RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 MYO10Q9HD67 2058 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 ZNF292O60281 2723 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 KMT2BQ9UMN6 2715 aaPredicted RBP3.38□□□□□ -1.87
PRPF39-212ENST00000557477 SPTBN2O15020 2390 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 BAHCC1Q9P281 2608 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 SPAARA0A1B0GVQ0 90 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 A0A1W2PNV4 684 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 OR6C70A6NIJ9 312 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 SMIM23A6NLE4 172 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 DHRS7CA6NNS2 312 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 DENRO43583 198 aaKnown RBP3.38□□□□□ -1.87
PRPF39-212ENST00000557477 TPST2O60704 377 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 SULT1C4O75897 302 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 CCNB2O95067 398 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 LRATO95237 230 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 FABP1P07148 127 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 FGF4P08620 206 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 STSP08842 583 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 GNAO1P09471 354 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 H2BFMP0C1H6 154 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 COX5BP10606 129 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 MLNP12872 115 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 RAB3AP20336 220 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 PCMT1P22061 227 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 SPAM1P38567 509 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 CCT3P49368 545 aaKnown RBP3.38□□□□□ -1.87
PRPF39-212ENST00000557477 P2RY4P51582 365 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 GBX2P52951 348 aaPredicted RBP3.38□□□□□ -1.87
PRPF39-212ENST00000557477 ZNF33AQ06730 810 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 IL24Q13007 206 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 STX5Q13190 355 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 CHIT1Q13231 466 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 ART3Q13508 389 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 DDX39BQ13838 428 aaKnown RBP3.38□□□□□ -1.87
PRPF39-212ENST00000557477 PRR4Q16378 134 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 SSX2Q16385 188 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 TRIM16LQ309B1 348 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 TP53I3Q53FA7 332 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 PAGE2BQ5JRK9 111 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 OR5M10Q6IEU7 315 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 LRRC74BQ6ZQY2 392 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 TRMT10CQ7L0Y3 403 aaKnown RBP3.38□□□□□ -1.87
PRPF39-212ENST00000557477 MOB3BQ86TA1 216 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 NELFCDQ8IXH7 590 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 BLIDQ8IZY5 108 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 CADM2Q8N3J6 435 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 KIR3DL3Q8N743 410 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 OR2A12Q8NGT7 310 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 OR1F12Q8NHA8 337 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 RNASE11Q8TAA1 199 aaKnown RBP3.38□□□□□ -1.87
PRPF39-212ENST00000557477 TRMT10AQ8TBZ6 339 aaKnown RBP3.38□□□□□ -1.87
PRPF39-212ENST00000557477 TCP10LQ8TDR4 215 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 SLC5A11Q8WWX8 675 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 YIPF5Q969M3 257 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 FAF2Q96CS3 445 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 PDXPQ96GD0 296 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 PLEKHA8Q96JA3 519 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 MS4A14Q96JA4 679 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 SERAC1Q96JX3 654 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 MBOAT7Q96N66 472 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 ZNF285Q96NJ3 590 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 PPP1R2P1Q96PQ5 205 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 CYTH2Q99418 400 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 NAPGQ99747 312 aaPredicted RBP3.38□□□□□ -1.87
PRPF39-212ENST00000557477 MRPS26Q9BYN8 205 aaKnown RBP3.38□□□□□ -1.87
PRPF39-212ENST00000557477 MRPL37Q9BZE1 423 aaKnown RBP3.38□□□□□ -1.87
PRPF39-212ENST00000557477 CHIAQ9BZP6 476 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 SLC22A4Q9H015 551 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 ARMC7Q9H6L4 198 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 TREM1Q9NP99 234 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 EXD2Q9NVH0 621 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 THUMPD1Q9NXG2 353 aaKnown RBP3.38□□□□□ -1.87
PRPF39-212ENST00000557477 IL36GQ9NZH8 169 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 OR1A1Q9P1Q5 309 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 SCML2Q9UQR0 700 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 PDE10AQ9Y233 779 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 SLC22A14Q9Y267 594 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 RASD1Q9Y272 281 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 ARL2BPQ9Y2Y0 163 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 MMP24Q9Y5R2 645 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 SMAD5-AS1Q9Y6J3 95 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 TICRRQ7Z2Z1 1910 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 TPRP12270 2363 aaKnown RBP3.38□□□□□ -1.87
PRPF39-212ENST00000557477 MYH9P35579 1960 aaKnown RBP3.38□□□□□ -1.87
PRPF39-212ENST00000557477 FRYLO94915 3013 aa3.38□□□□□ -1.87
PRPF39-212ENST00000557477 OTOGLQ3ZCN5 2332 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 CHD8Q9HCK8 2581 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 USP24Q9UPU5 2620 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 WDR87Q6ZQQ6 2873 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 CFAP47Q6ZTR5 3102 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 IGKV6-21A0A0C4DH24 114 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 IGHV2-70DA0A0C4DH43 119 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 SMIM28A0A1B0GU29 152 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 LRP5LA4QPB2 252 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 FAM47DPA6NHR8 397 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 VSTM2BA6NLU5 285 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 B4DXG7 233 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 NPIPA7E9PJI5 369 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 ARPC3O15145 178 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 SLC37A4O43826 429 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms