RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 RAC2P15153 192 aa14.95□□□□□ -0.02
SMAD3-210ENST00000559092 LMO4P61968 165 aa14.95□□□□□ -0.02
SMAD3-210ENST00000559092 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.95□□□□□ -0.02
SMAD3-210ENST00000559092 TRAP1Q12931 704 aaKnown RBP14.95□□□□□ -0.02
SMAD3-210ENST00000559092 MICAQ29983 383 aa14.95□□□□□ -0.02
SMAD3-210ENST00000559092 OR2T5Q6IEZ7 315 aa14.95□□□□□ -0.02
SMAD3-210ENST00000559092 OR9Q2Q8NGE9 314 aa14.95□□□□□ -0.02
SMAD3-210ENST00000559092 OR2T29Q8NH02 315 aa14.95□□□□□ -0.02
SMAD3-210ENST00000559092 SLC7A6Q92536 515 aa14.95□□□□□ -0.02
SMAD3-210ENST00000559092 APOBEC3DQ96AK3 386 aaPredicted RBP14.95□□□□□ -0.02
SMAD3-210ENST00000559092 LRGUKQ96M69 825 aa14.95□□□□□ -0.02
SMAD3-210ENST00000559092 DDOQ99489 341 aa14.95□□□□□ -0.02
SMAD3-210ENST00000559092 CDADC1Q9BWV3 514 aa14.95□□□□□ -0.02
SMAD3-210ENST00000559092 DGCR6LQ9BY27 220 aa14.95□□□□□ -0.02
SMAD3-210ENST00000559092 EGLN3Q9H6Z9 239 aa14.95□□□□□ -0.02
SMAD3-210ENST00000559092 REEP1Q9H902 201 aa14.95□□□□□ -0.02
SMAD3-210ENST00000559092 KCNG2Q9UJ96 466 aa14.95□□□□□ -0.02
SMAD3-210ENST00000559092 WNT9BO14905 357 aa14.94□□□□□ -0.02
SMAD3-210ENST00000559092 UBOX5O94941 541 aa14.94□□□□□ -0.02
SMAD3-210ENST00000559092 GPANK1O95872 356 aa14.94□□□□□ -0.02
SMAD3-210ENST00000559092 RAP2AP10114 183 aa14.94□□□□□ -0.02
SMAD3-210ENST00000559092 TNFSF4P23510 183 aa14.94□□□□□ -0.02
SMAD3-210ENST00000559092 MEP1BQ16820 701 aa14.94□□□□□ -0.02
SMAD3-210ENST00000559092 KRTAP27-1Q3LI81 207 aa14.94□□□□□ -0.02
SMAD3-210ENST00000559092 CLEC12AQ5QGZ9 265 aa14.94□□□□□ -0.02
SMAD3-210ENST00000559092 SLC35F1Q5T1Q4 408 aa14.94□□□□□ -0.02
SMAD3-210ENST00000559092 OTPQ5XKR4 325 aa14.94□□□□□ -0.02
SMAD3-210ENST00000559092 CXXC5Q7LFL8 322 aaKnown RBP14.94□□□□□ -0.02
SMAD3-210ENST00000559092 AQP11Q8NBQ7 271 aa14.94□□□□□ -0.02
SMAD3-210ENST00000559092 OR2AJ1Q8NGZ0 328 aa14.94□□□□□ -0.02
SMAD3-210ENST00000559092 SPATA3Q8NHX4 192 aa14.94□□□□□ -0.02
SMAD3-210ENST00000559092 CCL17Q92583 94 aa14.94□□□□□ -0.02
SMAD3-210ENST00000559092 POFUT1Q9H488 388 aa14.94□□□□□ -0.02
SMAD3-210ENST00000559092 MSL2Q9HCI7 577 aa14.94□□□□□ -0.02
SMAD3-210ENST00000559092 TREM2Q9NZC2 230 aa14.94□□□□□ -0.02
SMAD3-210ENST00000559092 CYB5R1Q9UHQ9 305 aa14.94□□□□□ -0.02
SMAD3-210ENST00000559092 BAIAP2Q9UQB8 552 aa14.94□□□□□ -0.02
SMAD3-210ENST00000559092 SAMHD1Q9Y3Z3 626 aaKnown RBP14.94□□□□□ -0.02
SMAD3-210ENST00000559092 YLPM1P49750 1951 aaKnown RBP14.94□□□□□ -0.02
SMAD3-210ENST00000559092 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.93□□□□□ -0.021e-7■■■■□ 22.3
SMAD3-210ENST00000559092 ACOT8O14734 319 aa14.93□□□□□ -0.02
SMAD3-210ENST00000559092 MSMBP08118 114 aa14.93□□□□□ -0.02
SMAD3-210ENST00000559092 DBHP09172 617 aa14.93□□□□□ -0.02
SMAD3-210ENST00000559092 GGT2P36268 569 aa14.93□□□□□ -0.02
SMAD3-210ENST00000559092 TNFAIP6P98066 277 aaPredicted RBP14.93□□□□□ -0.02
SMAD3-210ENST00000559092 ZNF362Q5T0B9 420 aaPredicted RBP14.93□□□□□ -0.02
SMAD3-210ENST00000559092 SLC18B1Q6NT16 456 aa14.93□□□□□ -0.02
SMAD3-210ENST00000559092 FBXW12Q6X9E4 464 aa14.93□□□□□ -0.02
SMAD3-210ENST00000559092 COLCA1Q6ZS62 124 aa14.93□□□□□ -0.02
SMAD3-210ENST00000559092 TRPM8Q7Z2W7 1104 aa14.93□□□□□ -0.02
SMAD3-210ENST00000559092 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.93□□□□□ -0.02
SMAD3-210ENST00000559092 PEG10Q86TG7 708 aaKnown RBP14.93□□□□□ -0.02
SMAD3-210ENST00000559092 GLCCI1Q86VQ1 547 aa14.93□□□□□ -0.02
SMAD3-210ENST00000559092 LNX2Q8N448 690 aa14.93□□□□□ -0.02
SMAD3-210ENST00000559092 SDR9C7Q8NEX9 313 aa14.93□□□□□ -0.02
SMAD3-210ENST00000559092 OR2T4Q8NH00 348 aa14.93□□□□□ -0.02
SMAD3-210ENST00000559092 OR51F2Q8NH61 342 aa14.93□□□□□ -0.02
SMAD3-210ENST00000559092 TMEM158Q8WZ71 300 aa14.93□□□□□ -0.02
SMAD3-210ENST00000559092 TMEM186Q96B77 213 aa14.93□□□□□ -0.02
SMAD3-210ENST00000559092 THTPAQ9BU02 230 aa14.93□□□□□ -0.02
SMAD3-210ENST00000559092 NARFLQ9H6Q4 476 aa14.93□□□□□ -0.02
SMAD3-210ENST00000559092 WIPI2Q9Y4P8 454 aa14.93□□□□□ -0.02
SMAD3-210ENST00000559092 AQP12BA6NM10 295 aa14.92□□□□□ -0.02
SMAD3-210ENST00000559092 SURF4O15260 269 aa14.92□□□□□ -0.02
SMAD3-210ENST00000559092 HLA-DQA2P01906 255 aa14.92□□□□□ -0.02
SMAD3-210ENST00000559092 ZNF823P16415 610 aa14.92□□□□□ -0.02
SMAD3-210ENST00000559092 TNFRSF1AP19438 455 aa14.92□□□□□ -0.02
SMAD3-210ENST00000559092 MVKQ03426 396 aa14.92□□□□□ -0.02
SMAD3-210ENST00000559092 RSPO1Q2MKA7 263 aaPredicted RBP14.92□□□□□ -0.02
SMAD3-210ENST00000559092 ACSM5Q6NUN0 579 aa14.92□□□□□ -0.02
SMAD3-210ENST00000559092 SLC27A4Q6P1M0 643 aa14.92□□□□□ -0.02
SMAD3-210ENST00000559092 CORO6Q6QEF8 472 aa14.92□□□□□ -0.02
SMAD3-210ENST00000559092 CD300LDQ6UXZ3 194 aa14.92□□□□□ -0.02
SMAD3-210ENST00000559092 AQP12AQ8IXF9 295 aa14.92□□□□□ -0.02
SMAD3-210ENST00000559092 CCDC124Q96CT7 223 aaKnown RBP14.92□□□□□ -0.02
SMAD3-210ENST00000559092 RAB39BQ96DA2 213 aa14.92□□□□□ -0.02
SMAD3-210ENST00000559092 PITX2Q99697 317 aa14.92□□□□□ -0.02
SMAD3-210ENST00000559092 CHID1Q9BWS9 393 aa14.92□□□□□ -0.02
SMAD3-210ENST00000559092 TSSK6Q9BXA6 273 aa14.92□□□□□ -0.02
SMAD3-210ENST00000559092 PLA2G12AQ9BZM1 189 aa14.92□□□□□ -0.02
SMAD3-210ENST00000559092 ZNF665Q9H7R5 613 aa14.92□□□□□ -0.02
SMAD3-210ENST00000559092 IL19Q9UHD0 177 aa14.92□□□□□ -0.02
SMAD3-210ENST00000559092 CACNG2Q9Y698 323 aa14.92□□□□□ -0.02
SMAD3-210ENST00000559092 U3KQV3 271 aa14.92□□□□□ -0.02
SMAD3-210ENST00000559092 TRAV20A0A0B4J274 112 aa14.91□□□□□ -0.02
SMAD3-210ENST00000559092 FAM157AC9JC47 383 aa14.91□□□□□ -0.02
SMAD3-210ENST00000559092 AVPI1Q5T686 147 aa14.91□□□□□ -0.02
SMAD3-210ENST00000559092 CFAP77Q6ZQR2 320 aa14.91□□□□□ -0.02
SMAD3-210ENST00000559092 Q6ZR03 302 aa14.91□□□□□ -0.02
SMAD3-210ENST00000559092 IL17RELQ6ZVW7 336 aa14.91□□□□□ -0.02
SMAD3-210ENST00000559092 OR2T33Q8NG76 320 aa14.91□□□□□ -0.02
SMAD3-210ENST00000559092 OR2Z1Q8NG97 314 aa14.91□□□□□ -0.02
SMAD3-210ENST00000559092 OR8D4Q8NGM9 314 aa14.91□□□□□ -0.02
SMAD3-210ENST00000559092 BCAS4Q8TDM0 211 aa14.91□□□□□ -0.02
SMAD3-210ENST00000559092 CLPTM1LQ96KA5 538 aa14.91□□□□□ -0.02
SMAD3-210ENST00000559092 ATF6BQ99941 703 aa14.91□□□□□ -0.02
SMAD3-210ENST00000559092 C1QTNF5Q9BXJ0 243 aa14.91□□□□□ -0.02
SMAD3-210ENST00000559092 TBC1D23Q9NUY8 699 aa14.91□□□□□ -0.02
SMAD3-210ENST00000559092 HIF1ANQ9NWT6 349 aa14.91□□□□□ -0.02
SMAD3-210ENST00000559092 MRPL22Q9NWU5 206 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms