RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 HNRNPCL2B2RXH8 293 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 HNRNPCL3B7ZW38 293 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 ZSCAN12O43309 604 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 HNRNPCL1O60812 293 aaKnown RBP10.11□□□□□ -0.79
PSEN1-220ENST00000557037 DUX4L2P0CJ85 424 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 DUX4L3P0CJ86 424 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 DUX4L4P0CJ87 422 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 DUX4L5P0CJ88 424 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 DUX4L6P0CJ89 424 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 DUX4L7P0CJ90 424 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 HNRNPCL4P0DMR1 293 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 ACADSP16219 412 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 TUBG1P23258 451 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 S100A3P33764 101 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 UBE2E1P51965 193 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 MAB21L1Q13394 359 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 CCDC153Q494R4 210 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 KHDC1LQ5JSQ8 128 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 FAM27BQ5VT28 67 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 FAM91A1Q658Y4 838 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 NXNQ6DKJ4 435 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 DUX4L9Q6RFH8 374 aaPredicted RBP10.11□□□□□ -0.79
PSEN1-220ENST00000557037 Q6ZS46 218 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 MRPL41Q8IXM3 137 aaKnown RBP10.11□□□□□ -0.79
PSEN1-220ENST00000557037 SLC7A6Q92536 515 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 SLC35B4Q969S0 331 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 AJUBAQ96IF1 538 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 PPP1R36Q96LQ0 422 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 ECSITQ9BQ95 431 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 NUF2Q9BZD4 464 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 TUBG2Q9NRH3 451 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 RNF7Q9UBF6 113 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 DUX4Q9UBX2 424 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 BTNL2Q9UIR0 455 aa10.11□□□□□ -0.79
PSEN1-220ENST00000557037 NDRG4Q9ULP0 352 aaKnown RBP10.11□□□□□ -0.79
PSEN1-220ENST00000557037 KIAA1109Q2LD37 5005 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 IGHV3OR15-7A0A075B7D8 119 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 A0A0B4J2E0 115 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 A0A1B0GX12 115 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 SYNGR1O43759 233 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 TRIM13O60858 407 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 JTBO76095 146 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 KRT75O95678 551 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 CST2P09228 141 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 FPR3P25089 353 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 VDAC2P45880 294 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-220ENST00000557037 RGS6P49758 472 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 ZNF133P52736 654 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-220ENST00000557037 CDH12P55289 794 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 PRSS12P56730 875 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 DSTNP60981 165 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 PCBD1P61457 104 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 ELF3P78545 371 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-220ENST00000557037 ACSM1Q08AH1 577 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 MAD2L1Q13257 205 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-220ENST00000557037 PCLAFQ15004 111 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 OR1Q1Q15612 314 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 INTS11Q5TA45 600 aaKnown RBP10.1□□□□□ -0.79
PSEN1-220ENST00000557037 LY6G5BQ8NDX9 201 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 PIFOQ8TCI5 191 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 AENQ8WTP8 325 aaKnown RBP10.1□□□□□ -0.79
PSEN1-220ENST00000557037 MZB1Q8WU39 189 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 ASB10Q8WXI3 467 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 MYDGFQ969H8 173 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 TESCQ96BS2 214 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 SEPHS2Q99611 448 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 TMEM43Q9BTV4 400 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 PRSS22Q9GZN4 317 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 TMEM27Q9HBJ8 222 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 TMEM100Q9NV29 134 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 ASIC5Q9NY37 505 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 HIF3AQ9Y2N7 669 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 TSSC4Q9Y5U2 329 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-220ENST00000557037 CAPN7Q9Y6W3 813 aa10.1□□□□□ -0.79
PSEN1-220ENST00000557037 TRAV38-1A0A0B4J264 116 aa10.09□□□□□ -0.79
PSEN1-220ENST00000557037 OOEPA6NGQ2 149 aa10.09□□□□□ -0.79
PSEN1-220ENST00000557037 SERPINB5P36952 375 aa10.09□□□□□ -0.79
PSEN1-220ENST00000557037 MVDP53602 400 aa10.09□□□□□ -0.79
PSEN1-220ENST00000557037 RAD23AP54725 363 aa10.09□□□□□ -0.79
PSEN1-220ENST00000557037 NME5P56597 212 aa10.09□□□□□ -0.79
PSEN1-220ENST00000557037 NCALDP61601 193 aa10.09□□□□□ -0.79
PSEN1-220ENST00000557037 ENDOGQ14249 297 aaKnown RBP10.09□□□□□ -0.79
PSEN1-220ENST00000557037 ZNF74Q16587 644 aa10.09□□□□□ -0.79
PSEN1-220ENST00000557037 LIAT1Q6ZQX7 453 aa10.09□□□□□ -0.79
PSEN1-220ENST00000557037 TMEM219Q86XT9 240 aa10.09□□□□□ -0.79
PSEN1-220ENST00000557037 FAM90A1Q86YD7 464 aa10.09□□□□□ -0.79
PSEN1-220ENST00000557037 SLC30A8Q8IWU4 369 aa10.09□□□□□ -0.79
PSEN1-220ENST00000557037 ZNF583Q96ND8 569 aa10.09□□□□□ -0.79
PSEN1-220ENST00000557037 NANSQ9NR45 359 aa10.09□□□□□ -0.79
PSEN1-220ENST00000557037 A0A1W2PRG6 482 aa10.08□□□□□ -0.8
PSEN1-220ENST00000557037 BLOC1S5-TXNDC5H3BN57 136 aa10.08□□□□□ -0.8
PSEN1-220ENST00000557037 KPNA4O00629 521 aaPredicted RBP10.08□□□□□ -0.8
PSEN1-220ENST00000557037 NDUFA2O43678 99 aa10.08□□□□□ -0.8
PSEN1-220ENST00000557037 DOK2O60496 412 aa10.08□□□□□ -0.8
PSEN1-220ENST00000557037 TPST1O60507 370 aa10.08□□□□□ -0.8
PSEN1-220ENST00000557037 HIST1H2ABP04908 130 aa10.08□□□□□ -0.8
PSEN1-220ENST00000557037 UMPSP11172 480 aa10.08□□□□□ -0.8
PSEN1-220ENST00000557037 CHATP28329 748 aa10.08□□□□□ -0.8
PSEN1-220ENST00000557037 CD47Q08722 323 aa10.08□□□□□ -0.8
PSEN1-220ENST00000557037 CNN3Q15417 329 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms