RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 PITX2Q99697 317 aa11.84□□□□□ -0.51
TSPAN3-205ENST00000558745 RAB1BQ9H0U4 201 aa11.84□□□□□ -0.51
TSPAN3-205ENST00000558745 BARX1Q9HBU1 254 aaPredicted RBP11.84□□□□□ -0.51
TSPAN3-205ENST00000558745 PNRC2Q9NPJ4 139 aaKnown RBP11.84□□□□□ -0.51
TSPAN3-205ENST00000558745 HINT3Q9NQE9 182 aaKnown RBP11.84□□□□□ -0.51
TSPAN3-205ENST00000558745 KRT84Q9NSB2 600 aa11.84□□□□□ -0.51
TSPAN3-205ENST00000558745 TMEFF2Q9UIK5 374 aaPredicted RBP11.84□□□□□ -0.51
TSPAN3-205ENST00000558745 OAZ3Q9UMX2 235 aa11.84□□□□□ -0.51
TSPAN3-205ENST00000558745 COMMD3-BMI1R4GMX3 469 aa11.84□□□□□ -0.51
TSPAN3-205ENST00000558745 IGLV3-9A0A075B6K5 115 aa11.83□□□□□ -0.52
TSPAN3-205ENST00000558745 ANKRD65E5RJM6 399 aa11.83□□□□□ -0.52
TSPAN3-205ENST00000558745 F5H5K5 113 aa11.83□□□□□ -0.52
TSPAN3-205ENST00000558745 M0R233 179 aa11.83□□□□□ -0.52
TSPAN3-205ENST00000558745 HPXP02790 462 aa11.83□□□□□ -0.52
TSPAN3-205ENST00000558745 SPARCP09486 303 aa11.83□□□□□ -0.52
TSPAN3-205ENST00000558745 FCGR1AP12314 374 aa11.83□□□□□ -0.52
TSPAN3-205ENST00000558745 COL8A2P25067 703 aa11.83□□□□□ -0.52
TSPAN3-205ENST00000558745 RBMXP38159 391 aaKnown RBP11.83□□□□□ -0.52
TSPAN3-205ENST00000558745 MAGEB1P43366 347 aa11.83□□□□□ -0.52
TSPAN3-205ENST00000558745 PRSS12P56730 875 aa11.83□□□□□ -0.52
TSPAN3-205ENST00000558745 KLF3P57682 345 aaPredicted RBP11.83□□□□□ -0.52
TSPAN3-205ENST00000558745 SNAPC1Q16533 368 aa11.83□□□□□ -0.52
TSPAN3-205ENST00000558745 NKPD1Q17RQ9 610 aa11.83□□□□□ -0.52
TSPAN3-205ENST00000558745 ZNF718Q3SXZ3 478 aa11.83□□□□□ -0.52
TSPAN3-205ENST00000558745 ZMYND19Q96E35 227 aaPredicted RBP11.83□□□□□ -0.52
TSPAN3-205ENST00000558745 COX4I2Q96KJ9 171 aa11.83□□□□□ -0.52
TSPAN3-205ENST00000558745 RHNO1Q9BSD3 238 aa11.83□□□□□ -0.52
TSPAN3-205ENST00000558745 REG4Q9BYZ8 158 aa11.83□□□□□ -0.52
TSPAN3-205ENST00000558745 GABARAPL1Q9H0R8 117 aa11.83□□□□□ -0.52
TSPAN3-205ENST00000558745 SLC25A19Q9HC21 320 aa11.83□□□□□ -0.52
TSPAN3-205ENST00000558745 CSPG4Q6UVK1 2322 aa11.82□□□□□ -0.52
TSPAN3-205ENST00000558745 C5orf63A6NC05 138 aa11.82□□□□□ -0.52
TSPAN3-205ENST00000558745 PRR23D1E9PI22 279 aaPredicted RBP11.82□□□□□ -0.52
TSPAN3-205ENST00000558745 PRKYO43930 277 aa11.82□□□□□ -0.52
TSPAN3-205ENST00000558745 LY6G6DO95868 133 aa11.82□□□□□ -0.52
TSPAN3-205ENST00000558745 HMGN1P05114 100 aa11.82□□□□□ -0.52
TSPAN3-205ENST00000558745 PRR23D2P0DMB1 279 aaPredicted RBP11.82□□□□□ -0.52
TSPAN3-205ENST00000558745 GCH1P30793 250 aa11.82□□□□□ -0.52
TSPAN3-205ENST00000558745 PSG7Q13046 419 aa11.82□□□□□ -0.52
TSPAN3-205ENST00000558745 HNRNPA0Q13151 305 aaKnown RBP11.82□□□□□ -0.52
TSPAN3-205ENST00000558745 HLXQ14774 488 aaPredicted RBP11.82□□□□□ -0.52
TSPAN3-205ENST00000558745 KLHL12Q53G59 568 aa11.82□□□□□ -0.52
TSPAN3-205ENST00000558745 CLEC2AQ6UVW9 174 aa11.82□□□□□ -0.52
TSPAN3-205ENST00000558745 DCXRQ7Z4W1 244 aa11.82□□□□□ -0.52
TSPAN3-205ENST00000558745 ERI1Q8IV48 349 aaKnown RBP11.82□□□□□ -0.52
TSPAN3-205ENST00000558745 FAM168AQ92567 244 aa11.82□□□□□ -0.52
TSPAN3-205ENST00000558745 CMBLQ96DG6 245 aa11.82□□□□□ -0.52
TSPAN3-205ENST00000558745 COQ7Q99807 217 aa11.82□□□□□ -0.52
TSPAN3-205ENST00000558745 CIB1Q99828 191 aa11.82□□□□□ -0.52
TSPAN3-205ENST00000558745 REPIN1Q9BWE0 567 aaKnown RBP11.82□□□□□ -0.52
TSPAN3-205ENST00000558745 ELOVL3Q9HB03 270 aa11.82□□□□□ -0.52
TSPAN3-205ENST00000558745 TBCCD1Q9NVR7 557 aa11.82□□□□□ -0.52
TSPAN3-205ENST00000558745 PTTG3PQ9NZH4 202 aa11.82□□□□□ -0.52
TSPAN3-205ENST00000558745 SELENOFO60613 162 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 ICMTO60725 284 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 NCR1O76036 304 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 GLCEO94923 617 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 IGHV3-13P01766 116 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 DAOP14920 347 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 FOSL1P15407 271 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 GSTT1P30711 240 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 ENTPD1P49961 510 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 HCCSP53701 268 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 SELENOVP59797 346 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 TSTQ16762 297 aaKnown RBP11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 KRTAP27-1Q3LI81 207 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 SPRNQ5BIV9 151 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 ARL9Q6T311 187 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 CXXC5Q7LFL8 322 aaKnown RBP11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 DPY19L4Q7Z388 723 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 PARP8Q8N3A8 854 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 OR6N2Q8NGY6 317 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 C10orf105Q8TEF2 133 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 PLEKHA8Q96JA3 519 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 AMELYQ99218 206 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 OSBPL10Q9BXB5 764 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 HDHD2Q9H0R4 259 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 MS4A5Q9H3V2 200 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 S100A14Q9HCY8 104 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 CENPMQ9NSP4 180 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 KCNG2Q9UJ96 466 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 N6AMT1Q9Y5N5 214 aa11.81□□□□□ -0.52
TSPAN3-205ENST00000558745 CHD3Q12873 2000 aaKnown RBP11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 C17orf100A8MU93 164 aa11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 SPRY3O43610 288 aa11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 ACSM4P0C7M7 580 aa11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 IGFBP5P24593 272 aa11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 PDLIM4P50479 330 aa11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 MMP15P51511 669 aa11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 PRKXP51817 358 aa11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 RPS7P62081 194 aaKnown RBP11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 ESRRGP62508 458 aa11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 PPP2R2BQ00005 443 aa11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 EIF2B1Q14232 305 aaKnown RBP11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 PCK2Q16822 640 aa11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 ZIK1Q3SY52 487 aaPredicted RBP11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 SLX4IPQ5VYV7 408 aa11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 MBNL2Q5VZF2 373 aaKnown RBP11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 TIGD4Q8IY51 512 aa11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 TCEANCQ8N8B7 351 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms