RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 DNASE2O00115 360 aaPredicted RBP1.61□□□□□ -2.15
SCFD1-218ENST00000556256 BPY2O14599 106 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 LSM1O15116 133 aaKnown RBP1.61□□□□□ -2.15
SCFD1-218ENST00000556256 B4GALT5O43286 388 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 OXTP01178 125 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 ERCC1P07992 297 aaPredicted RBP1.61□□□□□ -2.15
SCFD1-218ENST00000556256 FGF4P08620 206 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 DUX4L2P0CJ85 424 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 DUX4L3P0CJ86 424 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 DUX4L5P0CJ88 424 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 DUX4L6P0CJ89 424 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 DUX4L7P0CJ90 424 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 ERGP11308 486 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 MUC1P15941 1255 aaPredicted RBP1.61□□□□□ -2.15
SCFD1-218ENST00000556256 GGT1P19440 569 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 RAB3AP20336 220 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 GTF2E2P29084 291 aaKnown RBP1.61□□□□□ -2.15
SCFD1-218ENST00000556256 SSTR5P35346 364 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 EIF3EP60228 445 aaKnown RBP1.61□□□□□ -2.15
SCFD1-218ENST00000556256 PPP1CBP62140 327 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 ILKQ13418 452 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 ITIH4Q14624 930 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 ORMDL2Q53FV1 153 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 ZNF684Q5T5D7 378 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 FBXW9Q5XUX1 488 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 NANOGP8Q6NSW7 305 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 TMEM53Q6P2H8 277 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 PRMT9Q6P2P2 845 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 TTC23LQ6PF05 361 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 SPESP1Q6UW49 350 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 BHLHA15Q7RTS1 189 aaPredicted RBP1.61□□□□□ -2.15
SCFD1-218ENST00000556256 SSX9Q7RTT3 188 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 OFCC1Q8IZS5 231 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 CCDC148Q8NFR7 591 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 OR52E2Q8NGJ4 325 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 OR8U1Q8NH10 309 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 EEF1AKMT3Q96AZ1 226 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 PRRC1Q96M27 445 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 CAMK2N2Q96S95 79 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 BPIFA3Q9BQP9 254 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 C11orf70Q9BRQ4 267 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 SAMD10Q9BYL1 202 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 UCK2Q9BZX2 261 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 ACTR3CQ9C0K3 210 aaPredicted RBP1.61□□□□□ -2.15
SCFD1-218ENST00000556256 SPNS1Q9H2V7 528 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 TMEM38AQ9H6F2 299 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 MRPS30Q9NP92 439 aaKnown RBP1.61□□□□□ -2.15
SCFD1-218ENST00000556256 SIRT7Q9NRC8 400 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 CLN6Q9NWW5 311 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 PTTG3PQ9NZH4 202 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 CTSFQ9UBX1 484 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 DUX4Q9UBX2 424 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 PALLDQ8WX93 1383 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 IGHV1OR15-9A0A0B4J2B8 117 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 IGKV1-8A0A0C4DH67 115 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 TMEM150BA6NC51 233 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 H7C417 338 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 RAD51BO15315 384 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 RBFOX2O43251 390 aaKnown RBP eCLIP1.6□□□□□ -2.15
SCFD1-218ENST00000556256 EIF4EP06730 217 aaKnown RBP1.6□□□□□ -2.15
SCFD1-218ENST00000556256 ADRA2AP08913 450 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 LINC00869P0C866 280 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 OR8G3PP0DMU2 310 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 SFTPCP11686 197 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 U2AF2P26368 475 aaKnown RBP eCLIP1.6□□□□□ -2.15
SCFD1-218ENST00000556256 TNFSF9P41273 254 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 UQCRFS1P47985 274 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 HCAR3P49019 387 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 P2RX1P51575 399 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 SYNJ2BPP57105 145 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 UBE2NP61088 152 aaKnown RBP1.6□□□□□ -2.15
SCFD1-218ENST00000556256 KIR2DS1Q14954 304 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 PSMD5Q16401 504 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 FAM78AQ5JUQ0 283 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 C1orf185Q5T7R7 199 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 MBOAT2Q6ZWT7 520 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 SLC16A13Q7RTY0 426 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 CDKL3Q8IVW4 592 aaPredicted RBP1.6□□□□□ -2.15
SCFD1-218ENST00000556256 PRSS58Q8IYP2 241 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 METTL13Q8N6R0 699 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 TTC29Q8NA56 475 aaPredicted RBP1.6□□□□□ -2.15
SCFD1-218ENST00000556256 CHST4Q8NCG5 386 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 OR56A4Q8NGH8 313 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 OR52K2Q8NGK3 314 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 OR6N1Q8NGY5 312 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 C17orf50Q8WW18 174 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 DEDD2Q8WXF8 326 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 PTX4Q96A99 478 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 TIMM17AQ99595 171 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 ZYG11BQ9C0D3 744 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 ACP6Q9NPH0 428 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 C20orf96Q9NUD7 363 aaPredicted RBP1.6□□□□□ -2.15
SCFD1-218ENST00000556256 DDX19AQ9NUU7 478 aaKnown RBP1.6□□□□□ -2.15
SCFD1-218ENST00000556256 MTFP1Q9UDX5 166 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 TBC1D24Q9ULP9 559 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 RCL1Q9Y2P8 373 aaKnown RBP1.6□□□□□ -2.15
SCFD1-218ENST00000556256 HMCN1Q96RW7 5635 aa1.6□□□□□ -2.15
SCFD1-218ENST00000556256 IGKV1D-17A0A075B6S4 117 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 COLCA2A8K830 154 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 L7N2F9 121 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms