RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 IFITM10A6NMD0 228 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 IFITM5A6NNB3 132 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 A6NNC1 897 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 ZNF814B7Z6K7 855 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 MCRIP1C9JLW8 97 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 J3QR06 171 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 DSCR3O14972 297 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 KLK10O43240 276 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 SYT7O43581 403 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 TPST2O60704 377 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 YIF1AO95070 293 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 IFNA1P01562 189 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 CD74P04233 296 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 ICAM1P05362 532 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 SFTPBP07988 381 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 GIPP09681 153 aaPredicted RBP5.55□□□□□ -1.52
TDP1-215ENST00000556498 MPC1LP0DKB6 136 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 ESDP10768 282 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 MGMTP16455 207 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 AZGP1P25311 298 aaKnown RBP5.55□□□□□ -1.52
TDP1-215ENST00000556498 PSMB9P28065 219 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 GABRR2P28476 465 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 IMPA1P29218 277 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 OR10J1P30954 320 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 ARRB2P32121 409 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 OR1D2P34982 312 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 APLNRP35414 380 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 NUMBP49757 651 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 NDUFA6P56556 154 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 BACE1P56817 501 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 RPS13P62277 151 aaKnown RBP5.55□□□□□ -1.52
TDP1-215ENST00000556498 CDK5Q00535 292 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 ROM1Q03395 351 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 TMEM115Q12893 351 aaPredicted RBP5.55□□□□□ -1.52
TDP1-215ENST00000556498 PDE7AQ13946 482 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 KEAP1Q14145 624 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 LTC4SQ16873 150 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 C17orf99Q6UX52 265 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 COX15Q7KZN9 410 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 CXorf67Q86X51 503 aaPredicted RBP5.55□□□□□ -1.52
TDP1-215ENST00000556498 KLHDC8AQ8IYD2 350 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 OR4N4Q8N0Y3 316 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 SPICQ8N5J4 248 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 SLC35G3Q8N808 338 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 TSTD1Q8NFU3 115 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 OR4F6Q8NGB9 312 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 OR9Q2Q8NGE9 314 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 OR52B6Q8NGF0 335 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 OR6N1Q8NGY5 312 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 OR51Q1Q8NH59 317 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 EEF1AKMT1Q8WVE0 214 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 CANT1Q8WVQ1 401 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 HMGB4Q8WW32 186 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 FAM3CQ92520 227 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 IGSF8Q969P0 613 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 LENG9Q96B70 501 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 MARK4Q96L34 752 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 VSTM2LQ96N03 204 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 MUS81Q96NY9 551 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 TNFRSF13CQ96RJ3 184 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 ORAI2Q96SN7 254 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 CXorf36Q9H7Y0 433 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 PLEKHA1Q9HB21 404 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 LRTM1Q9HBL6 345 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 SEMA4BQ9NPR2 832 aaPredicted RBP5.55□□□□□ -1.52
TDP1-215ENST00000556498 SEMA4GQ9NTN9 838 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 TMEM45AQ9NWC5 275 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 CNOT2Q9NZN8 540 aaKnown RBP5.55□□□□□ -1.52
TDP1-215ENST00000556498 OR5AC2Q9NZP5 309 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 VAX2Q9UIW0 290 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 TRAPPC2LQ9UL33 140 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 V9GYH0 126 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 NWD1Q149M9 1564 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 ANKRD26Q9UPS8 1709 aa5.54□□□□□ -1.52
TDP1-215ENST00000556498 C1orf167Q5SNV9 1468 aa5.54□□□□□ -1.52
TDP1-215ENST00000556498 MYO5BQ9ULV0 1848 aa5.54□□□□□ -1.52
TDP1-215ENST00000556498 A0A0D9SG52 128 aa5.54□□□□□ -1.52
TDP1-215ENST00000556498 PSMB11A5LHX3 300 aa5.54□□□□□ -1.52
TDP1-215ENST00000556498 J3QR89 54 aa5.54□□□□□ -1.52
TDP1-215ENST00000556498 SLC1A7O00341 560 aa5.54□□□□□ -1.52
TDP1-215ENST00000556498 PLA2G10O15496 165 aa5.54□□□□□ -1.52
TDP1-215ENST00000556498 ST8SIA3O43173 380 aa5.54□□□□□ -1.52
TDP1-215ENST00000556498 TNFSF14O43557 240 aa5.54□□□□□ -1.52
TDP1-215ENST00000556498 FAM20BO75063 409 aa5.54□□□□□ -1.52
TDP1-215ENST00000556498 DUSP11O75319 330 aaKnown RBP5.54□□□□□ -1.52
TDP1-215ENST00000556498 PLA2G1BP04054 148 aaKnown RBP5.54□□□□□ -1.52
TDP1-215ENST00000556498 PPIAL4GP0DN37 164 aa5.54□□□□□ -1.52
TDP1-215ENST00000556498 RAP2AP10114 183 aa5.54□□□□□ -1.52
TDP1-215ENST00000556498 EGR1P18146 543 aa5.54□□□□□ -1.52
TDP1-215ENST00000556498 IL1RNP18510 177 aa5.54□□□□□ -1.52
TDP1-215ENST00000556498 AGXTP21549 392 aa5.54□□□□□ -1.52
TDP1-215ENST00000556498 CCKBRP32239 447 aa5.54□□□□□ -1.52
TDP1-215ENST00000556498 PTPN7P35236 360 aa5.54□□□□□ -1.52
TDP1-215ENST00000556498 RPL29P47914 159 aaKnown RBP5.54□□□□□ -1.52
TDP1-215ENST00000556498 GLRBP48167 497 aa5.54□□□□□ -1.52
TDP1-215ENST00000556498 NUDT2P50583 147 aa5.54□□□□□ -1.52
TDP1-215ENST00000556498 KCNQ1P51787 676 aa5.54□□□□□ -1.52
TDP1-215ENST00000556498 MANFP55145 182 aaKnown RBP5.54□□□□□ -1.52
TDP1-215ENST00000556498 SNRPD1P62314 119 aaKnown RBP5.54□□□□□ -1.52
TDP1-215ENST00000556498 HOXC5Q00444 222 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms