RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 RAB1AP62820 205 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 CSNK2A1P68400 391 aaPredicted RBP6.05□□□□□ -1.44
SLIRP-204ENST00000555890 POU3F1Q03052 451 aaPredicted RBP6.05□□□□□ -1.44
SLIRP-204ENST00000555890 GLO1Q04760 184 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 MXD1Q05195 221 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 SLC3A1Q07837 685 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 CDC20Q12834 499 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 HSPB2Q16082 182 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 ZNF239Q16600 458 aaKnown RBP6.05□□□□□ -1.44
SLIRP-204ENST00000555890 FAM209BQ5JX69 171 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 SPANXN2Q5MJ10 180 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 DCAF10Q5QP82 559 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 B3GNTL1Q67FW5 361 aaPredicted RBP6.05□□□□□ -1.44
SLIRP-204ENST00000555890 DMKNQ6E0U4 476 aaPredicted RBP6.05□□□□□ -1.44
SLIRP-204ENST00000555890 SLC18B1Q6NT16 456 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 ZNF544Q6NX49 715 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 MZT2AQ6P582 158 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 TMPPEQ6ZT21 453 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 ASB18Q6ZVZ8 466 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 CEACAM19Q7Z692 300 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 CDC20BQ86Y33 519 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 TIGD4Q8IY51 512 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 KDM8Q8N371 416 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 YIPF7Q8N8F6 280 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 Q8NA96 180 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 CLEC1AQ8NC01 280 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 OR5M1Q8NGP8 315 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 NEIL3Q8TAT5 605 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 ABHD4Q8TB40 342 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 FNDC8Q8TC99 324 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 SMAP2Q8WU79 429 aaPredicted RBP6.05□□□□□ -1.44
SLIRP-204ENST00000555890 ZNRF4Q8WWF5 429 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 ASB10Q8WXI3 467 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 PHYHIPQ92561 330 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 SLC25A46Q96AG3 418 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 PELI1Q96FA3 418 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 TRMT61AQ96FX7 289 aaKnown RBP6.05□□□□□ -1.44
SLIRP-204ENST00000555890 OXGR1Q96P68 337 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 NPAS1Q99742 590 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 KCNS3Q9BQ31 491 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 UTP23Q9BRU9 249 aaKnown RBP6.05□□□□□ -1.44
SLIRP-204ENST00000555890 TTYH2Q9BSA4 534 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 HDHD5Q9BXW7 423 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 TPK1Q9H3S4 243 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 PROK2Q9HC23 129 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 BOKQ9UMX3 212 aaPredicted RBP6.05□□□□□ -1.44
SLIRP-204ENST00000555890 COPS3Q9UNS2 423 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 RASD1Q9Y272 281 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 MRPS18CQ9Y3D5 142 aaKnown RBP6.05□□□□□ -1.44
SLIRP-204ENST00000555890 HIVEP2P31629 2446 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 SVEP1Q4LDE5 3571 aa6.05□□□□□ -1.44
SLIRP-204ENST00000555890 KIAA1549Q9HCM3 1950 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 FREM3P0C091 2139 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 IGLV1-36A0A0B4J1U3 117 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 LOC102725191A0A1B0GVB3 256 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 IQCMA0A1B0GVH7 501 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 OR2M5A3KFT3 312 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 AQP7P3A6NL99 342 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 INAFM1C9JVW0 142 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 E9PI62 339 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 LOC110117498-PIK3R3F6TDL0 507 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 G3V3Y1 287 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 J3QRK9 145 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 MASP2O00187 686 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 DCTN6O00399 190 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 ZNF593O00488 134 aaPredicted RBP6.04□□□□□ -1.44
SLIRP-204ENST00000555890 RGS5O15539 181 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 DNPH1O43598 174 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 ZIC3O60481 467 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 GATBO75879 557 aaKnown RBP6.04□□□□□ -1.44
SLIRP-204ENST00000555890 ARL6IP5O75915 188 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 ZNF432O94892 652 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 OPN1LWP04000 364 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 CELA3BP08861 270 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 NR2C1P13056 603 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 ZNF12P17014 697 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 ZNF43P17038 809 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 ALOX5APP20292 161 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 SFTPDP35247 375 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 DNASE1L1P49184 302 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 GDI2P50395 445 aaKnown RBP6.04□□□□□ -1.44
SLIRP-204ENST00000555890 PPP5CP53041 499 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 RRADP55042 308 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 BIDP55957 195 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 ADAM8P78325 824 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 TLE4Q04727 773 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 HNRNPA0Q13151 305 aaKnown RBP6.04□□□□□ -1.44
SLIRP-204ENST00000555890 MELKQ14680 651 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 CDK5R1Q15078 307 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 ACSM3Q53FZ2 586 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 THEM4Q5T1C6 240 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 RAET1LQ5VY80 246 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 VASNQ6EMK4 673 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 KCTD18Q6PI47 426 aaPredicted RBP6.04□□□□□ -1.44
SLIRP-204ENST00000555890 FAM180AQ6UWF9 173 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 TMEM91Q6ZNR0 172 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 SSX6Q7RTT6 188 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 MDGA2Q7Z553 956 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 TPRA1Q86W33 373 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 OR10H5Q8NGA6 315 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms