RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 CCDC167Q9P0B6 97 aa8.1□□□□□ -1.11
SPG11-212ENST00000558790 ZDHHC8Q9ULC8 765 aa8.1□□□□□ -1.11
SPG11-212ENST00000558790 CORO2BQ9UQ03 480 aa8.1□□□□□ -1.11
SPG11-212ENST00000558790 INSIG2Q9Y5U4 225 aa8.1□□□□□ -1.11
SPG11-212ENST00000558790 SOX21Q9Y651 276 aaPredicted RBP8.1□□□□□ -1.11
SPG11-212ENST00000558790 USH1CQ9Y6N9 552 aa8.1□□□□□ -1.11
SPG11-212ENST00000558790 RYR2Q92736 4967 aa8.1□□□□□ -1.11
SPG11-212ENST00000558790 TRAV40A0A0B4J280 105 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 A0A1W2PRG6 482 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 TRAPPC13A5PLN9 417 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 CENPBD1B2RD01 187 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 H3BSA7 217 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 TIMM8AO60220 97 aaPredicted RBP8.09□□□□□ -1.11
SPG11-212ENST00000558790 NGFP01138 241 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 HIST1H2ABP04908 130 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 SBK2P0C263 348 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 VSIG10L2P0DP72 767 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 ACADSP16219 412 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 OMGP23515 440 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 SLC6A9P48067 706 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 GDI2P50395 445 aaKnown RBP8.09□□□□□ -1.11
SPG11-212ENST00000558790 DAP3P51398 398 aaKnown RBP8.09□□□□□ -1.11
SPG11-212ENST00000558790 UGT2B15P54855 530 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 BTG1P62324 171 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 TNFAIP6P98066 277 aaPredicted RBP8.09□□□□□ -1.11
SPG11-212ENST00000558790 PSG4Q00888 419 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 SRSF4Q08170 494 aaKnown RBP8.09□□□□□ -1.11
SPG11-212ENST00000558790 PIN1Q13526 163 aaPredicted RBP8.09□□□□□ -1.11
SPG11-212ENST00000558790 CYP51A1Q16850 503 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 TMEM155Q4W5P6 130 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 EPGNQ6UW88 154 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 HIST3H2AQ7L7L0 130 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 HDDC2Q7Z4H3 204 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 PARP8Q8N3A8 854 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 ZNF283Q8N7M2 679 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 PFN4Q8NHR9 129 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 NRG4Q8WWG1 115 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 NSMAFQ92636 917 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 HDAC2Q92769 488 aaKnown RBP8.09□□□□□ -1.11
SPG11-212ENST00000558790 HIST1H2ACQ93077 130 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 NMD3Q96D46 503 aaKnown RBP8.09□□□□□ -1.11
SPG11-212ENST00000558790 SIGLEC11Q96RL6 698 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 PRSS27Q9BQR3 290 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 ADI1Q9BV57 179 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 SLC19A3Q9BZV2 496 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 MS4A7Q9GZW8 240 aaPredicted RBP8.09□□□□□ -1.11
SPG11-212ENST00000558790 PCDHAC1Q9H158 963 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 WNT5BQ9H1J7 359 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 PATZ1Q9HBE1 687 aaKnown RBP8.09□□□□□ -1.11
SPG11-212ENST00000558790 EIF3KQ9UBQ5 218 aaKnown RBP8.09□□□□□ -1.11
SPG11-212ENST00000558790 OR5V1Q9UGF6 321 aa8.09□□□□□ -1.11
SPG11-212ENST00000558790 SACSQ9NZJ4 4579 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 EVPLLA8MZ36 301 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 POLR3GO15318 223 aaPredicted RBP8.08□□□□□ -1.12
SPG11-212ENST00000558790 GPANK1O95872 356 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 LIPAP38571 399 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 AQP2P41181 271 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 CRYBA2P53672 197 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 MTPNP58546 118 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 CD47Q08722 323 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 SELPLGQ14242 412 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 TAF11Q15544 211 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 SGCAQ16586 387 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 ESCO2Q56NI9 601 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 MTX3Q5HYI7 312 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 ARMC4Q5T2S8 1044 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 UNQ6126/PRO20091Q6UXV3 157 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 DLEU7Q6UYE1 221 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 Q6ZR03 302 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 C9orf139Q6ZV77 190 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 CLDN22Q8N7P3 220 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 C11orf65Q8NCR3 313 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 MOSPD2Q8NHP6 518 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 TMIGD2Q96BF3 282 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 TAMM41Q96BW9 452 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 MPP4Q96JB8 637 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 C20orf173Q96LM9 149 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 EBF4Q9BQW3 602 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 OR2H1Q9GZK4 316 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 KCNN2Q9H2S1 579 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 SMURF2Q9HAU4 748 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 INIPQ9NRY2 104 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 C20orf141Q9NUB4 165 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 KLHL21Q9UJP4 597 aa8.08□□□□□ -1.12
SPG11-212ENST00000558790 TET2Q6N021 2002 aaPredicted RBP8.07□□□□□ -1.12
SPG11-212ENST00000558790 A0A1W2PRX2 142 aa8.07□□□□□ -1.12
SPG11-212ENST00000558790 CEACAM18A8MTB9 384 aa8.07□□□□□ -1.12
SPG11-212ENST00000558790 M0QX08 132 aa8.07□□□□□ -1.12
SPG11-212ENST00000558790 ERLIN1O75477 346 aa8.07□□□□□ -1.12
SPG11-212ENST00000558790 OR7A10O76100 309 aa8.07□□□□□ -1.12
SPG11-212ENST00000558790 TGDSO95455 350 aa8.07□□□□□ -1.12
SPG11-212ENST00000558790 PLATP00750 562 aa8.07□□□□□ -1.12
SPG11-212ENST00000558790 MT-ND1P03886 318 aa8.07□□□□□ -1.12
SPG11-212ENST00000558790 FUT1P19526 365 aa8.07□□□□□ -1.12
SPG11-212ENST00000558790 LAP3P28838 519 aa8.07□□□□□ -1.12
SPG11-212ENST00000558790 CD80P33681 288 aa8.07□□□□□ -1.12
SPG11-212ENST00000558790 PCGF2P35227 344 aa8.07□□□□□ -1.12
SPG11-212ENST00000558790 PAX2Q02962 417 aa8.07□□□□□ -1.12
SPG11-212ENST00000558790 PAX8Q06710 450 aa8.07□□□□□ -1.12
SPG11-212ENST00000558790 PSG7Q13046 419 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms