RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 CXorf67Q86X51 503 aaPredicted RBP8.92□□□□□ -0.98
SRP54-208ENST00000555557 ANKRD13BQ86YJ7 626 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 BCL2L2Q92843 193 aaPredicted RBP8.92□□□□□ -0.98
SRP54-208ENST00000555557 ISOC1Q96CN7 298 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 TRMT61AQ96FX7 289 aaKnown RBP8.92□□□□□ -0.98
SRP54-208ENST00000555557 DCLRE1CQ96SD1 692 aaKnown RBP8.92□□□□□ -0.98
SRP54-208ENST00000555557 VKORC1Q9BQB6 163 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 SFXN3Q9BWM7 321 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 KCNN2Q9H2S1 579 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 RNF121Q9H920 327 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 NOX3Q9HBY0 568 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 NDUFB11Q9NX14 153 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 FRRS1LQ9P0K9 344 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 GTF2A1LQ9UNN4 478 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 MEMO1Q9Y316 297 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 SF3B6Q9Y3B4 125 aaKnown RBP8.92□□□□□ -0.98
SRP54-208ENST00000555557 TIMM10BQ9Y5J6 103 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 N6AMT1Q9Y5N5 214 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 LOC100506127A0A0U1RQW1 187 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 EEF1E1-BLOC1S5C9J1V9 151 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 F5H5K5 113 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 DVL2O14641 736 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 ATXN7O15265 892 aaPredicted RBP8.92□□□□□ -0.98
SRP54-208ENST00000555557 OGG1O15527 345 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 EEF1E1O43324 174 aaKnown RBP8.92□□□□□ -0.98
SRP54-208ENST00000555557 SGCEO43556 437 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 PLPP2O43688 288 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 GPX5O75715 221 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 PRB1P04280 392 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 CD8BP10966 210 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 SLC2A1P11166 492 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 ANOS1P23352 680 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 CA7P43166 264 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 CASP6P55212 293 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 IGFBP7Q16270 282 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 RSPO1Q2MKA7 263 aaPredicted RBP8.92□□□□□ -0.98
SRP54-208ENST00000555557 EIF2S3LQ2VIR3 472 aaKnown RBP8.92□□□□□ -0.98
SRP54-208ENST00000555557 TBRG1Q3YBR2 411 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 NRN1LQ496H8 165 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 ELFN2Q5R3F8 820 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 RPL22L1Q6P5R6 122 aaKnown RBP8.92□□□□□ -0.98
SRP54-208ENST00000555557 ANKRD16Q6P6B7 361 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 RDH10Q8IZV5 341 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 PRSS35Q8N3Z0 413 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 ZNF433Q8N7K0 673 aaPredicted RBP8.92□□□□□ -0.98
SRP54-208ENST00000555557 OR13C5Q8NGS8 318 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 OR2G2Q8NGZ5 317 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 RND1Q92730 232 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 GHSRQ92847 366 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 PGLYRP3Q96LB9 341 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 DMRTA2Q96SC8 542 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 ATF6BQ99941 703 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 CHCHD6Q9BRQ6 235 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 HDHD5Q9BXW7 423 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 OR2H1Q9GZK4 316 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 WNT5BQ9H1J7 359 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 RSL24D1Q9UHA3 163 aaKnown RBP8.92□□□□□ -0.98
SRP54-208ENST00000555557 ENPP5Q9UJA9 477 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 SLC22A13Q9Y226 551 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 FASNP49327 2511 aaKnown RBP8.91□□□□□ -0.98
SRP54-208ENST00000555557 TMEM269A0A1B0GVZ9 245 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 HSPB2A8KAH6 182 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 CCL21O00585 134 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 AIREO43918 545 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 ZNF254O75437 659 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 SRSF10O75494 262 aaKnown RBP8.91□□□□□ -0.98
SRP54-208ENST00000555557 ZFPL1O95159 310 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 CNOT4O95628 575 aaKnown RBP8.91□□□□□ -0.98
SRP54-208ENST00000555557 COX5AP20674 150 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 PSMA1P25786 263 aaKnown RBP8.91□□□□□ -0.98
SRP54-208ENST00000555557 HSD11B1P28845 292 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 OPRM1P35372 400 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 CRYBB2P43320 205 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 MAGEB1P43366 347 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 GDI2P50395 445 aaKnown RBP8.91□□□□□ -0.98
SRP54-208ENST00000555557 TAS2R43P59537 309 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 PCBD1P61457 104 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 VBP1P61758 197 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 NCS1P62166 190 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 RAB1AP62820 205 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 SCRN3Q0VDG4 424 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 ALKBH1Q13686 389 aaKnown RBP8.91□□□□□ -0.98
SRP54-208ENST00000555557 HSPB2Q16082 182 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 GABRA6Q16445 453 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 CTF1Q16619 201 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 SLC36A2Q495M3 483 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 CCDC58Q4VC31 144 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 PABPC1L2AQ5JQF8 200 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 WDR38Q5JTN6 314 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 DEGS2Q6QHC5 323 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 BEND4Q6ZU67 534 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 CROCCP3Q8IVE0 287 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 CPEB3Q8NE35 698 aaKnown RBP8.91□□□□□ -0.98
SRP54-208ENST00000555557 C12orf43Q96C57 262 aaKnown RBP8.91□□□□□ -0.98
SRP54-208ENST00000555557 SMIM19Q96E16 107 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 CENPOQ9BU64 300 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 EXOSC4Q9NPD3 245 aaKnown RBP8.91□□□□□ -0.98
SRP54-208ENST00000555557 PCNX1Q96RV3 2341 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 MYO7BQ6PIF6 2116 aa8.91□□□□□ -0.98
SRP54-208ENST00000555557 hCG_2014768A0A024R1R8 64 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms