RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 PLCE1Q9P212 2302 aa13.22□□□□□ -0.29
NEDD1-213ENST00000557644 CSMD2Q7Z408 3487 aa13.21□□□□□ -0.29
NEDD1-213ENST00000557644 DENRO43583 198 aaKnown RBP13.21□□□□□ -0.29
NEDD1-213ENST00000557644 OR2T7P0C7T2 308 aa13.21□□□□□ -0.29
NEDD1-213ENST00000557644 COX5BP10606 129 aa13.21□□□□□ -0.29
NEDD1-213ENST00000557644 WNT5AP41221 380 aa13.21□□□□□ -0.29
NEDD1-213ENST00000557644 MVKQ03426 396 aa13.21□□□□□ -0.29
NEDD1-213ENST00000557644 KRT80Q6KB66 452 aa13.21□□□□□ -0.29
NEDD1-213ENST00000557644 NAA40Q86UY6 237 aa13.21□□□□□ -0.29
NEDD1-213ENST00000557644 ZNF101Q8IZC7 436 aa13.21□□□□□ -0.29
NEDD1-213ENST00000557644 OR2T27Q8NH04 317 aa13.21□□□□□ -0.29
NEDD1-213ENST00000557644 LILRB1Q8NHL6 650 aaPredicted RBP13.21□□□□□ -0.29
NEDD1-213ENST00000557644 GGHQ92820 318 aa13.21□□□□□ -0.29
NEDD1-213ENST00000557644 COQ7Q99807 217 aa13.21□□□□□ -0.29
NEDD1-213ENST00000557644 KCNS3Q9BQ31 491 aa13.21□□□□□ -0.29
NEDD1-213ENST00000557644 TMEM204Q9BSN7 226 aa13.21□□□□□ -0.29
NEDD1-213ENST00000557644 CDH20Q9HBT6 801 aa13.21□□□□□ -0.29
NEDD1-213ENST00000557644 MRPS18AQ9NVS2 196 aaKnown RBP13.21□□□□□ -0.29
NEDD1-213ENST00000557644 SLCO1C1Q9NYB5 712 aa13.21□□□□□ -0.29
NEDD1-213ENST00000557644 ZNF878C9JN71 531 aa13.21□□□□□ -0.3
NEDD1-213ENST00000557644 FAM157BP0CG42 384 aa13.21□□□□□ -0.3
NEDD1-213ENST00000557644 ANOS1P23352 680 aa13.21□□□□□ -0.3
NEDD1-213ENST00000557644 OPRL1P41146 370 aa13.21□□□□□ -0.3
NEDD1-213ENST00000557644 ZNF85Q03923 595 aa13.21□□□□□ -0.3
NEDD1-213ENST00000557644 RAB40BQ12829 278 aa13.21□□□□□ -0.3
NEDD1-213ENST00000557644 ZNF322Q6U7Q0 402 aaPredicted RBP13.21□□□□□ -0.3
NEDD1-213ENST00000557644 IL17RDQ8NFM7 739 aa13.21□□□□□ -0.3
NEDD1-213ENST00000557644 Q9H521 79 aa13.21□□□□□ -0.3
NEDD1-213ENST00000557644 GRIP1Q9Y3R0 1128 aa13.21□□□□□ -0.3
NEDD1-213ENST00000557644 TMEM14AQ9Y6G1 99 aa13.21□□□□□ -0.3
NEDD1-213ENST00000557644 UNC79Q9P2D8 2635 aa13.2□□□□□ -0.3
NEDD1-213ENST00000557644 ASH1LQ9NR48 2969 aaKnown RBP13.2□□□□□ -0.3
NEDD1-213ENST00000557644 ZNF670-ZNF695F2Z2N8 137 aa13.2□□□□□ -0.3
NEDD1-213ENST00000557644 SLC1A7O00341 560 aa13.2□□□□□ -0.3
NEDD1-213ENST00000557644 FAM20BO75063 409 aa13.2□□□□□ -0.3
NEDD1-213ENST00000557644 PRF1P14222 555 aa13.2□□□□□ -0.3
NEDD1-213ENST00000557644 PRKXP51817 358 aa13.2□□□□□ -0.3
NEDD1-213ENST00000557644 TLE4Q04727 773 aa13.2□□□□□ -0.3
NEDD1-213ENST00000557644 TAF13Q15543 124 aa13.2□□□□□ -0.3
NEDD1-213ENST00000557644 KRTAP27-1Q3LI81 207 aa13.2□□□□□ -0.3
NEDD1-213ENST00000557644 ZNF704Q6ZNC4 412 aaPredicted RBP13.2□□□□□ -0.3
NEDD1-213ENST00000557644 SGCDQ92629 289 aa13.2□□□□□ -0.3
NEDD1-213ENST00000557644 POU2F3Q9UKI9 436 aa13.2□□□□□ -0.3
NEDD1-213ENST00000557644 FLNBO75369 2602 aaKnown RBP13.2□□□□□ -0.3
NEDD1-213ENST00000557644 AKAP6Q13023 2319 aa13.2□□□□□ -0.3
NEDD1-213ENST00000557644 ABCA12Q86UK0 2595 aa13.2□□□□□ -0.3
NEDD1-213ENST00000557644 FADS2O95864 444 aaKnown RBP13.2□□□□□ -0.3
NEDD1-213ENST00000557644 NGFP01138 241 aa13.2□□□□□ -0.3
NEDD1-213ENST00000557644 PLEKHG7Q6ZR37 379 aa13.2□□□□□ -0.3
NEDD1-213ENST00000557644 LHFPL3Q86UP9 236 aa13.2□□□□□ -0.3
NEDD1-213ENST00000557644 CLEC4MQ9H2X3 399 aaPredicted RBP13.2□□□□□ -0.3
NEDD1-213ENST00000557644 PSORS1C1Q9UIG5 152 aa13.2□□□□□ -0.3
NEDD1-213ENST00000557644 ATPIF1Q9UII2 106 aa13.2□□□□□ -0.3
NEDD1-213ENST00000557644 IKZF2Q9UKS7 526 aa13.2□□□□□ -0.3
NEDD1-213ENST00000557644 LRP12Q9Y561 859 aa13.2□□□□□ -0.3
NEDD1-213ENST00000557644 H2BFMP0C1H6 154 aa13.19□□□□□ -0.3
NEDD1-213ENST00000557644 ACSM4P0C7M7 580 aa13.19□□□□□ -0.3
NEDD1-213ENST00000557644 SLC2A1P11166 492 aa13.19□□□□□ -0.3
NEDD1-213ENST00000557644 ECH1Q13011 328 aa13.19□□□□□ -0.3
NEDD1-213ENST00000557644 KLHL22Q53GT1 634 aa13.19□□□□□ -0.3
NEDD1-213ENST00000557644 VHLLQ6RSH7 139 aa13.19□□□□□ -0.3
NEDD1-213ENST00000557644 AHSA2Q719I0 299 aa13.19□□□□□ -0.3
NEDD1-213ENST00000557644 KRT77Q7Z794 578 aa13.19□□□□□ -0.3
NEDD1-213ENST00000557644 TMEM200AQ86VY9 491 aa13.19□□□□□ -0.3
NEDD1-213ENST00000557644 ACBD7Q8N6N7 88 aa13.19□□□□□ -0.3
NEDD1-213ENST00000557644 OR1J2Q8NGS2 313 aa13.19□□□□□ -0.3
NEDD1-213ENST00000557644 C4orf45Q96LM5 186 aa13.19□□□□□ -0.3
NEDD1-213ENST00000557644 OR8B4Q96RC9 309 aa13.19□□□□□ -0.3
NEDD1-213ENST00000557644 MNTQ99583 582 aa13.19□□□□□ -0.3
NEDD1-213ENST00000557644 PLCXD1Q9NUJ7 323 aa13.19□□□□□ -0.3
NEDD1-213ENST00000557644 ATP23Q9Y6H3 246 aa13.19□□□□□ -0.3
NEDD1-213ENST00000557644 DAPL1A0PJW8 107 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 PTGES3LE9PB15 166 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 M0R135 149 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 GPRIN2O60269 458 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 ABHD16AO95870 558 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 IGHA1P01876 353 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 NR4A1P22736 598 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 OTX1P32242 354 aaPredicted RBP13.18□□□□□ -0.3
NEDD1-213ENST00000557644 ERVS71-1P61550 626 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 ST3GAL4Q11206 333 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 SNTB2Q13425 540 aaKnown RBP13.18□□□□□ -0.3
NEDD1-213ENST00000557644 RFPL4BQ6ZWI9 263 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 ZNF786Q8N393 782 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 ZNF540Q8NDQ6 660 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 ASB17Q8WXJ9 295 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 AKAP1Q92667 903 aaKnown RBP eCLIP13.18□□□□□ -0.3
NEDD1-213ENST00000557644 ZNF799Q96GE5 643 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 KCNJ15Q99712 375 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 ZNF649Q9BS31 505 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 ELOVL3Q9HB03 270 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 PAK1IP1Q9NWT1 392 aaPredicted RBP13.18□□□□□ -0.3
NEDD1-213ENST00000557644 MRM2Q9UI43 246 aaKnown RBP13.18□□□□□ -0.3
NEDD1-213ENST00000557644 C5orf63A6NC05 138 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 E7EQL1 145 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 HSD11B1P28845 292 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 SLC6A9P48067 706 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 UCP2P55851 309 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 NKX6-1P78426 367 aaPredicted RBP13.18□□□□□ -0.3
NEDD1-213ENST00000557644 ROM1Q03395 351 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms