RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 IFI44LQ53G44 452 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 HIST2H3PS2Q5TEC6 136 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 OR2T2Q6IF00 324 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 CGB2Q6NT52 195 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 LEG1Q6P5S2 330 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 LRRN1Q6UXK5 716 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 HIST2H3AQ71DI3 136 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 CBLL1Q75N03 491 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 HDXQ7Z353 690 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 KLBQ86Z14 1044 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 GLB1L2Q8IW92 636 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 SLC15A3Q8IY34 581 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 PARP8Q8N3A8 854 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 OR13G1Q8NGZ3 307 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 UPRTQ96BW1 309 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 RASD2Q96D21 266 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 MEGF10Q96KG7 1140 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 SSBP3Q9BWW4 388 aaPredicted RBP13.35□□□□□ -0.27
SCFD1-224ENST00000557713 SYT4Q9H2B2 425 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 ANKRD19PQ9H560 264 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 VIPAS39Q9H9C1 493 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 NRIP3Q9NQ35 241 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 PTTG3PQ9NZH4 202 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 MIOXQ9UGB7 285 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 ATPIF1Q9UII2 106 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 AP3M1Q9Y2T2 418 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 IGHV3OR16-10A0A075B7F0 116 aa13.34□□□□□ -0.27
SCFD1-224ENST00000557713 CXCR6O00574 342 aa13.34□□□□□ -0.27
SCFD1-224ENST00000557713 RER1O15258 196 aa13.34□□□□□ -0.27
SCFD1-224ENST00000557713 MLNRO43193 412 aa13.34□□□□□ -0.27
SCFD1-224ENST00000557713 ZNF205O95201 554 aa13.34□□□□□ -0.27
SCFD1-224ENST00000557713 FSTL3O95633 263 aa13.34□□□□□ -0.27
SCFD1-224ENST00000557713 ZNF682O95780 498 aa13.34□□□□□ -0.27
SCFD1-224ENST00000557713 CYB5R3P00387 301 aaPredicted RBP13.34□□□□□ -0.27
SCFD1-224ENST00000557713 TROVE2P10155 538 aaKnown RBP eCLIP13.34□□□□□ -0.27
SCFD1-224ENST00000557713 SDHAP31040 664 aa13.34□□□□□ -0.27
SCFD1-224ENST00000557713 MTNR1AP48039 350 aa13.34□□□□□ -0.27
SCFD1-224ENST00000557713 LIPEQ05469 1076 aa13.34□□□□□ -0.27
SCFD1-224ENST00000557713 KRR1Q13601 381 aaKnown RBP13.34□□□□□ -0.27
SCFD1-224ENST00000557713 ZNF181Q2M3W8 571 aa13.34□□□□□ -0.27
SCFD1-224ENST00000557713 GPR139Q6DWJ6 353 aa13.34□□□□□ -0.27
SCFD1-224ENST00000557713 RRM2BQ7LG56 351 aa13.34□□□□□ -0.27
SCFD1-224ENST00000557713 JAZF1Q86VZ6 243 aa13.34□□□□□ -0.27
SCFD1-224ENST00000557713 POU5F2Q8N7G0 328 aa13.34□□□□□ -0.27
SCFD1-224ENST00000557713 OR10AD1Q8NGE0 317 aa13.34□□□□□ -0.27
SCFD1-224ENST00000557713 OR5L1Q8NGL2 311 aa13.34□□□□□ -0.27
SCFD1-224ENST00000557713 SLC7A13Q8TCU3 470 aa13.34□□□□□ -0.27
SCFD1-224ENST00000557713 RAB40AQ8WXH6 277 aa13.34□□□□□ -0.27
SCFD1-224ENST00000557713 TAF15Q92804 592 aaKnown RBP eCLIP13.34□□□□□ -0.27
SCFD1-224ENST00000557713 RCN3Q96D15 328 aa13.34□□□□□ -0.27
SCFD1-224ENST00000557713 SLC30A2Q9BRI3 323 aa13.34□□□□□ -0.27
SCFD1-224ENST00000557713 TMEM246Q9BRR3 403 aa13.34□□□□□ -0.27
SCFD1-224ENST00000557713 NUAK2Q9H093 628 aa13.34□□□□□ -0.27
SCFD1-224ENST00000557713 SIGLEC7Q9Y286 467 aa13.34□□□□□ -0.27
SCFD1-224ENST00000557713 IGHV2-70DA0A0C4DH43 119 aa13.33□□□□□ -0.28
SCFD1-224ENST00000557713 KIR2DS1A0A191URI9 304 aa13.33□□□□□ -0.28
SCFD1-224ENST00000557713 A0A1B0GWJ7 208 aa13.33□□□□□ -0.28
SCFD1-224ENST00000557713 NDUFB2O95178 105 aa13.33□□□□□ -0.28
SCFD1-224ENST00000557713 RPS2P15880 293 aaKnown RBP13.33□□□□□ -0.28
SCFD1-224ENST00000557713 PMELP40967 661 aa13.33□□□□□ -0.28
SCFD1-224ENST00000557713 SRP9P49458 86 aaKnown RBP13.33□□□□□ -0.28
SCFD1-224ENST00000557713 GNB2P62879 340 aa13.33□□□□□ -0.28
SCFD1-224ENST00000557713 SF3A3Q12874 501 aaKnown RBP eCLIP13.33□□□□□ -0.28
SCFD1-224ENST00000557713 RSPO1Q2MKA7 263 aaPredicted RBP13.33□□□□□ -0.28
SCFD1-224ENST00000557713 BTNL3Q6UXE8 466 aa13.33□□□□□ -0.28
SCFD1-224ENST00000557713 TREML4Q6UXN2 200 aa13.33□□□□□ -0.28
SCFD1-224ENST00000557713 PTCHD4Q6ZW05 846 aa13.33□□□□□ -0.28
SCFD1-224ENST00000557713 APOBEC3DQ96AK3 386 aaPredicted RBP13.33□□□□□ -0.28
SCFD1-224ENST00000557713 NEIL1Q96FI4 390 aaPredicted RBP13.33□□□□□ -0.28
SCFD1-224ENST00000557713 FAM46AQ96IP4 442 aaKnown RBP13.33□□□□□ -0.28
SCFD1-224ENST00000557713 HSH2DQ96JZ2 352 aa13.33□□□□□ -0.28
SCFD1-224ENST00000557713 ZNF582Q96NG8 517 aaPredicted RBP13.33□□□□□ -0.28
SCFD1-224ENST00000557713 GPX7Q96SL4 187 aaPredicted RBP13.33□□□□□ -0.28
SCFD1-224ENST00000557713 NDEL1Q9GZM8 345 aa13.33□□□□□ -0.28
SCFD1-224ENST00000557713 SLITRK2Q9H156 845 aa13.33□□□□□ -0.28
SCFD1-224ENST00000557713 RERGLQ9H628 205 aa13.33□□□□□ -0.28
SCFD1-224ENST00000557713 TMEM5Q9Y2B1 443 aa13.33□□□□□ -0.28
SCFD1-224ENST00000557713 IQCF6A8MYZ5 107 aa13.32□□□□□ -0.28
SCFD1-224ENST00000557713 F5H5P2 479 aa13.32□□□□□ -0.28
SCFD1-224ENST00000557713 GPANK1O95872 356 aa13.32□□□□□ -0.28
SCFD1-224ENST00000557713 TXNDC12O95881 172 aa13.32□□□□□ -0.28
SCFD1-224ENST00000557713 CDKN2AP42771 156 aaKnown RBP13.32□□□□□ -0.28
SCFD1-224ENST00000557713 FXYD6P3P58550 94 aa13.32□□□□□ -0.28
SCFD1-224ENST00000557713 ZNF404Q494X3 552 aa13.32□□□□□ -0.28
SCFD1-224ENST00000557713 C16orf87Q6PH81 154 aa13.32□□□□□ -0.28
SCFD1-224ENST00000557713 COLCA1Q6ZS62 124 aa13.32□□□□□ -0.28
SCFD1-224ENST00000557713 FKBP9P1Q75LS8 142 aa13.32□□□□□ -0.28
SCFD1-224ENST00000557713 ARPINQ7Z6K5 226 aa13.32□□□□□ -0.28
SCFD1-224ENST00000557713 MOGAT3Q86VF5 341 aa13.32□□□□□ -0.28
SCFD1-224ENST00000557713 GJC3Q8NFK1 279 aa13.32□□□□□ -0.28
SCFD1-224ENST00000557713 COQ7Q99807 217 aa13.32□□□□□ -0.28
SCFD1-224ENST00000557713 PRDM13Q9H4Q3 707 aa13.32□□□□□ -0.28
SCFD1-224ENST00000557713 FGFR1OP2Q9NVK5 253 aa13.32□□□□□ -0.28
SCFD1-224ENST00000557713 IER3IP1Q9Y5U9 82 aa13.32□□□□□ -0.28
SCFD1-224ENST00000557713 LHFPL6Q9Y693 200 aa13.32□□□□□ -0.28
SCFD1-224ENST00000557713 CAPN7Q9Y6W3 813 aa13.32□□□□□ -0.28
SCFD1-224ENST00000557713 ENPP4Q9Y6X5 453 aa13.32□□□□□ -0.28
SCFD1-224ENST00000557713 IGHV3-64DA0A0J9YX35 117 aa13.31□□□□□ -0.28
SCFD1-224ENST00000557713 A0A1W2PRQ8 180 aa13.31□□□□□ -0.28
SCFD1-224ENST00000557713 DCTN6O00399 190 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms