RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 CTBP2P56545 445 aa3.63□□□□□ -1.83
ZEB1-212ENST00000558655 DSCR4P56555 118 aaPredicted RBP3.63□□□□□ -1.83
ZEB1-212ENST00000558655 B3GALT5-AS1P59052 145 aa3.63□□□□□ -1.83
ZEB1-212ENST00000558655 RAB11AP62491 216 aa3.63□□□□□ -1.83
ZEB1-212ENST00000558655 MXD1Q05195 221 aa3.63□□□□□ -1.83
ZEB1-212ENST00000558655 HLXQ14774 488 aaPredicted RBP3.63□□□□□ -1.83
ZEB1-212ENST00000558655 RAB11BQ15907 218 aa3.63□□□□□ -1.83
ZEB1-212ENST00000558655 TRIM16LQ309B1 348 aa3.63□□□□□ -1.83
ZEB1-212ENST00000558655 PLPPR5Q32ZL2 321 aa3.63□□□□□ -1.83
ZEB1-212ENST00000558655 TMEM41BQ5BJD5 291 aa3.63□□□□□ -1.83
ZEB1-212ENST00000558655 ATG4DQ86TL0 474 aaPredicted RBP3.63□□□□□ -1.83
ZEB1-212ENST00000558655 SIAH3Q8IW03 269 aa3.63□□□□□ -1.83
ZEB1-212ENST00000558655 GTPBP8Q8N3Z3 284 aaPredicted RBP3.63□□□□□ -1.83
ZEB1-212ENST00000558655 ZADH2Q8N4Q0 377 aa3.63□□□□□ -1.83
ZEB1-212ENST00000558655 RBMXL3Q8N7X1 1067 aaKnown RBP3.63□□□□□ -1.83
ZEB1-212ENST00000558655 BEND2Q8NDZ0 799 aa3.63□□□□□ -1.83
ZEB1-212ENST00000558655 C19orf18Q8NEA5 215 aa3.63□□□□□ -1.83
ZEB1-212ENST00000558655 OR6T1Q8NGN1 323 aa3.63□□□□□ -1.83
ZEB1-212ENST00000558655 ZNF420Q8TAQ5 688 aaPredicted RBP3.63□□□□□ -1.83
ZEB1-212ENST00000558655 FAM110DQ8TAY7 271 aaPredicted RBP3.63□□□□□ -1.83
ZEB1-212ENST00000558655 GGHQ92820 318 aa3.63□□□□□ -1.83
ZEB1-212ENST00000558655 OSTF1Q92882 214 aa3.63□□□□□ -1.83
ZEB1-212ENST00000558655 ZMYND19Q96E35 227 aaPredicted RBP3.63□□□□□ -1.83
ZEB1-212ENST00000558655 BOD1Q96IK1 185 aa3.63□□□□□ -1.83
ZEB1-212ENST00000558655 SIGLEC12Q96PQ1 595 aa3.63□□□□□ -1.83
ZEB1-212ENST00000558655 MDFIQ99750 246 aa3.63□□□□□ -1.83
ZEB1-212ENST00000558655 PRSS27Q9BQR3 290 aa3.63□□□□□ -1.83
ZEB1-212ENST00000558655 ZDHHC11Q9H8X9 412 aa3.63□□□□□ -1.83
ZEB1-212ENST00000558655 ZFP64Q9NPA5 681 aa3.63□□□□□ -1.83
ZEB1-212ENST00000558655 EXOSC4Q9NPD3 245 aaKnown RBP3.63□□□□□ -1.83
ZEB1-212ENST00000558655 DEPPQ9NTK1 212 aa3.63□□□□□ -1.83
ZEB1-212ENST00000558655 PTTG3PQ9NZH4 202 aa3.63□□□□□ -1.83
ZEB1-212ENST00000558655 ADAM30Q9UKF2 790 aa3.63□□□□□ -1.83
ZEB1-212ENST00000558655 URB1O60287 2271 aaKnown RBP3.62□□□□□ -1.83
ZEB1-212ENST00000558655 NPIPA5A0A0B4J1W7 369 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 TRBV2A0A0J9YWF9 115 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 TRAPPC13A5PLN9 417 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 FAM90A8PA6NJQ4 464 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 CLDN24A6NM45 220 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 NPIPA7E9PJI5 369 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 H3BN98 237 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 KLRC4-KLRK1H3BQV0 150 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 CHP2O43745 196 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 NPIPB7O75200 414 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 SLC25A12O75746 678 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 RPP14O95059 124 aaKnown RBP3.62□□□□□ -1.83
ZEB1-212ENST00000558655 IFNA6P05013 189 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 FAM90A13PP0C7W8 464 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 FAM90A24PP0C7X0 464 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 NPIPA8P0DM63 369 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 PNMTP11086 282 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 JUNBP17275 347 aaPredicted RBP3.62□□□□□ -1.83
ZEB1-212ENST00000558655 RAB4AP20338 218 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 APOBEC1P41238 236 aaKnown RBP3.62□□□□□ -1.83
ZEB1-212ENST00000558655 SLC6A9P48067 706 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 CCL11P51671 97 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 RIDAP52758 137 aaKnown RBP3.62□□□□□ -1.83
ZEB1-212ENST00000558655 RGS8P57771 180 aaPredicted RBP3.62□□□□□ -1.83
ZEB1-212ENST00000558655 ST3GAL4Q11206 333 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 RAB32Q13637 225 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 ZNF169Q14929 603 aaPredicted RBP3.62□□□□□ -1.83
ZEB1-212ENST00000558655 TRAM2Q15035 370 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 PTGES3Q15185 160 aaKnown RBP3.62□□□□□ -1.83
ZEB1-212ENST00000558655 ETFDHQ16134 617 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 TBRG1Q3YBR2 411 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 ZNF324BQ6AW86 544 aaPredicted RBP3.62□□□□□ -1.83
ZEB1-212ENST00000558655 CYB5R2Q6BCY4 276 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 ZNF770Q6IQ21 691 aaPredicted RBP3.62□□□□□ -1.83
ZEB1-212ENST00000558655 C3orf33Q6P1S2 294 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 PRSS57Q6UWY2 283 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 CD300LDQ6UXZ3 194 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 GRINAQ7Z429 371 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 MDGA2Q7Z553 956 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 MARCH3Q86UD3 253 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 RNF113BQ8IZP6 322 aaKnown RBP3.62□□□□□ -1.83
ZEB1-212ENST00000558655 ZFP41Q8N8Y5 198 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 TMEM234Q8WY98 164 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 GTF3AQ92664 365 aaKnown RBP3.62□□□□□ -1.83
ZEB1-212ENST00000558655 SLC38A4Q969I6 547 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 RFT1Q96AA3 541 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 PNPLA2Q96AD5 504 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 LGALS12Q96DT0 336 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 YIPF6Q96EC8 236 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 ZHX1-C8orf76Q96EF9 292 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 RNFT2Q96EX2 444 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 NUDT11Q96G61 164 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 MEGF10Q96KG7 1140 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 COX4I2Q96KJ9 171 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 APOL4Q9BPW4 351 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 CDADC1Q9BWV3 514 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 NUAK2Q9H093 628 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 RACGAP1Q9H0H5 632 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 DCSTAMPQ9H295 470 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 HRH4Q9H3N8 390 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 ZNF703Q9H7S9 590 aaPredicted RBP3.62□□□□□ -1.83
ZEB1-212ENST00000558655 NMNAT1Q9HAN9 279 aaPredicted RBP3.62□□□□□ -1.83
ZEB1-212ENST00000558655 PLCXD1Q9NUJ7 323 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 FAIMQ9NVQ4 179 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 IMPAD1Q9NX62 359 aa3.62□□□□□ -1.83
ZEB1-212ENST00000558655 SCN3BQ9NY72 215 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms