RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 COG8Q96MW5 612 aa19.55■□□□□ 0.72
TDP1-216ENST00000556867 GABARAPL1Q9H0R8 117 aa19.55■□□□□ 0.72
TDP1-216ENST00000556867 PNRC2Q9NPJ4 139 aaKnown RBP19.55■□□□□ 0.72
TDP1-216ENST00000556867 HINT3Q9NQE9 182 aaKnown RBP19.55■□□□□ 0.72
TDP1-216ENST00000556867 C2CD3Q4AC94 2353 aa19.55■□□□□ 0.72
TDP1-216ENST00000556867 FAM183AA6NL82 134 aa19.54■□□□□ 0.72
TDP1-216ENST00000556867 C17orf100A8MU93 164 aa19.54■□□□□ 0.72
TDP1-216ENST00000556867 VWC2LB2RUY7 222 aa19.54■□□□□ 0.72
TDP1-216ENST00000556867 G3V2T6 193 aa19.54■□□□□ 0.72
TDP1-216ENST00000556867 SURF4O15260 269 aa19.54■□□□□ 0.72
TDP1-216ENST00000556867 HMGN1P05114 100 aa19.54■□□□□ 0.72
TDP1-216ENST00000556867 PAICSP22234 425 aaKnown RBP19.54■□□□□ 0.72
TDP1-216ENST00000556867 DAPP51397 102 aa19.54■□□□□ 0.72
TDP1-216ENST00000556867 ECH1Q13011 328 aa19.54■□□□□ 0.72
TDP1-216ENST00000556867 PCK2Q16822 640 aa19.54■□□□□ 0.72
TDP1-216ENST00000556867 ALKBH6Q3KRA9 238 aa19.54■□□□□ 0.72
TDP1-216ENST00000556867 TMEM255AQ5JRV8 349 aa19.54■□□□□ 0.72
TDP1-216ENST00000556867 LINC01590Q5TEZ4 76 aa19.54■□□□□ 0.72
TDP1-216ENST00000556867 AMIGO2Q86SJ2 522 aa19.54■□□□□ 0.72
TDP1-216ENST00000556867 ZNF786Q8N393 782 aa19.54■□□□□ 0.72
TDP1-216ENST00000556867 MAPK1IP1LQ8NDC0 245 aa19.54■□□□□ 0.72
TDP1-216ENST00000556867 UBASH3BQ8TF42 649 aa19.54■□□□□ 0.72
TDP1-216ENST00000556867 LRTOMTQ8WZ04 291 aa19.54■□□□□ 0.72
TDP1-216ENST00000556867 PITX2Q99697 317 aa19.54■□□□□ 0.72
TDP1-216ENST00000556867 PIMREGQ9BSJ6 248 aa19.54■□□□□ 0.72
TDP1-216ENST00000556867 HCAR1Q9BXC0 346 aa19.54■□□□□ 0.72
TDP1-216ENST00000556867 MT-ND5P03915 603 aa19.53■□□□□ 0.72
TDP1-216ENST00000556867 ZDHHC13Q8IUH4 622 aa19.53■□□□□ 0.72
TDP1-216ENST00000556867 ZNF511Q8NB15 262 aa19.53■□□□□ 0.72
TDP1-216ENST00000556867 OR6K6Q8NGW6 343 aa19.53■□□□□ 0.72
TDP1-216ENST00000556867 MAP6Q96JE9 813 aa19.53■□□□□ 0.72
TDP1-216ENST00000556867 ATF6BQ99941 703 aa19.53■□□□□ 0.72
TDP1-216ENST00000556867 POFUT1Q9H488 388 aa19.53■□□□□ 0.72
TDP1-216ENST00000556867 MED20Q9H944 212 aa19.53■□□□□ 0.72
TDP1-216ENST00000556867 WDR76Q9H967 626 aa19.53■□□□□ 0.72
TDP1-216ENST00000556867 CGGBP1Q9UFW8 167 aaPredicted RBP19.53■□□□□ 0.72
TDP1-216ENST00000556867 PSKH1P11801 424 aa19.52■□□□□ 0.72
TDP1-216ENST00000556867 ZNF23P17027 643 aa19.52■□□□□ 0.72
TDP1-216ENST00000556867 GIFP27352 417 aa19.52■□□□□ 0.72
TDP1-216ENST00000556867 NR4A2P43354 598 aa19.52■□□□□ 0.72
TDP1-216ENST00000556867 ENTPD1P49961 510 aa19.52■□□□□ 0.72
TDP1-216ENST00000556867 MMP15P51511 669 aa19.52■□□□□ 0.72
TDP1-216ENST00000556867 CRISP1P54107 249 aa19.52■□□□□ 0.72
TDP1-216ENST00000556867 KRTAP1-1Q07627 177 aa19.52■□□□□ 0.72
TDP1-216ENST00000556867 LOXL1Q08397 574 aaPredicted RBP19.52■□□□□ 0.72
TDP1-216ENST00000556867 KPNB1Q14974 876 aaKnown RBP19.52■□□□□ 0.72
TDP1-216ENST00000556867 CARTPTQ16568 116 aa19.52■□□□□ 0.72
TDP1-216ENST00000556867 RSPO1Q2MKA7 263 aaPredicted RBP19.52■□□□□ 0.72
TDP1-216ENST00000556867 PCGF3Q3KNV8 242 aa19.52■□□□□ 0.72
TDP1-216ENST00000556867 TEX30Q5JUR7 227 aa19.52■□□□□ 0.72
TDP1-216ENST00000556867 TMEM154Q6P9G4 183 aa19.52■□□□□ 0.72
TDP1-216ENST00000556867 OR10S1Q8NGN2 331 aa19.52■□□□□ 0.72
TDP1-216ENST00000556867 PTP4A1Q93096 173 aa19.52■□□□□ 0.72
TDP1-216ENST00000556867 TEX12Q9BXU0 123 aa19.52■□□□□ 0.72
TDP1-216ENST00000556867 NKIRAS2Q9NYR9 191 aa19.52■□□□□ 0.72
TDP1-216ENST00000556867 STARD10Q9Y365 291 aa19.52■□□□□ 0.72
TDP1-216ENST00000556867 YLPM1P49750 1951 aaKnown RBP19.52■□□□□ 0.71
TDP1-216ENST00000556867 HIVEP2P31629 2446 aa19.51■□□□□ 0.71
TDP1-216ENST00000556867 PRR23D1E9PI22 279 aaPredicted RBP19.51■□□□□ 0.71
TDP1-216ENST00000556867 NCR1O76036 304 aa19.51■□□□□ 0.71
TDP1-216ENST00000556867 HPXP02790 462 aa19.51■□□□□ 0.71
TDP1-216ENST00000556867 PRR23D2P0DMB1 279 aaPredicted RBP19.51■□□□□ 0.71
TDP1-216ENST00000556867 RPS27P42677 84 aaKnown RBP19.51■□□□□ 0.71
TDP1-216ENST00000556867 ESRRGP62508 458 aa19.51■□□□□ 0.71
TDP1-216ENST00000556867 TMEM236Q5W0B7 351 aa19.51■□□□□ 0.71
TDP1-216ENST00000556867 KDM4DQ6B0I6 523 aa19.51■□□□□ 0.71
TDP1-216ENST00000556867 PYDC1Q8WXC3 89 aa19.51■□□□□ 0.71
TDP1-216ENST00000556867 GTF3AQ92664 365 aaKnown RBP19.51■□□□□ 0.71
TDP1-216ENST00000556867 APOBEC3DQ96AK3 386 aaPredicted RBP19.51■□□□□ 0.71
TDP1-216ENST00000556867 OTULINQ96BN8 352 aa19.51■□□□□ 0.71
TDP1-216ENST00000556867 CENPNQ96H22 339 aaPredicted RBP19.51■□□□□ 0.71
TDP1-216ENST00000556867 MARCH7Q9H992 704 aa19.51■□□□□ 0.71
TDP1-216ENST00000556867 KRT84Q9NSB2 600 aa19.51■□□□□ 0.71
TDP1-216ENST00000556867 DDX28Q9NUL7 540 aaKnown RBP19.51■□□□□ 0.71
TDP1-216ENST00000556867 ZFHX3Q15911 3703 aa19.51■□□□□ 0.71
TDP1-216ENST00000556867 PLSCR5A0PG75 271 aa19.5■□□□□ 0.71
TDP1-216ENST00000556867 GLCEO94923 617 aa19.5■□□□□ 0.71
TDP1-216ENST00000556867 SPARCP09486 303 aa19.5■□□□□ 0.71
TDP1-216ENST00000556867 ACSM4P0C7M7 580 aa19.5■□□□□ 0.71
TDP1-216ENST00000556867 LIPAP38571 399 aa19.5■□□□□ 0.71
TDP1-216ENST00000556867 MAGEB1P43366 347 aa19.5■□□□□ 0.71
TDP1-216ENST00000556867 ZNF81P51508 661 aa19.5■□□□□ 0.71
TDP1-216ENST00000556867 MRPS11P82912 194 aaKnown RBP19.5■□□□□ 0.71
TDP1-216ENST00000556867 PSG7Q13046 419 aa19.5■□□□□ 0.71
TDP1-216ENST00000556867 PLBD1Q6P4A8 553 aa19.5■□□□□ 0.71
TDP1-216ENST00000556867 COLCA1Q6ZS62 124 aa19.5■□□□□ 0.71
TDP1-216ENST00000556867 DCXRQ7Z4W1 244 aa19.5■□□□□ 0.71
TDP1-216ENST00000556867 ZNF540Q8NDQ6 660 aa19.5■□□□□ 0.71
TDP1-216ENST00000556867 PLEKHA8Q96JA3 519 aa19.5■□□□□ 0.71
TDP1-216ENST00000556867 C1QTNF5Q9BXJ0 243 aa19.5■□□□□ 0.71
TDP1-216ENST00000556867 CYSLTR2Q9NS75 346 aa19.5■□□□□ 0.71
TDP1-216ENST00000556867 ZNF593O00488 134 aaPredicted RBP19.49■□□□□ 0.71
TDP1-216ENST00000556867 PRODHO43272 600 aa19.49■□□□□ 0.71
TDP1-216ENST00000556867 KITLGP21583 273 aa19.49■□□□□ 0.71
TDP1-216ENST00000556867 USF1P22415 310 aaPredicted RBP19.49■□□□□ 0.71
TDP1-216ENST00000556867 ZFP1Q6P2D0 407 aa19.49■□□□□ 0.71
TDP1-216ENST00000556867 Q71RC1 249 aaPredicted RBP19.49■□□□□ 0.71
TDP1-216ENST00000556867 OR5L1Q8NGL2 311 aa19.49■□□□□ 0.71
TDP1-216ENST00000556867 RDH5Q92781 318 aa19.49■□□□□ 0.71
TDP1-216ENST00000556867 HAVCR1Q96D42 359 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms