RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 NTN3O00634 580 aaPredicted RBP7.41□□□□□ -1.22
SPG11-209ENST00000558253 ARPC1BO15143 372 aaKnown RBP7.41□□□□□ -1.22
SPG11-209ENST00000558253 LDLRAD4O15165 306 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 GMFGO60234 142 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 DOK2O60496 412 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 GMDSO60547 372 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 WNT11O96014 354 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 ALDOBP05062 364 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 DCNP07585 359 aaKnown RBP7.41□□□□□ -1.22
SPG11-209ENST00000558253 CHRM2P08172 466 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 ADRB1P08588 477 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 ITGA5P08648 1049 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 PGA4P0DJD7 388 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 PGA3P0DJD8 388 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 TDGF1P13385 188 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 ZNF43P17038 809 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 RAB3AP20336 220 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 TSPAN7P41732 249 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 ZNF133P52736 654 aaPredicted RBP7.41□□□□□ -1.22
SPG11-209ENST00000558253 DSCR4P56555 118 aaPredicted RBP7.41□□□□□ -1.22
SPG11-209ENST00000558253 PER3P56645 1201 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 CLDN12P56749 244 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 CSNK2A1P68400 391 aaPredicted RBP7.41□□□□□ -1.22
SPG11-209ENST00000558253 CTAG1AP78358 180 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 ZFP36L1Q07352 338 aaKnown RBP7.41□□□□□ -1.22
SPG11-209ENST00000558253 MELKQ14680 651 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 ARL6IP1Q15041 203 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 POU4F3Q15319 338 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 CLVS2Q5SYC1 327 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 GLYATL3Q5SZD4 288 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 ZBTB37Q5TC79 503 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 FAM69BQ5VUD6 431 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 OR7E24Q6IFN5 339 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 STEAP1BQ6NZ63 245 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 ZNF529Q6P280 563 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 LRFN4Q6PJG9 635 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 SLC25A47Q6Q0C1 308 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 SHISA6Q6ZSJ9 500 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 TMPRSS9Q7Z410 1059 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 DTWD2Q8NBA8 298 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 NOXO1Q8NFA2 376 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 C11orf40Q8WZ69 217 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 FAM46BQ96A09 425 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 PNPLA2Q96AD5 504 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 NTNG2Q96CW9 530 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 C10orf35Q96D05 121 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 SLAMF6Q96DU3 332 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 ARL5BQ96KC2 179 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 SGCZQ96LD1 299 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 RASL10BQ96S79 203 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 ZPBPQ9BS86 351 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 ANGPTL4Q9BY76 406 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 ULBP3Q9BZM4 244 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 OR10A4Q9H209 315 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 GAREM1Q9H706 876 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 METTL17Q9H7H0 456 aaPredicted RBP7.41□□□□□ -1.22
SPG11-209ENST00000558253 PLSCR3Q9NRY6 295 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 GHRLQ9UBU3 117 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 ELF5Q9UKW6 265 aaPredicted RBP7.41□□□□□ -1.22
SPG11-209ENST00000558253 GTF2A1LQ9UNN4 478 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 SLC5A6Q9Y289 635 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 MYO9BQ13459 2157 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 TDRD6O60522 2096 aaKnown RBP7.4□□□□□ -1.22
SPG11-209ENST00000558253 IGHV1-45A0A0A0MS14 117 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 A0A1B0GTH9 108 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 DCDC2BA2VCK2 349 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 HMSDA8MTL9 139 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 DISC1C4P0D8 188 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 D6RAR5 112 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 LAMTOR5O43504 91 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 SYT7O43581 403 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 TIAF1O95411 115 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 CYB5AP00167 134 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 CD74P04233 296 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 ZNF883P0CG24 379 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 MYF5P13349 255 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 HLA-DOBP13765 273 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 GTF2F2P13984 249 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 MAGEB1P43366 347 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 VEGFCP49767 419 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 SSR4P51571 173 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 P2RY4P51582 365 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 RAB14P61106 215 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 GABREP78334 506 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 MFGE8Q08431 387 aaPredicted RBP7.4□□□□□ -1.22
SPG11-209ENST00000558253 PCOLCEQ15113 449 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 TAF13Q15543 124 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 ETFDHQ16134 617 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 ZNF528Q3MIS6 628 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 Q5BKY6 102 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 RNASE12Q5GAN4 147 aaKnown RBP7.4□□□□□ -1.22
SPG11-209ENST00000558253 LPCAT3Q6P1A2 487 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 FAHD2BQ6P2I3 314 aaPredicted RBP7.4□□□□□ -1.22
SPG11-209ENST00000558253 TEX261Q6UWH6 196 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 TMPPEQ6ZT21 453 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 NLRC3Q7RTR2 1065 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 SLC36A1Q7Z2H8 476 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 LYPD6Q86Y78 171 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 CLEC1AQ8NC01 280 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 OR1M1Q8NGA1 313 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms