RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 FOXN4Q96NZ1 517 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 ATF6BQ99941 703 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 PLA2G12AQ9BZM1 189 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 NMNAT2Q9BZQ4 307 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 OR2J1Q9GZK6 312 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 OR51B6Q9H340 312 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 FN3KQ9H479 309 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 TOR3AQ9H497 397 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 OPA3Q9H6K4 179 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 CHODLQ9H9P2 273 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 KRT84Q9NSB2 600 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 H2AFY2Q9P0M6 372 aaPredicted RBP6.73□□□□□ -1.33
PSEN1-222ENST00000557356 LHFPL6Q9Y693 200 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 POLQO75417 2590 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 ROS1P08922 2347 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 VWC2LB2RUY7 222 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 IFNL4K9M1U5 179 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 TIMM8AO60220 97 aaPredicted RBP6.72□□□□□ -1.33
PSEN1-222ENST00000557356 GLCEO94923 617 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 LY6G6DO95868 133 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 CLPTM1O96005 669 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 NGFP01138 241 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 ANPEPP15144 967 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 TNFRSF1AP19438 455 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 KITLGP21583 273 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 ACHEP22303 614 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 GSTT1P30711 240 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 PYCR1P32322 319 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 GGT2P36268 569 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 ALDH3B1P43353 468 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 GZMKP49863 264 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 CHN2P52757 468 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 ACTR3P61158 418 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 GRB2P62993 217 aaKnown RBP6.72□□□□□ -1.33
PSEN1-222ENST00000557356 SNCBQ16143 134 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 SNAPC1Q16533 368 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 MEP1BQ16820 701 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 PCK2Q16822 640 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 HFEQ30201 348 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 CYB5R2Q6BCY4 276 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 DRAM2Q6UX65 266 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 FBXW12Q6X9E4 464 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.72□□□□□ -1.33
PSEN1-222ENST00000557356 TMEM179BQ7Z7N9 219 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 PEG10Q86TG7 708 aaKnown RBP6.72□□□□□ -1.33
PSEN1-222ENST00000557356 LRP11Q86VZ4 500 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.72□□□□□ -1.33
PSEN1-222ENST00000557356 ZNF454Q8N9F8 522 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 OR6K6Q8NGW6 343 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 OR13G1Q8NGZ3 307 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 OR4Q3Q8NH05 313 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 ELMOD3Q96FG2 381 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 TIMD4Q96H15 378 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 ZNF582Q96NG8 517 aaPredicted RBP6.72□□□□□ -1.33
PSEN1-222ENST00000557356 INTS14Q96SY0 518 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 C1QTNF5Q9BXJ0 243 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 KRTAP3-3Q9BYR6 98 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 KRTAP3-2Q9BYR7 98 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 SLC22A4Q9H015 551 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 NIPAL2Q9H841 368 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 NTN4Q9HB63 628 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 SLC25A19Q9HC21 320 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 FZR1Q9UM11 496 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 STARD10Q9Y365 291 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 ORC6Q9Y5N6 252 aa6.72□□□□□ -1.33
PSEN1-222ENST00000557356 USF3Q68DE3 2245 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 IGHV4-30-2A0A087WSY4 118 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 IGHV1-69-2A0A0G2JMI3 117 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 ZNF878C9JN71 531 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 F5H5K5 113 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 CD5LO43866 347 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 LCATP04180 440 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 CD55P08174 381 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 SPARCP09486 303 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 NAT2P11245 290 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 PCMT1P22061 227 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 CFL1P23528 166 aaKnown RBP6.71□□□□□ -1.34
PSEN1-222ENST00000557356 DDOSTP39656 456 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 CRYBB2P43320 205 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 RAD23AP54725 363 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 ERVS71-1P61550 626 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 CCL8P80075 99 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 MZT1Q08AG7 82 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 PSG7Q13046 419 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 CCNIQ14094 377 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 MAD2L1BPQ15013 274 aaPredicted RBP6.71□□□□□ -1.34
PSEN1-222ENST00000557356 PTGES3Q15185 160 aaKnown RBP6.71□□□□□ -1.34
PSEN1-222ENST00000557356 KLHL12Q53G59 568 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 LCN1P1Q5VSP4 162 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 KDM4DQ6B0I6 523 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 ACSM5Q6NUN0 579 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 PLBD1Q6P4A8 553 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 KCTD18Q6PI47 426 aaPredicted RBP6.71□□□□□ -1.34
PSEN1-222ENST00000557356 CORO6Q6QEF8 472 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 COLCA1Q6ZS62 124 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 RFPL4BQ6ZWI9 263 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 DCXRQ7Z4W1 244 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 CPOQ8IVL8 374 aa6.71□□□□□ -1.34
PSEN1-222ENST00000557356 ZCCHC24Q8N2G6 241 aaKnown RBP6.71□□□□□ -1.34
PSEN1-222ENST00000557356 CIARTQ8N365 385 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms