RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 FAM118AQ9NWS6 357 aa13.35□□□□□ -0.27
LINC01220-201ENST00000558575 KCNG2Q9UJ96 466 aa13.35□□□□□ -0.27
LINC01220-201ENST00000558575 GDF2Q9UK05 429 aaPredicted RBP13.35□□□□□ -0.27
LINC01220-201ENST00000558575 NDRG4Q9ULP0 352 aaKnown RBP13.35□□□□□ -0.27
LINC01220-201ENST00000558575 TMEM129A0AVI4 362 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 C5orf49A4QMS7 147 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 PRODHO43272 600 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 GPRIN2O60269 458 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 DOK2O60496 412 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 SELENOFO60613 162 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 DBHP09172 617 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 APLNRP35414 380 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 PTH2RP49190 550 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 ENTPD1P49961 510 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 GDI2P50395 445 aaKnown RBP13.34□□□□□ -0.27
LINC01220-201ENST00000558575 BLVRAP53004 296 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 SLC34A1Q06495 639 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 SNTB2Q13425 540 aaKnown RBP13.34□□□□□ -0.27
LINC01220-201ENST00000558575 ADIPOQQ15848 244 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 TBC1D28Q2M2D7 210 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 KRTAP27-1Q3LI81 207 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 SLC35D3Q5M8T2 416 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 ELFN2Q5R3F8 820 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 DTX2Q86UW9 622 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 OR1J2Q8NGS2 313 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 PITX2Q99697 317 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 KCNS3Q9BQ31 491 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 CDADC1Q9BWV3 514 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 GSX2Q9BZM3 304 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 CDH20Q9HBT6 801 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 PLEK2Q9NYT0 353 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 AASSQ9UDR5 926 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 POLR1DQ9Y2S0 133 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 ORC6Q9Y5N6 252 aa13.34□□□□□ -0.27
LINC01220-201ENST00000558575 TENM1Q9UKZ4 2725 aa13.33□□□□□ -0.27
LINC01220-201ENST00000558575 SLC16A6O15403 523 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 NGFP01138 241 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 SPARCP09486 303 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 FAM157BP0CG42 384 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 CCNOP22674 350 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 APOBEC3AP31941 199 aaPredicted RBP13.33□□□□□ -0.28
LINC01220-201ENST00000558575 GLRXP35754 106 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 HTR5AP47898 357 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 FABP6P51161 128 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 HCCSP53701 268 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 UCP2P55851 309 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 ERVS71-1P61550 626 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 RAB35Q15286 201 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 NXNL2Q5VZ03 156 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 C11orf71Q6IPW1 123 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 ZNF544Q6NX49 715 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 TMEM154Q6P9G4 183 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 VHLLQ6RSH7 139 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 MEPCEQ7L2J0 689 aaKnown RBP13.33□□□□□ -0.28
LINC01220-201ENST00000558575 DPY19L4Q7Z388 723 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 ERI1Q8IV48 349 aaKnown RBP13.33□□□□□ -0.28
LINC01220-201ENST00000558575 ZNF101Q8IZC7 436 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 PACRGLQ8N7B6 248 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 OR8J1Q8NGP2 316 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 ST7LQ8TDW4 575 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 INTS14Q96SY0 518 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 AMELYQ99218 206 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 TRAF4Q9BUZ4 470 aaPredicted RBP13.33□□□□□ -0.28
LINC01220-201ENST00000558575 ZNF442Q9H7R0 627 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 RNPEPL1Q9HAU8 725 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 LAMP3Q9UQV4 416 aa13.33□□□□□ -0.28
LINC01220-201ENST00000558575 LOC100130705A0A1B0GUX0 176 aa13.32□□□□□ -0.28
LINC01220-201ENST00000558575 OVOL3O00110 214 aa13.32□□□□□ -0.28
LINC01220-201ENST00000558575 ICMTO60725 284 aa13.32□□□□□ -0.28
LINC01220-201ENST00000558575 OR4A8P0C604 315 aa13.32□□□□□ -0.28
LINC01220-201ENST00000558575 GABRB1P18505 474 aa13.32□□□□□ -0.28
LINC01220-201ENST00000558575 SWI5Q1ZZU3 235 aa13.32□□□□□ -0.28
LINC01220-201ENST00000558575 DCXRQ7Z4W1 244 aa13.32□□□□□ -0.28
LINC01220-201ENST00000558575 NAA40Q86UY6 237 aa13.32□□□□□ -0.28
LINC01220-201ENST00000558575 MUC15Q8N387 334 aa13.32□□□□□ -0.28
LINC01220-201ENST00000558575 OR2AJ1Q8NGZ0 328 aa13.32□□□□□ -0.28
LINC01220-201ENST00000558575 FAM81AQ8TBF8 368 aa13.32□□□□□ -0.28
LINC01220-201ENST00000558575 TRUB1Q8WWH5 349 aaKnown RBP13.32□□□□□ -0.28
LINC01220-201ENST00000558575 C4orf45Q96LM5 186 aa13.32□□□□□ -0.28
LINC01220-201ENST00000558575 ZNF582Q96NG8 517 aaPredicted RBP13.32□□□□□ -0.28
LINC01220-201ENST00000558575 COQ7Q99807 217 aa13.32□□□□□ -0.28
LINC01220-201ENST00000558575 PRRG3Q9BZD7 231 aa13.32□□□□□ -0.28
LINC01220-201ENST00000558575 OR51B6Q9H340 312 aa13.32□□□□□ -0.28
LINC01220-201ENST00000558575 SMPD3Q9NY59 655 aaPredicted RBP13.32□□□□□ -0.28
LINC01220-201ENST00000558575 KLHDC2Q9Y2U9 406 aa13.32□□□□□ -0.28
LINC01220-201ENST00000558575 ANOS1P23352 680 aa13.31□□□□□ -0.28
LINC01220-201ENST00000558575 SERPINF1P36955 418 aa13.31□□□□□ -0.28
LINC01220-201ENST00000558575 NAA10P41227 235 aaPredicted RBP13.31□□□□□ -0.28
LINC01220-201ENST00000558575 CDC42P60953 191 aa13.31□□□□□ -0.28
LINC01220-201ENST00000558575 RPS7P62081 194 aaKnown RBP13.31□□□□□ -0.28
LINC01220-201ENST00000558575 SNRPGP62308 76 aaKnown RBP13.31□□□□□ -0.28
LINC01220-201ENST00000558575 TNK1Q13470 666 aa13.31□□□□□ -0.28
LINC01220-201ENST00000558575 TMEM255AQ5JRV8 349 aa13.31□□□□□ -0.28
LINC01220-201ENST00000558575 SLC25A30Q5SVS4 291 aa13.31□□□□□ -0.28
LINC01220-201ENST00000558575 RFPL4BQ6ZWI9 263 aa13.31□□□□□ -0.28
LINC01220-201ENST00000558575 LRP11Q86VZ4 500 aa13.31□□□□□ -0.28
LINC01220-201ENST00000558575 FBXL14Q8N1E6 418 aa13.31□□□□□ -0.28
LINC01220-201ENST00000558575 OR6N2Q8NGY6 317 aa13.31□□□□□ -0.28
LINC01220-201ENST00000558575 RDH12Q96NR8 316 aa13.31□□□□□ -0.28
LINC01220-201ENST00000558575 ABHD6Q9BV23 337 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms