RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 HLA-DOBP13765 273 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 ECHS1P30084 290 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 SOAT1P35610 550 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 HPCAL1P37235 193 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 SERPINB8P50452 374 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 SRSF3P84103 164 aaKnown RBP4.6□□□□□ -1.67
ATXN3-245ENST00000556958 PUDPQ08623 228 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 PTGR1Q14914 329 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 NPTX1Q15818 432 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 PDCD4Q53EL6 469 aaKnown RBP4.6□□□□□ -1.67
ATXN3-245ENST00000556958 GPAT3Q53EU6 434 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 UNC50Q53HI1 259 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 ZNF678Q5SXM1 525 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 RFPL4BQ6ZWI9 263 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 OLIG3Q7RTU3 272 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 C17orf53Q8N3J3 647 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-245ENST00000556958 LRRC18Q8N456 261 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 LY6G5BQ8NDX9 201 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 OR6X1Q8NH79 312 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 OR5AK3PQ8NH89 298 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 CLHC1Q8NHS4 586 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 Q8TCH9 128 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 MIPOL1Q8TD10 442 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 ST8SIA4Q92187 359 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 RORBQ92753 470 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 SLC38A4Q969I6 547 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 TMEM54Q969K7 222 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 ZNF566Q969W8 418 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 ZNF582Q96NG8 517 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-245ENST00000556958 POFUT1Q9H488 388 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 ARMC7Q9H6L4 198 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 METTL8Q9H825 291 aaKnown RBP4.6□□□□□ -1.67
ATXN3-245ENST00000556958 SIAEQ9HAT2 523 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 ABCB10Q9NRK6 738 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 CTSZQ9UBR2 303 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 BAIAP2L1Q9UHR4 511 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 TMED5Q9Y3A6 229 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 JRKLQ9Y4A0 524 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 HERC1Q15751 4861 aa4.6□□□□□ -1.67
ATXN3-245ENST00000556958 TRAV36DV7A0A075B6V5 113 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 A0A087WUJ7 227 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 VGLL3A8MV65 326 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 TMEM114B3SHH9 223 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 ZNF561-AS1K7EIQ3 104 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 EIF3HO15372 352 aaKnown RBP eCLIP4.59□□□□□ -1.67
ATXN3-245ENST00000556958 ABHD16AO95870 558 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 AMY2AP04746 511 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 DBIP07108 87 aaKnown RBP4.59□□□□□ -1.67
ATXN3-245ENST00000556958 GSTA1P08263 222 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 LAMP1P11279 417 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 ETFAP13804 333 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 SDC1P18827 310 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 AMY2BP19961 511 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 IMPDH1P20839 514 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 PRPH2P23942 346 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 CASQ1P31415 396 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 PMELP40967 661 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 MAGEA4P43358 317 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 HTR5AP47898 357 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 GSK3BP49841 420 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 INSL3P51460 131 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 BIDP55957 195 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 LGALS4P56470 323 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 PCBD1P61457 104 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 OR8B8Q15620 311 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 RABL3Q5HYI8 236 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 MRPL2Q5T653 305 aaKnown RBP4.59□□□□□ -1.67
ATXN3-245ENST00000556958 FAM27D1Q5T7N8 215 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 FAM219BQ5XKK7 198 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 SFRP4Q6FHJ7 346 aaPredicted RBP4.59□□□□□ -1.67
ATXN3-245ENST00000556958 WDR88Q6ZMY6 472 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 ETV3LQ6ZN32 361 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 COLCA1Q6ZS62 124 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 HMGN2P46Q86SG4 172 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 PEX5LQ8IYB4 626 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 PNKDQ8N490 385 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 SLC26A10Q8NG04 563 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 OR8G5Q8NG78 346 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 OR7A2PQ8NGA2 310 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 OR5D13Q8NGL4 314 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 OR5M8Q8NGP6 311 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 OR6S1Q8NH40 331 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 PIFOQ8TCI5 191 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 RPS4Y2Q8TD47 263 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 TNFRSF14Q92956 283 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 TAAR8Q969N4 342 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 SLC41A3Q96GZ6 507 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 SLC25A44Q96H78 314 aaPredicted RBP4.59□□□□□ -1.67
ATXN3-245ENST00000556958 SLC35G5Q96KT7 338 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 TRNT1Q96Q11 434 aaKnown RBP4.59□□□□□ -1.67
ATXN3-245ENST00000556958 KCNA7Q96RP8 456 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 SPATA25Q9BR10 227 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 OR51I1Q9H343 314 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 SMURF1Q9HCE7 757 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 MID1IP1Q9NPA3 183 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 RNF7Q9UBF6 113 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 RPS6KB2Q9UBS0 482 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 PYCARDQ9ULZ3 195 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 TCF19Q9Y242 345 aa4.59□□□□□ -1.67
ATXN3-245ENST00000556958 TIMM10BQ9Y5J6 103 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms