.58□□□□□ -0.4
RPL28-208ENST00000559463 RSPO1Q2MKA7 263 aaPredicted RBP12.58□□□□□ -0.4
RPL28-208ENST00000559463 SPRNQ5BIV9 151 aa12.58□□□□□ -0.4
RPL28-208ENST00000559463 FAM166AQ6J272 317 aa12.58□□□□□ -0.4
RPL28-208ENST00000559463 LYPD4Q6UWN0 246 aa12.58□□□□□ -0.4
RPL28-208ENST00000559463 SLC37A3Q8NCC5 494 aa12.58□□□□□ -0.4
RPL28-208ENST00000559463 HPS1Q92902 700 aa12.58□□□□□ -0.4
RPL28-208ENST00000559463 FEVQ99581 238 aa12.58□□□□□ -0.4
RPL28-208ENST00000559463 RBM4Q9BWF3 364 aaKnown RBP12.58□□□□□ -0.4
RPL28-208ENST00000559463 CADM1Q9BY67 442 aaKnown RBP12.58□□□□□ -0.4
RPL28-208ENST00000559463 NARFLQ9H6Q4 476 aa12.58□□□□□ -0.4
RPL28-208ENST00000559463 SAP30LQ9HAJ7 183 aa12.58□□□□□ -0.4
RPL28-208ENST00000559463 MSL2Q9HCI7 577 aa12.58□□□□□ -0.4
RPL28-208ENST00000559463 PNRC2Q9NPJ4 139 aaKnown RBP12.58□□□□□ -0.4
RPL28-208ENST00000559463 CYB5R1Q9UHQ9 305 aa12.58□□□□□ -0.4
RPL28-208ENST00000559463 PURGQ9UJV8 347 aaKnown RBP12.58□□□□□ -0.4
RPL28-208ENST00000559463 POMPQ9Y244 141 aa12.58□□□□□ -0.4
RPL28-208ENST00000559463 ARRDC5A6NEK1 342 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 PPIHO43447 177 aaKnown RBP12.57□□□□□ -0.4
RPL28-208ENST00000559463 TIMM8AO60220 97 aaPredicted RBP12.57□□□□□ -0.4
RPL28-208ENST00000559463 LMX1BO60663 402 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 HLA-DQA2P01906 255 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 ADH4P08319 380 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 KITLGP21583 273 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 CRYBB2P43320 205 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 TMEM33P57088 247 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 BNIP1Q12981 228 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 HNRNPA0Q13151 305 aaKnown RBP12.57□□□□□ -0.4
RPL28-208ENST00000559463 CRMP1Q14194 572 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 GK3PQ14409 553 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 HLXQ14774 488 aaPredicted RBP12.57□□□□□ -0.4
RPL28-208ENST00000559463 CHRFAM7AQ494W8 412 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 SLC36A3Q495N2 470 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 FAM209AQ5JX71 171 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 CD300LDQ6UXZ3 194 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 Q6ZR03 302 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 USP51Q70EK9 711 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 SPATA24Q86W54 205 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 HS3ST5Q8IZT8 346 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 PROKR2Q8NFJ6 384 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 OR2T33Q8NG76 320 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 OR51L1Q8NGJ5 315 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 OR9Q1Q8NGQ5 310 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 CLDND2Q8NHS1 167 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 GIPC3Q8TF64 312 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 SLCO4A1Q96BD0 722 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 CMBLQ96DG6 245 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 C1orf159Q96HA4 380 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 MAP6Q96JE9 813 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 DCLRE1CQ96SD1 692 aaKnown RBP12.57□□□□□ -0.4
RPL28-208ENST00000559463 NMNAT2Q9BZQ4 307 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 CYSLTR2Q9NS75 346 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 DECR2Q9NUI1 292 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 CGGBP1Q9UFW8 167 aaPredicted RBP12.57□□□□□ -0.4
RPL28-208ENST00000559463 KCNS2Q9ULS6 477 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 BAIAP2Q9UQB8 552 aa12.57□□□□□ -0.4
RPL28-208ENST00000559463 TVP23AA6NH52 213 aa12.56□□□□□ -0.4
RPL28-208ENST00000559463 J3QW42 95 aa12.56□□□□□ -0.4
RPL28-208ENST00000559463 TPD52L2O43399 206 aaKnown RBP12.56□□□□□ -0.4
RPL28-208ENST00000559463 TGFAP01135 160 aa12.56□□□□□ -0.4
RPL28-208ENST00000559463 GYPBP06028 91 aa12.56□□□□□ -0.4
RPL28-208ENST00000559463 CD55P08174 381 aa12.56□□□□□ -0.4
RPL28-208ENST00000559463 TUBG1P23258 451 aa12.56□□□□□ -0.4
RPL28-208ENST00000559463 LIPAP38571 399 aa12.56□□□□□ -0.4
RPL28-208ENST00000559463 RPS27P42677 84 aaKnown RBP12.56□□□□□ -0.4
RPL28-208ENST00000559463 RGS6P49758 472 aa12.56□□□□□ -0.4
RPL28-208ENST00000559463 CDH15P55291 814 aa12.56□□□□□ -0.4
RPL28-208ENST00000559463 CDK5R2Q13319 367 aa12.56□□□□□ -0.4
RPL28-208ENST00000559463 IQCF1Q8N6M8 205 aa12.56□□□□□ -0.4
RPL28-208ENST00000559463 OR10S1Q8NGN2 331 aa12.56□□□□□ -0.4
RPL28-208ENST00000559463 OR2T4Q8NH00 348 aa12.56□□□□□ -0.4
RPL28-208ENST00000559463 HAVCR1Q96D42 359 aa12.56□□□□□ -0.4
RPL28-208ENST00000559463 ATF6BQ99941 703 aa12.56□□□□□ -0.4
RPL28-208ENST00000559463 TUBG2Q9NRH3 451 aa12.56□□□□□ -0.4
RPL28-208ENST00000559463 PTTG3PQ9NZH4 202 aa12.56□□□□□ -0.4
RPL28-208ENST00000559463 CDC42EP3Q9UKI2 254 aa12.56□□□□□ -0.4
RPL28-208ENST00000559463 ZDHHC8Q9ULC8 765 aa12.56□□□□□ -0.4
RPL28-208ENST00000559463 COMMD3-BMI1R4GMX3 469 aa12.56□□□□□ -0.4
RPL28-208ENST00000559463 GSC2O15499 205 aa12.55□□□□□ -0.4
RPL28-208ENST00000559463 FKBP6O75344 327 aa12.55□□□□□ -0.4
RPL28-208ENST00000559463 ACSM4P0C7M7 580 aa12.55□□□□□ -0.4
RPL28-208ENST00000559463 CLUP10909 449 aa12.55□□□□□ -0.4
RPL28-208ENST00000559463 HOXB6P17509 224 aaKnown RBP12.55□□□□□ -0.4
RPL28-208ENST00000559463 SPI1P17947 270 aa12.55□□□□□ -0.4
RPL28-208ENST00000559463 SLC25A1P53007 311 aa12.55□□□□□ -0.4
RPL28-208ENST00000559463 ZMAT1Q5H9K5 638 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms