RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 OR8S1Q8NH09 359 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 PATE1Q8WXA2 126 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 ASB17Q8WXJ9 295 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 RHOVQ96L33 236 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 PRAP1Q96NZ9 151 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 SHPKQ9UHJ6 478 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 ZDBF2Q9HCK1 2354 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 TRBV5-7A0A0A0MS05 114 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 RPL36A-HNRNPH2H7BZ11 118 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 CCSO14618 274 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 DUS4LO95620 317 aaKnown RBP9.8□□□□□ -0.84
USP3-206ENST00000558157 GYPBP06028 91 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 PSMB5P28074 263 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 PSMB10P40306 273 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 OR2B8PP59922 312 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 GUCA2AQ02747 115 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 DUSP8Q13202 625 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 SKP2Q13309 424 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 ARHGAP19Q14CB8 494 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 LYSMD4Q5XG99 296 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 PMS2CLQ68D20 193 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 ZNF585AQ6P3V2 769 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 FRRS1Q6ZNA5 592 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 C17orf64Q86WR6 236 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 ZNF614Q8N883 585 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 ACOT4Q8N9L9 421 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 LINC01555Q8NAE3 123 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 OR13C2Q8NGS9 318 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 PFN4Q8NHR9 129 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 C16orf58Q96GQ5 468 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 C20orf141Q9NUB4 165 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 DNAJB11Q9UBS4 358 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 FBXO4Q9UKT5 387 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 ATXN7L1Q9ULK2 861 aaPredicted RBP9.8□□□□□ -0.84
USP3-206ENST00000558157 KCNIP3Q9Y2W7 256 aa9.8□□□□□ -0.84
USP3-206ENST00000558157 ARHGEF17Q96PE2 2063 aaPredicted RBP9.79□□□□□ -0.84
USP3-206ENST00000558157 LOC100289279A0A1B0GTE1 492 aa9.79□□□□□ -0.84
USP3-206ENST00000558157 IFITM10A6NMD0 228 aa9.79□□□□□ -0.84
USP3-206ENST00000558157 ZNF736B4DX44 427 aaPredicted RBP9.79□□□□□ -0.84
USP3-206ENST00000558157 LYPD3O95274 346 aa9.79□□□□□ -0.84
USP3-206ENST00000558157 PLGP00747 810 aaPredicted RBP9.79□□□□□ -0.84
USP3-206ENST00000558157 SNRNP70P08621 437 aaKnown RBP9.79□□□□□ -0.84
USP3-206ENST00000558157 NME2P22392 152 aa9.79□□□□□ -0.84
USP3-206ENST00000558157 AQP2P41181 271 aa9.79□□□□□ -0.84
USP3-206ENST00000558157 SULT1A1P50225 295 aa9.79□□□□□ -0.84
USP3-206ENST00000558157 RAB28P51157 221 aa9.79□□□□□ -0.84
USP3-206ENST00000558157 IL13RA1P78552 427 aa9.79□□□□□ -0.84
USP3-206ENST00000558157 ZNF684Q5T5D7 378 aa9.79□□□□□ -0.84
USP3-206ENST00000558157 HIST2H3PS2Q5TEC6 136 aa9.79□□□□□ -0.84
USP3-206ENST00000558157 OR4C11Q6IEV9 310 aa9.79□□□□□ -0.84
USP3-206ENST00000558157 HEPN1Q6WQI6 88 aa9.79□□□□□ -0.84
USP3-206ENST00000558157 CD163Q86VB7 1156 aa9.79□□□□□ -0.84
USP3-206ENST00000558157 BPIFB2Q8N4F0 458 aa9.79□□□□□ -0.84
USP3-206ENST00000558157 RAB42Q8N4Z0 105 aa9.79□□□□□ -0.84
USP3-206ENST00000558157 NUP43Q8NFH3 380 aa9.79□□□□□ -0.84
USP3-206ENST00000558157 OR13C8Q8NGS7 320 aa9.79□□□□□ -0.84
USP3-206ENST00000558157 OR5AK2Q8NH90 309 aa9.79□□□□□ -0.84
USP3-206ENST00000558157 DVL3Q92997 716 aaPredicted RBP9.79□□□□□ -0.84
USP3-206ENST00000558157 CCDC74AQ96AQ1 378 aa9.79□□□□□ -0.84
USP3-206ENST00000558157 SEH1LQ96EE3 360 aa9.79□□□□□ -0.84
USP3-206ENST00000558157 KIR3DX1Q9H7L2 352 aa9.79□□□□□ -0.84
USP3-206ENST00000558157 FN3KRPQ9HA64 309 aa9.79□□□□□ -0.84
USP3-206ENST00000558157 TAC3Q9UHF0 121 aa9.79□□□□□ -0.84
USP3-206ENST00000558157 GDF2Q9UK05 429 aaPredicted RBP9.79□□□□□ -0.84
USP3-206ENST00000558157 STARD10Q9Y365 291 aa9.79□□□□□ -0.84
USP3-206ENST00000558157 COLEC10Q9Y6Z7 277 aa9.79□□□□□ -0.84
USP3-206ENST00000558157 A0A0A6YYC8 382 aaPredicted RBP9.78□□□□□ -0.84
USP3-206ENST00000558157 A0A1W2PPV9 198 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 I3L1I5 382 aaPredicted RBP9.78□□□□□ -0.84
USP3-206ENST00000558157 CLDN4O14493 209 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 MED6O75586 246 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 ADH6P28332 368 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 LPAR6P43657 344 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 AFF3P51826 1226 aaKnown RBP9.78□□□□□ -0.84
USP3-206ENST00000558157 NANOS3P60323 173 aaKnown RBP9.78□□□□□ -0.84
USP3-206ENST00000558157 REEP5Q00765 189 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 YOD1Q5VVQ6 348 aaPredicted RBP9.78□□□□□ -0.84
USP3-206ENST00000558157 ETV3LQ6ZN32 361 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 ZNF836Q6ZNA1 936 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 FAM220AQ7Z4H9 259 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 FAM24BQ8N5W8 94 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 UBAC2Q8NBM4 344 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 OR5R1Q8NH85 324 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 CDS1Q92903 461 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 TCTN2Q96GX1 697 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 PIGQQ9BRB3 760 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 RNF126Q9BV68 326 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 RAB11FIP5Q9BXF6 653 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 TTTY10Q9BZA0 68 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 PCBD2Q9H0N5 130 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 METTL9Q9H1A3 318 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 KCNG2Q9UJ96 466 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 DNAH14Q0VDD8 3507 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 A0A1B0GVT2 93 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 B4DGG1 531 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 M0R036 132 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 OR10H2O60403 315 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 DOK2O60496 412 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 YIF1AO95070 293 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 PET100P0DJ07 73 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms