RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 C11orf65Q8NCR3 313 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 OR8G5Q8NG78 346 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 GPR32P1Q8NGA4 272 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 OR4D11Q8NGI4 311 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 C10orf82Q8WW14 230 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 SLC7A6Q92536 515 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 CENPHQ9H3R5 247 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 IKZF5Q9H5V7 419 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 SSU72Q9NP77 194 aaKnown RBP11.53□□□□□ -0.56
ACTN1-219ENST00000556432 THAP1Q9NVV9 213 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 NECAP2Q9NVZ3 263 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 VAPAQ9P0L0 249 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 VPREB3Q9UKI3 123 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 RYR3Q15413 4870 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 M0QX08 132 aa11.52□□□□□ -0.57
ACTN1-219ENST00000556432 FSTL3O95633 263 aa11.52□□□□□ -0.57
ACTN1-219ENST00000556432 GABRA5P31644 462 aa11.52□□□□□ -0.57
ACTN1-219ENST00000556432 ARF6P62330 175 aa11.52□□□□□ -0.57
ACTN1-219ENST00000556432 VSNL1P62760 191 aa11.52□□□□□ -0.57
ACTN1-219ENST00000556432 ALG10Q5BKT4 473 aa11.52□□□□□ -0.57
ACTN1-219ENST00000556432 OXLD1Q5BKU9 147 aa11.52□□□□□ -0.57
ACTN1-219ENST00000556432 SYT9Q86SS6 491 aa11.52□□□□□ -0.57
ACTN1-219ENST00000556432 GALNT4Q8N4A0 578 aa11.52□□□□□ -0.57
ACTN1-219ENST00000556432 FNDC8Q8TC99 324 aa11.52□□□□□ -0.57
ACTN1-219ENST00000556432 SLC26A7Q8TE54 656 aa11.52□□□□□ -0.57
ACTN1-219ENST00000556432 TMEM255BQ8WV15 326 aa11.52□□□□□ -0.57
ACTN1-219ENST00000556432 TOR3AQ9H497 397 aa11.52□□□□□ -0.57
ACTN1-219ENST00000556432 POLE4Q9NR33 117 aa11.52□□□□□ -0.57
ACTN1-219ENST00000556432 C20orf141Q9NUB4 165 aa11.52□□□□□ -0.57
ACTN1-219ENST00000556432 UFSP2Q9NUQ7 469 aa11.52□□□□□ -0.57
ACTN1-219ENST00000556432 AURKAIP1Q9NWT8 199 aaPredicted RBP11.52□□□□□ -0.57
ACTN1-219ENST00000556432 TENM3Q9P273 2699 aa11.51□□□□□ -0.57
ACTN1-219ENST00000556432 NPIPB13A6NJU9 1138 aa11.51□□□□□ -0.57
ACTN1-219ENST00000556432 NPIPB4C9JG80 1138 aa11.51□□□□□ -0.57
ACTN1-219ENST00000556432 ADAM20O43506 726 aa11.51□□□□□ -0.57
ACTN1-219ENST00000556432 TSPAN9O75954 239 aa11.51□□□□□ -0.57
ACTN1-219ENST00000556432 TGFBR2P37173 567 aa11.51□□□□□ -0.57
ACTN1-219ENST00000556432 PMELP40967 661 aa11.51□□□□□ -0.57
ACTN1-219ENST00000556432 TAS2R41P59536 307 aa11.51□□□□□ -0.57
ACTN1-219ENST00000556432 RPL27P61353 136 aaKnown RBP11.51□□□□□ -0.57
ACTN1-219ENST00000556432 MPP2Q14168 576 aa11.51□□□□□ -0.57
ACTN1-219ENST00000556432 KCNJ8Q15842 424 aa11.51□□□□□ -0.57
ACTN1-219ENST00000556432 IGFN1Q86VF2 1251 aa11.51□□□□□ -0.57
ACTN1-219ENST00000556432 OR5L1Q8NGL2 311 aa11.51□□□□□ -0.57
ACTN1-219ENST00000556432 SPDL1Q96EA4 605 aa11.51□□□□□ -0.57
ACTN1-219ENST00000556432 MAELQ96JY0 434 aaKnown RBP11.51□□□□□ -0.57
ACTN1-219ENST00000556432 PRSS27Q9BQR3 290 aa11.51□□□□□ -0.57
ACTN1-219ENST00000556432 SIRPDQ9H106 197 aa11.51□□□□□ -0.57
ACTN1-219ENST00000556432 SEMA6AQ9H2E6 1030 aa11.51□□□□□ -0.57
ACTN1-219ENST00000556432 PPA2Q9H2U2 334 aa11.51□□□□□ -0.57
ACTN1-219ENST00000556432 CAB39Q9Y376 341 aaPredicted RBP11.51□□□□□ -0.57
ACTN1-219ENST00000556432 A6NIZ1 184 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 H7C1C5 153 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 GPR37O15354 613 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 MLNRO43193 412 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 XPNPEP2O43895 674 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 FAM20BO75063 409 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 HLA-DPB1P04440 258 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 SCG5P05408 212 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 FBP1P09467 338 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 GPX2P18283 190 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 FPR3P25089 353 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 PSMB10P40306 273 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 RBM34P42696 430 aaKnown RBP11.5□□□□□ -0.57
ACTN1-219ENST00000556432 RAP1BP61224 184 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 LCN6P62502 163 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 RAP1AP62834 184 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 OR8B8Q15620 311 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 PAGE3Q5JUK9 113 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 INTS11Q5TA45 600 aaKnown RBP11.5□□□□□ -0.57
ACTN1-219ENST00000556432 SFRP4Q6FHJ7 346 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-219ENST00000556432 FBXW12Q6X9E4 464 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 FOXL2NBQ6ZUU3 175 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 MAVSQ7Z434 540 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 NKAIN4Q8IVV8 208 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 TMEM239Q8WW34 195 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 ZBTB9Q96C00 473 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 RASD2Q96D21 266 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 PCDHAC1Q9H158 963 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 WDR76Q9H967 626 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 TMEM100Q9NV29 134 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 CCDC167Q9P0B6 97 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 CTSZQ9UBR2 303 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 MED31Q9Y3C7 131 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 USH1CQ9Y6N9 552 aa11.5□□□□□ -0.57
ACTN1-219ENST00000556432 FBP2O00757 339 aa11.49□□□□□ -0.57
ACTN1-219ENST00000556432 SNNO75324 88 aaPredicted RBP11.49□□□□□ -0.57
ACTN1-219ENST00000556432 PAHP00439 452 aa11.49□□□□□ -0.57
ACTN1-219ENST00000556432 DBHP09172 617 aa11.49□□□□□ -0.57
ACTN1-219ENST00000556432 RGS6P49758 472 aa11.49□□□□□ -0.57
ACTN1-219ENST00000556432 CTXN1P60606 82 aa11.49□□□□□ -0.57
ACTN1-219ENST00000556432 HOXA4Q00056 320 aaPredicted RBP11.49□□□□□ -0.57
ACTN1-219ENST00000556432 COX10Q12887 443 aa11.49□□□□□ -0.57
ACTN1-219ENST00000556432 PRAMEF6Q5VXH4 476 aa11.49□□□□□ -0.57
ACTN1-219ENST00000556432 SLC35E4Q6ICL7 350 aa11.49□□□□□ -0.57
ACTN1-219ENST00000556432 BLOC1S3Q6QNY0 202 aa11.49□□□□□ -0.57
ACTN1-219ENST00000556432 VMO1Q7Z5L0 202 aa11.49□□□□□ -0.57
ACTN1-219ENST00000556432 PATL1Q86TB9 770 aaKnown RBP11.49□□□□□ -0.57
ACTN1-219ENST00000556432 PIP4P2Q8N4L2 257 aa11.49□□□□□ -0.57
ACTN1-219ENST00000556432 PCYOX1LQ8NBM8 494 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms