RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 A0A087WUU8 490 aa11.75□□□□□ -0.53
SLIRP-210ENST00000557431 TEX13CA0A0J9YWL9 993 aa11.75□□□□□ -0.53
SLIRP-210ENST00000557431 A6NIZ1 184 aa11.75□□□□□ -0.53
SLIRP-210ENST00000557431 POM121CA8CG34 1229 aa11.75□□□□□ -0.53
SLIRP-210ENST00000557431 CLDN34H7C241 214 aa11.75□□□□□ -0.53
SLIRP-210ENST00000557431 MRASO14807 208 aa11.75□□□□□ -0.53
SLIRP-210ENST00000557431 ATP8B1O43520 1251 aa11.75□□□□□ -0.53
SLIRP-210ENST00000557431 COX5BP10606 129 aa11.75□□□□□ -0.53
SLIRP-210ENST00000557431 KDELR2P33947 212 aa11.75□□□□□ -0.53
SLIRP-210ENST00000557431 RAP1BP61224 184 aa11.75□□□□□ -0.53
SLIRP-210ENST00000557431 FGF12P61328 243 aa11.75□□□□□ -0.53
SLIRP-210ENST00000557431 RAP1AP62834 184 aa11.75□□□□□ -0.53
SLIRP-210ENST00000557431 PRKCDQ05655 676 aa11.75□□□□□ -0.53
SLIRP-210ENST00000557431 SYT9Q86SS6 491 aa11.75□□□□□ -0.53
SLIRP-210ENST00000557431 TSPEARQ8WU66 669 aa11.75□□□□□ -0.53
SLIRP-210ENST00000557431 PTP4A1Q93096 173 aa11.75□□□□□ -0.53
SLIRP-210ENST00000557431 ZDHHC16Q969W1 377 aa11.75□□□□□ -0.53
SLIRP-210ENST00000557431 NEIL1Q96FI4 390 aaPredicted RBP11.75□□□□□ -0.53
SLIRP-210ENST00000557431 CHIAQ9BZP6 476 aa11.75□□□□□ -0.53
SLIRP-210ENST00000557431 SYT4Q9H2B2 425 aa11.75□□□□□ -0.53
SLIRP-210ENST00000557431 TET2Q6N021 2002 aaPredicted RBP11.75□□□□□ -0.53
SLIRP-210ENST00000557431 FAM220BPB1ANY3 271 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 C22orf46C9J442 243 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 SURF4O15260 269 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 KNG1P01042 644 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 SFTPBP07988 381 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 PITPNBP48739 271 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 RAG2P55895 527 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 AQP6Q13520 282 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 PRAMEF6Q5VXH4 476 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 FAM205BPQ63HN1 556 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 CORO6Q6QEF8 472 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 LRRN1Q6UXK5 716 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 C9orf139Q6ZV77 190 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 FAM122BQ7Z309 247 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 OFCC1Q8IZS5 231 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 FITM2Q8N6M3 262 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 OR8G5Q8NG78 346 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 OR8J3Q8NGG0 315 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 OR8B3Q8NGG8 313 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 OR1F12Q8NHA8 337 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 FNDC8Q8TC99 324 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 FAM46AQ96IP4 442 aaKnown RBP11.74□□□□□ -0.53
SLIRP-210ENST00000557431 TSSK2Q96PF2 358 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 OR8B2Q96RD0 313 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 PCGF1Q9BSM1 259 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 TMEM120AQ9BXJ8 343 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 GRHPRQ9UBQ7 328 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 NOTCH1P46531 2555 aa11.74□□□□□ -0.53
SLIRP-210ENST00000557431 PRSS37A4D1T9 235 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 OR6C6A6NF89 314 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 SOCS2O14508 198 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 XKRYO14609 159 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 SLC16A7O60669 478 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 CD14P08571 375 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 RAC2P15153 192 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 CENPAP49450 140 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 SELENOWP63302 87 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 KRR1Q13601 381 aaKnown RBP11.73□□□□□ -0.53
SLIRP-210ENST00000557431 TRAM2Q15035 370 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 ZNF404Q494X3 552 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 METTL21CQ5VZV1 264 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 ERICH5Q6P6B1 374 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 BRICD5Q6PL45 260 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 ZNF730Q6ZMV8 503 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 PTCHD4Q6ZW05 846 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 C1QL4Q86Z23 238 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 CCT8L2Q96SF2 557 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 FNDC11Q9BVV2 318 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 CCDC134Q9H6E4 229 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 UFSP2Q9NUQ7 469 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 FGFR1OP2Q9NVK5 253 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 C1RLQ9NZP8 487 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 MIOXQ9UGB7 285 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 RPS6KA6Q9UK32 745 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 TMCC3Q9ULS5 477 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 POLR1DQ9Y2S0 133 aa11.73□□□□□ -0.53
SLIRP-210ENST00000557431 PLXNB1O43157 2135 aa11.72□□□□□ -0.53
SLIRP-210ENST00000557431 VWFP04275 2813 aa11.72□□□□□ -0.53
SLIRP-210ENST00000557431 LOC100653049A0A140TA62 436 aa11.72□□□□□ -0.53
SLIRP-210ENST00000557431 KIR2DS1A0A191URI9 304 aa11.72□□□□□ -0.53
SLIRP-210ENST00000557431 SRRM5B3KS81 715 aa11.72□□□□□ -0.53
SLIRP-210ENST00000557431 DCTN6O00399 190 aa11.72□□□□□ -0.53
SLIRP-210ENST00000557431 KRT34O76011 436 aa11.72□□□□□ -0.53
SLIRP-210ENST00000557431 ZNF682O95780 498 aa11.72□□□□□ -0.53
SLIRP-210ENST00000557431 IFNA14P01570 189 aa11.72□□□□□ -0.53
SLIRP-210ENST00000557431 TROVE2P10155 538 aaKnown RBP eCLIP11.72□□□□□ -0.53
SLIRP-210ENST00000557431 ANOS1P23352 680 aa11.72□□□□□ -0.53
SLIRP-210ENST00000557431 SRP9P49458 86 aaKnown RBP11.72□□□□□ -0.53
SLIRP-210ENST00000557431 KLF10Q13118 480 aa11.72□□□□□ -0.53
SLIRP-210ENST00000557431 ZBED5Q49AG3 693 aa11.72□□□□□ -0.53
SLIRP-210ENST00000557431 WDR25Q64LD2 544 aaPredicted RBP11.72□□□□□ -0.53
SLIRP-210ENST00000557431 C17orf107Q6ZR85 190 aa11.72□□□□□ -0.53
SLIRP-210ENST00000557431 RHOUQ7L0Q8 258 aa11.72□□□□□ -0.53
SLIRP-210ENST00000557431 LINC00346Q8IVM7 164 aa11.72□□□□□ -0.53
SLIRP-210ENST00000557431 BOLLQ8N9W6 283 aaKnown RBP11.72□□□□□ -0.53
SLIRP-210ENST00000557431 OR2T12Q8NG77 320 aa11.72□□□□□ -0.53
SLIRP-210ENST00000557431 OR13G1Q8NGZ3 307 aa11.72□□□□□ -0.53
SLIRP-210ENST00000557431 SLC30A2Q9BRI3 323 aa11.72□□□□□ -0.53
SLIRP-210ENST00000557431 NUAK2Q9H093 628 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms