RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 UGT1A5P35504 534 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 NAA10P41227 235 aaPredicted RBP3.38□□□□□ -1.87
PRPF39-209ENST00000556353 NSFP46459 744 aaKnown RBP3.38□□□□□ -1.87
PRPF39-209ENST00000556353 IER3P46695 156 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 CCNG1P51959 295 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 EMP2P54851 167 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 RPL27P61353 136 aaKnown RBP3.38□□□□□ -1.87
PRPF39-209ENST00000556353 RPL23AP62750 156 aaKnown RBP3.38□□□□□ -1.87
PRPF39-209ENST00000556353 IFFO1Q0D2I5 559 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 SLC10A7Q0GE19 358 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 CDH17Q12864 832 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 GPR176Q14439 515 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 PIGHQ14442 188 aaPredicted RBP3.38□□□□□ -1.87
PRPF39-209ENST00000556353 PDK3Q15120 406 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 SSX2Q16385 188 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 ANKRD55Q3KP44 614 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 PARP15Q460N3 678 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 TMEM52BQ4KMG9 183 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 HIKESHIQ53FT3 197 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 AGBL2Q5U5Z8 902 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 DNAJC24Q6P3W2 148 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 IGFL3Q6UXB1 125 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 TMIGD1Q6UXZ0 262 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 ZNF571Q7Z3V5 609 aaPredicted RBP3.38□□□□□ -1.87
PRPF39-209ENST00000556353 HSD11B1LQ7Z5J1 315 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 ADAMTSL2Q86TH1 951 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 LINC00523Q86TU6 105 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 C17orf82Q86X59 251 aaPredicted RBP3.38□□□□□ -1.87
PRPF39-209ENST00000556353 CLYBLQ8N0X4 340 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 FAM58AQ8N1B3 248 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 GVQW1Q8N7I0 195 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 OR2L3Q8NG85 312 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 OR52N1Q8NH53 320 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 LRRC20Q8TCA0 184 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 P3H4Q92791 437 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 RAB1CQ92928 201 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 MCUR1Q96AQ8 359 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 HAVCR1Q96D42 359 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 C16orf58Q96GQ5 468 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 SLC41A3Q96GZ6 507 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 PLEKHA8Q96JA3 519 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 ZNF514Q96K75 400 aaPredicted RBP3.38□□□□□ -1.87
PRPF39-209ENST00000556353 PRRC1Q96M27 445 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 CHP1Q99653 195 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 CNPY3Q9BT09 278 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 APOOQ9BUR5 198 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 SNRNP25Q9BV90 132 aaKnown RBP3.38□□□□□ -1.87
PRPF39-209ENST00000556353 ZNF416Q9BWM5 594 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 NLNQ9BYT8 704 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 RACGAP1Q9H0H5 632 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 RAB17Q9H0T7 212 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 RDH14Q9HBH5 336 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 MRPL47Q9HD33 250 aaKnown RBP3.38□□□□□ -1.87
PRPF39-209ENST00000556353 SLC40A1Q9NP59 571 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 PNPLA3Q9NST1 481 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 RHBDL2Q9NX52 303 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 PLEK2Q9NYT0 353 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 CLEC2DQ9UHP7 191 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 PSMD13Q9UNM6 376 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 ABCG2Q9UNQ0 655 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 MOKQ9UQ07 419 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 NSD1Q96L73 2696 aaPredicted RBP3.38□□□□□ -1.87
PRPF39-209ENST00000556353 GTF3C1Q12789 2109 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 A0A0A6YYH2 397 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 A0A1W2PQ67 120 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 HELTA6NFD8 242 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 ARHGAP42A6NI28 874 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 A6NJ64 397 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 TRPC5OSA6NMA1 111 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 PDZK1P1A8MUH7 402 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 K7EQM0 130 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 MFSD11O43934 449 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 TSPAN2O60636 221 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 RLN1P04808 185 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 CALB1P05937 261 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 ALPIP09923 528 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 CTXN2P0C2S0 81 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 CCL4P13236 92 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 CCL2P13500 99 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 PSMB6P28072 239 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 MIPP30301 263 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 SERPINB1P30740 379 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 CDKN2CP42773 168 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 KCNJ3P48549 501 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 TGM4P49221 684 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 TPI1P60174 286 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 MAXP61244 160 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 SLC25A11Q02978 314 aaKnown RBP3.37□□□□□ -1.87
PRPF39-209ENST00000556353 SLC3A1Q07837 685 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 TGM3Q08188 693 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 TSPAN31Q12999 210 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 NAB1Q13506 487 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 HEPACAMQ14CZ8 416 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 SGCBQ16585 318 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 TPD52L1Q16890 204 aaPredicted RBP3.37□□□□□ -1.87
PRPF39-209ENST00000556353 SLC5A12Q1EHB4 618 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 TEX44Q53QW1 395 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 CDKL4Q5MAI5 379 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 PDZK1Q5T2W1 519 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 SULT1C3Q6IMI6 304 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms