RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 CDX1P47902 265 aaPredicted RBP3.35□□□□□ -1.87
FOXN3-213ENST00000556916 PPT1P50897 306 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 LUMP51884 338 aaPredicted RBP3.35□□□□□ -1.87
FOXN3-213ENST00000556916 CLDN2P57739 230 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 ST8SIA6P61647 398 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 HBA1P69905 142 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 IRF8Q02556 426 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 SSBP1Q04837 148 aaKnown RBP3.35□□□□□ -1.87
FOXN3-213ENST00000556916 ZNF763Q0D2J5 394 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 ELAVL2Q12926 359 aaKnown RBP3.35□□□□□ -1.87
FOXN3-213ENST00000556916 AIMP2Q13155 320 aaKnown RBP3.35□□□□□ -1.87
FOXN3-213ENST00000556916 NAE1Q13564 534 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 TNFAIP1Q13829 316 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 PDE7AQ13946 482 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 ZNF234Q14588 700 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 INSL4Q14641 139 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 MELKQ14680 651 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 ACSM3Q53FZ2 586 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 VWA2Q5GFL6 755 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 HIST2H3PS2Q5TEC6 136 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 AADACL4Q5VUY2 407 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 ZDHHC20Q5W0Z9 365 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 OR52W1Q6IF63 320 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 ARL9Q6T311 187 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 ENPP7Q6UWV6 458 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 ZNF852Q6ZMS4 543 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 HIST2H3AQ71DI3 136 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 ADCK2Q7Z695 626 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 DPPA2Q7Z7J5 298 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 TMPRSS11BQ86T26 416 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 SERPINA9Q86WD7 417 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 ZNF683Q8IZ20 524 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 BEST3Q8N1M1 668 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 MUC20Q8N307 709 aaPredicted RBP3.35□□□□□ -1.87
FOXN3-213ENST00000556916 BMPERQ8N8U9 685 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 INO80EQ8NBZ0 244 aaPredicted RBP3.35□□□□□ -1.87
FOXN3-213ENST00000556916 SDR9C7Q8NEX9 313 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 GPR32P1Q8NGA4 272 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 OR52B4Q8NGK2 314 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 OR52I2Q8NH67 350 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 OR6X1Q8NH79 312 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 PIGXQ8TBF5 258 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 PAQR8Q8TEZ7 354 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 S100PBPQ96BU1 408 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 PPP1R16AQ96I34 528 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 PRRC1Q96M27 445 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 OR1F2PQ96R84 312 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 CD180Q99467 661 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 S100A13Q99584 98 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 TEAD3Q99594 435 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 MAP3K3Q99759 626 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 NRIP2Q9BQI9 281 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 ACBD6Q9BR61 282 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 ZNF559Q9BR84 538 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 ZNF649Q9BS31 505 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 ADAT1Q9BUB4 502 aaKnown RBP3.35□□□□□ -1.87
FOXN3-213ENST00000556916 ZNF426Q9BUY5 554 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 PINK1Q9BXM7 581 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 CHST5Q9GZS9 411 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 METTL9Q9H1A3 318 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 UBQLN3Q9H347 655 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 C6orf106Q9H6K1 298 aaPredicted RBP3.35□□□□□ -1.87
FOXN3-213ENST00000556916 ASB8Q9H765 288 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 ISG20L2Q9H9L3 353 aaKnown RBP3.35□□□□□ -1.87
FOXN3-213ENST00000556916 PDFQ9HBH1 243 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 BPIFA1Q9NP55 256 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 MYOZ1Q9NP98 299 aaPredicted RBP3.35□□□□□ -1.87
FOXN3-213ENST00000556916 MYNNQ9NPC7 610 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 RPS10P5Q9NQ39 176 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 MIEF1Q9NQG6 463 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 MRPL17Q9NRX2 175 aaKnown RBP3.35□□□□□ -1.87
FOXN3-213ENST00000556916 MAN2C1Q9NTJ4 1040 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 TMEM100Q9NV29 134 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 HIF1ANQ9NWT6 349 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 C2orf42Q9NWW7 574 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 MRPL15Q9P015 296 aaKnown RBP3.35□□□□□ -1.87
FOXN3-213ENST00000556916 IL17CQ9P0M4 197 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 RCC2Q9P258 522 aaKnown RBP3.35□□□□□ -1.87
FOXN3-213ENST00000556916 CLEC4AQ9UMR7 237 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 A4GNTQ9UNA3 340 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 KCNIP3Q9Y2W7 256 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 PCDHGA5Q9Y5G8 931 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 LRRK1Q38SD2 2015 aa3.35□□□□□ -1.87
FOXN3-213ENST00000556916 TRBV5-4A0A0C4DH59 114 aa3.34□□□□□ -1.87
FOXN3-213ENST00000556916 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.34□□□□□ -1.87
FOXN3-213ENST00000556916 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.34□□□□□ -1.87
FOXN3-213ENST00000556916 A0A1W2PPE3 182 aa3.34□□□□□ -1.87
FOXN3-213ENST00000556916 URADA6NGE7 173 aa3.34□□□□□ -1.87
FOXN3-213ENST00000556916 OR5H14A6NHG9 310 aa3.34□□□□□ -1.87
FOXN3-213ENST00000556916 OR6C76A6NM76 312 aa3.34□□□□□ -1.87
FOXN3-213ENST00000556916 HSPB2A8KAH6 182 aa3.34□□□□□ -1.87
FOXN3-213ENST00000556916 SEC14L6B5MCN3 397 aa3.34□□□□□ -1.87
FOXN3-213ENST00000556916 F5H0A9 414 aaPredicted RBP3.34□□□□□ -1.87
FOXN3-213ENST00000556916 F8VVB4 439 aa3.34□□□□□ -1.87
FOXN3-213ENST00000556916 F8VWA3 439 aa3.34□□□□□ -1.87
FOXN3-213ENST00000556916 MKRN2OSH3BPM6 223 aa3.34□□□□□ -1.87
FOXN3-213ENST00000556916 CLDN4O14493 209 aa3.34□□□□□ -1.87
FOXN3-213ENST00000556916 OGG1O15527 345 aa3.34□□□□□ -1.87
FOXN3-213ENST00000556916 KDELR3O43731 214 aa3.34□□□□□ -1.87
FOXN3-213ENST00000556916 FADS1O60427 444 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms