RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 RAB35Q15286 201 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 CTSL3PQ5NE16 218 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 RIC1Q4ADV7 1423 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 CTXN2P0C2S0 81 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 NKX2-1P43699 371 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-248ENST00000558190 PAX5Q02548 391 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 ACOT6Q3I5F7 207 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-248ENST00000558190 OR7E24Q6IFN5 339 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 NAXDQ8IW45 347 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 OR5K2Q8NHB8 316 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF75AQ96N20 296 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 COL25A1Q9BXS0 654 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-248ENST00000558190 NKX2-4Q9H2Z4 354 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 COA4Q9NYJ1 87 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 MST1RQ04912 1400 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 OR10G8Q8NGN5 311 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 HGDQ93099 445 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 FUBP3Q96I24 572 aaKnown RBP eCLIP3.36□□□□□ -1.87
ATXN3-248ENST00000558190 FAM173AQ9BQD7 235 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 M0R1X1 148 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 GSTZ1O43708 216 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-248ENST00000558190 SRSF10O75494 262 aaKnown RBP3.36□□□□□ -1.87
ATXN3-248ENST00000558190 HEXAP06865 529 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 TRA2BP62995 288 aaKnown RBP3.36□□□□□ -1.87
ATXN3-248ENST00000558190 C1orf61Q13536 156 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 SLC10A1Q14973 349 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 MED16Q9Y2X0 877 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 WSB1Q9Y6I7 421 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 IRAK2O43187 625 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 SLC25A4P12235 298 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF684Q5T5D7 378 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 FAM219BQ5XKK7 198 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 FAM71E1Q6IPT2 247 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 ANKRD16Q6P6B7 361 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 NPSR1Q6W5P4 371 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 VN1R17PQ8TDU5 208 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 PEX11GQ96HA9 241 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 CAPNS2Q96L46 248 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 SERINC2Q96SA4 455 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 GABARAPL3Q9BY60 117 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 CLEC18AA5D8T8 446 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF43P17038 809 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 AADACL3Q5VUY0 350 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 CLEC18CQ8NCF0 446 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 SLC16A11Q8NCK7 471 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 CPT1CQ8TCG5 803 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 SIRT5Q9NXA8 310 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 SIRT4Q9Y6E7 314 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-248ENST00000558190 IGHA2P01877 340 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 FURINP09958 794 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 PRDX1Q06830 199 aaKnown RBP3.36□□□□□ -1.87
ATXN3-248ENST00000558190 RPS4Y2Q8TD47 263 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 SIRT7Q9NRC8 400 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 NECAP2Q9NVZ3 263 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 EHBP1L1Q8N3D4 1523 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 ABCA10Q8WWZ4 1543 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 SPTAN1Q13813 2472 aaKnown RBP3.36□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF253O75346 499 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 TMEM255BQ8WV15 326 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 CMBLQ96DG6 245 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 TSSK2Q96PF2 358 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 LPAR5Q9H1C0 372 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF552Q9H707 407 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-248ENST00000558190 SLC6A13Q9NSD5 602 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 A8MXK9 166 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 LY6G5CQ5SRR4 150 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 SLC25A30Q5SVS4 291 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 GJD4Q96KN9 370 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-248ENST00000558190 UCK1Q9HA47 277 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 FBXO34Q9NWN3 711 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 CTNSO60931 367 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 IMPA1P29218 277 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 FAM3BP58499 235 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF660Q6AZW8 331 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-248ENST00000558190 ABLIM2Q6H8Q1 611 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 CDRT4Q8N9R6 151 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 DUXBA0A1W2PPF3 345 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 B4DEV8 164 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 LPAR6P43657 344 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 TRMT12Q53H54 448 aaKnown RBP3.36□□□□□ -1.87
ATXN3-248ENST00000558190 UBE3DQ7Z6J8 389 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 EXD3Q8N9H8 876 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 WDR76Q9H967 626 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 C2orf72A6NCS6 295 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 SYNGR4O95473 234 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 ERVFC1-1P60608 527 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 NAT8BQ9UHF3 227 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 TMED3Q9Y3Q3 217 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 TP53I11O14683 189 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 RAC2P15153 192 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 VASPP50552 380 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-248ENST00000558190 ERVFRD-1P60508 538 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 PRAMEF27A3QJZ7 478 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 PRPH2P23942 346 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 IHHQ14623 411 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 PRAMEF9Q5VWM5 478 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 H2BFWTQ7Z2G1 175 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 KMT5CQ86Y97 462 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 PLPP7Q8NBV4 271 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF430Q9H8G1 570 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms