RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 H3F3AP84243 136 aa8.97□□□□□ -0.97
TMEM260-211ENST00000556648 FAPQ12884 760 aa8.97□□□□□ -0.97
TMEM260-211ENST00000556648 MAB21L1Q13394 359 aa8.97□□□□□ -0.97
TMEM260-211ENST00000556648 TOMM20Q15388 145 aa8.97□□□□□ -0.97
TMEM260-211ENST00000556648 ANGPT1Q15389 498 aa8.97□□□□□ -0.97
TMEM260-211ENST00000556648 BCL2A1Q16548 175 aa8.97□□□□□ -0.97
TMEM260-211ENST00000556648 LINC00303Q3SY05 128 aa8.97□□□□□ -0.97
TMEM260-211ENST00000556648 GLT8D1Q68CQ7 371 aa8.97□□□□□ -0.97
TMEM260-211ENST00000556648 ZNF704Q6ZNC4 412 aaPredicted RBP8.97□□□□□ -0.97
TMEM260-211ENST00000556648 Q6ZTK2 550 aa8.97□□□□□ -0.97
TMEM260-211ENST00000556648 RAB11FIP2Q7L804 512 aa8.97□□□□□ -0.97
TMEM260-211ENST00000556648 YRDCQ86U90 279 aaKnown RBP8.97□□□□□ -0.97
TMEM260-211ENST00000556648 LYPD6Q86Y78 171 aa8.97□□□□□ -0.97
TMEM260-211ENST00000556648 ELMOD2Q8IZ81 293 aa8.97□□□□□ -0.97
TMEM260-211ENST00000556648 ESX1Q8N693 406 aa8.97□□□□□ -0.97
TMEM260-211ENST00000556648 OR4D10Q8NGI6 311 aa8.97□□□□□ -0.97
TMEM260-211ENST00000556648 OR4D6Q8NGJ1 314 aa8.97□□□□□ -0.97
TMEM260-211ENST00000556648 DACT3Q96B18 629 aaPredicted RBP8.97□□□□□ -0.97
TMEM260-211ENST00000556648 PHF21AQ96BD5 680 aa8.97□□□□□ -0.97
TMEM260-211ENST00000556648 OR2M2Q96R28 347 aa8.97□□□□□ -0.97
TMEM260-211ENST00000556648 ING3Q9NXR8 418 aa8.97□□□□□ -0.97
TMEM260-211ENST00000556648 RABL2AQ9UBK7 228 aaPredicted RBP8.97□□□□□ -0.97
TMEM260-211ENST00000556648 ZNF222Q9UK12 451 aa8.97□□□□□ -0.97
TMEM260-211ENST00000556648 ELF5Q9UKW6 265 aaPredicted RBP8.97□□□□□ -0.97
TMEM260-211ENST00000556648 RABL2BQ9UNT1 228 aa8.97□□□□□ -0.97
TMEM260-211ENST00000556648 SDK2Q58EX2 2172 aa8.97□□□□□ -0.97
TMEM260-211ENST00000556648 A0A1B0GTI1 187 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 PINLYPA6NC86 204 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 LRRC3CA6NJW4 275 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 ZNF726A6NNF4 738 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 E9PLN8 166 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 ECDO95905 644 aaPredicted RBP8.96□□□□□ -0.98
TMEM260-211ENST00000556648 CD63P08962 238 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 ZNF883P0CG24 379 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 CD59P13987 128 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 ENPP1P22413 925 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 STOMP27105 288 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 RAD52P43351 418 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 SCAND1P57086 179 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 PSMA6P60900 246 aaKnown RBP8.96□□□□□ -0.98
TMEM260-211ENST00000556648 SNRPD2P62316 118 aaKnown RBP8.96□□□□□ -0.98
TMEM260-211ENST00000556648 MOGAT2Q3SYC2 334 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 TMEM244Q5VVB8 128 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 LAMTOR1Q6IAA8 161 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 KLHL24Q6TFL4 600 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 CREB3L2Q70SY1 520 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 RTN4RL2Q86UN3 420 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 BEST3Q8N1M1 668 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 ARMC10Q8N2F6 343 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 OR8B12Q8NGG6 310 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 OR51E1Q8TCB6 317 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 ZNF775Q96BV0 537 aaPredicted RBP8.96□□□□□ -0.98
TMEM260-211ENST00000556648 FAM210AQ96ND0 272 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 SEC22CQ9BRL7 303 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 TMEM165Q9HC07 324 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 DEPPQ9NTK1 212 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 AKAP7Q9P0M2 348 aaPredicted RBP8.96□□□□□ -0.98
TMEM260-211ENST00000556648 COPZ2Q9P299 210 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 R4GN57 208 aa8.96□□□□□ -0.98
TMEM260-211ENST00000556648 ZNF878C9JN71 531 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 LDLRAD4O15165 306 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 FABP7O15540 132 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 HPP00738 406 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 CD37P11049 281 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 PSMB1P20618 241 aaKnown RBP8.95□□□□□ -0.98
TMEM260-211ENST00000556648 HSD11B1P28845 292 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 GNALP38405 381 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 SELENOPP49908 381 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 ZNF121P58317 390 aaPredicted RBP8.95□□□□□ -0.98
TMEM260-211ENST00000556648 ZP1P60852 638 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 CHAF1BQ13112 559 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 SGCAQ16586 387 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 RSPO4Q2I0M5 234 aaPredicted RBP8.95□□□□□ -0.98
TMEM260-211ENST00000556648 PCGF3Q3KNV8 242 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 ELFN2Q5R3F8 820 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 LIX1LQ8IVB5 337 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 OR9K2Q8NGE7 335 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 OR52N4Q8NGI2 321 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 OR6M1Q8NGM8 313 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 OR2AJ1Q8NGZ0 328 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 OR56B4Q8NH76 319 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 ZFAND1Q8TCF1 268 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 DVL3Q92997 716 aaPredicted RBP8.95□□□□□ -0.98
TMEM260-211ENST00000556648 TMEM41AQ96HV5 264 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 ZNF416Q9BWM5 594 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 NIPAL2Q9H841 368 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 ZMAT3Q9HA38 289 aaKnown RBP8.95□□□□□ -0.98
TMEM260-211ENST00000556648 ZNF275Q9NSD4 429 aaPredicted RBP8.95□□□□□ -0.98
TMEM260-211ENST00000556648 GLTPQ9NZD2 209 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 CDV3Q9UKY7 258 aaKnown RBP8.95□□□□□ -0.98
TMEM260-211ENST00000556648 PCDHGA5Q9Y5G8 931 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 LOC102725191A0A1B0GVB3 256 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 FAM172BPA6NC97 362 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 WIPF3A6NGB9 483 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 H7C417 338 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 CDX4O14627 284 aaPredicted RBP8.95□□□□□ -0.98
TMEM260-211ENST00000556648 SYT7O43581 403 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 PEX14O75381 377 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 IGHEP01854 428 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 ANXA7P20073 488 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms