RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 PSG7Q13046 419 aa17.46■□□□□ 0.39
VTI1B-205ENST00000555543 MOGQ16653 247 aa17.46■□□□□ 0.39
VTI1B-205ENST00000555543 TSTQ16762 297 aaKnown RBP17.46■□□□□ 0.39
VTI1B-205ENST00000555543 PCGF3Q3KNV8 242 aa17.46■□□□□ 0.39
VTI1B-205ENST00000555543 SLC36A3Q495N2 470 aa17.46■□□□□ 0.39
VTI1B-205ENST00000555543 CYB5R2Q6BCY4 276 aa17.46■□□□□ 0.39
VTI1B-205ENST00000555543 PRIMA1Q86XR5 153 aa17.46■□□□□ 0.39
VTI1B-205ENST00000555543 IQCF1Q8N6M8 205 aa17.46■□□□□ 0.39
VTI1B-205ENST00000555543 PAPD5Q8NDF8 572 aaKnown RBP17.46■□□□□ 0.39
VTI1B-205ENST00000555543 PROKR2Q8NFJ6 384 aa17.46■□□□□ 0.39
VTI1B-205ENST00000555543 OR2T33Q8NG76 320 aa17.46■□□□□ 0.39
VTI1B-205ENST00000555543 OR51L1Q8NGJ5 315 aa17.46■□□□□ 0.39
VTI1B-205ENST00000555543 MSI2Q96DH6 328 aaKnown RBP17.46■□□□□ 0.39
VTI1B-205ENST00000555543 COQ7Q99807 217 aa17.46■□□□□ 0.39
VTI1B-205ENST00000555543 RBM4Q9BWF3 364 aaKnown RBP17.46■□□□□ 0.39
VTI1B-205ENST00000555543 PDP1Q9P0J1 537 aaPredicted RBP17.46■□□□□ 0.39
VTI1B-205ENST00000555543 CYB5R1Q9UHQ9 305 aa17.46■□□□□ 0.39
VTI1B-205ENST00000555543 MALRD1Q5VYJ5 2156 aa17.45■□□□□ 0.38
VTI1B-205ENST00000555543 TVP23AA6NH52 213 aa17.45■□□□□ 0.38
VTI1B-205ENST00000555543 GNGT2O14610 69 aa17.45■□□□□ 0.38
VTI1B-205ENST00000555543 SPRY3O43610 288 aa17.45■□□□□ 0.38
VTI1B-205ENST00000555543 CDC14BO60729 498 aa17.45■□□□□ 0.38
VTI1B-205ENST00000555543 MT-ND5P03915 603 aa17.45■□□□□ 0.38
VTI1B-205ENST00000555543 GZMKP49863 264 aa17.45■□□□□ 0.38
VTI1B-205ENST00000555543 RSPO1Q2MKA7 263 aaPredicted RBP17.45■□□□□ 0.38
VTI1B-205ENST00000555543 NMNAT2Q9BZQ4 307 aa17.45■□□□□ 0.38
VTI1B-205ENST00000555543 MSL2Q9HCI7 577 aa17.45■□□□□ 0.38
VTI1B-205ENST00000555543 PNRC2Q9NPJ4 139 aaKnown RBP17.45■□□□□ 0.38
VTI1B-205ENST00000555543 KLHL21Q9UJP4 597 aa17.45■□□□□ 0.38
VTI1B-205ENST00000555543 BAIAP2Q9UQB8 552 aa17.45■□□□□ 0.38
VTI1B-205ENST00000555543 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.44■□□□□ 0.38
VTI1B-205ENST00000555543 PLSCR5A0PG75 271 aa17.44■□□□□ 0.38
VTI1B-205ENST00000555543 GYPBP06028 91 aa17.44■□□□□ 0.38
VTI1B-205ENST00000555543 CLUP10909 449 aa17.44■□□□□ 0.38
VTI1B-205ENST00000555543 HOXB6P17509 224 aaKnown RBP17.44■□□□□ 0.38
VTI1B-205ENST00000555543 GPR6P46095 362 aaPredicted RBP17.44■□□□□ 0.38
VTI1B-205ENST00000555543 CHN2P52757 468 aa17.44■□□□□ 0.38
VTI1B-205ENST00000555543 KRTAP27-1Q3LI81 207 aa17.44■□□□□ 0.38
VTI1B-205ENST00000555543 OR10S1Q8NGN2 331 aa17.44■□□□□ 0.38
VTI1B-205ENST00000555543 OR2T4Q8NH00 348 aa17.44■□□□□ 0.38
VTI1B-205ENST00000555543 MAP6Q96JE9 813 aa17.44■□□□□ 0.38
VTI1B-205ENST00000555543 DCLRE1CQ96SD1 692 aaKnown RBP17.44■□□□□ 0.38
VTI1B-205ENST00000555543 CACNG2Q9Y698 323 aa17.44■□□□□ 0.38
VTI1B-205ENST00000555543 COMMD3-BMI1R4GMX3 469 aa17.44■□□□□ 0.38
VTI1B-205ENST00000555543 CUBNO60494 3623 aa17.44■□□□□ 0.38
VTI1B-205ENST00000555543 WNT9BO14905 357 aa17.43■□□□□ 0.38
VTI1B-205ENST00000555543 TIMM8AO60220 97 aaPredicted RBP17.43■□□□□ 0.38
VTI1B-205ENST00000555543 E2F6O75461 281 aa17.43■□□□□ 0.38
VTI1B-205ENST00000555543 SPI1P17947 270 aa17.43■□□□□ 0.38
VTI1B-205ENST00000555543 PRKACGP22612 351 aa17.43■□□□□ 0.38
VTI1B-205ENST00000555543 CCNIQ14094 377 aa17.43■□□□□ 0.38
VTI1B-205ENST00000555543 SPRNQ5BIV9 151 aa17.43■□□□□ 0.38
VTI1B-205ENST00000555543 USP51Q70EK9 711 aa17.43■□□□□ 0.38
VTI1B-205ENST00000555543 OR2AJ1Q8NGZ0 328 aa17.43■□□□□ 0.38
VTI1B-205ENST00000555543 TEX47Q8TBZ9 253 aa17.43■□□□□ 0.38
VTI1B-205ENST00000555543 CMBLQ96DG6 245 aa17.43■□□□□ 0.38
VTI1B-205ENST00000555543 PITX2Q99697 317 aa17.43■□□□□ 0.38
VTI1B-205ENST00000555543 CDADC1Q9BWV3 514 aa17.43■□□□□ 0.38
VTI1B-205ENST00000555543 HCAR1Q9BXC0 346 aa17.43■□□□□ 0.38
VTI1B-205ENST00000555543 NARFLQ9H6Q4 476 aa17.43■□□□□ 0.38
VTI1B-205ENST00000555543 WDR76Q9H967 626 aa17.43■□□□□ 0.38
VTI1B-205ENST00000555543 SAP30LQ9HAJ7 183 aa17.43■□□□□ 0.38
VTI1B-205ENST00000555543 NTN4Q9HB63 628 aa17.43■□□□□ 0.38
VTI1B-205ENST00000555543 CMC2Q9NRP2 79 aa17.43■□□□□ 0.38
VTI1B-205ENST00000555543 DNAJB9Q9UBS3 223 aa17.43■□□□□ 0.38
VTI1B-205ENST00000555543 PURGQ9UJV8 347 aaKnown RBP17.43■□□□□ 0.38
VTI1B-205ENST00000555543 IGHV1-69-2A0A0G2JMI3 117 aa17.42■□□□□ 0.38
VTI1B-205ENST00000555543 LOC100289279A0A1B0GTE1 492 aa17.42■□□□□ 0.38
VTI1B-205ENST00000555543 H3BN98 237 aa17.42■□□□□ 0.38
VTI1B-205ENST00000555543 J3QW42 95 aa17.42■□□□□ 0.38
VTI1B-205ENST00000555543 TPD52L2O43399 206 aaKnown RBP17.42■□□□□ 0.38
VTI1B-205ENST00000555543 PPIHO43447 177 aaKnown RBP17.42■□□□□ 0.38
VTI1B-205ENST00000555543 ADH4P08319 380 aa17.42■□□□□ 0.38
VTI1B-205ENST00000555543 KITLGP21583 273 aa17.42■□□□□ 0.38
VTI1B-205ENST00000555543 TUBG1P23258 451 aa17.42■□□□□ 0.38
VTI1B-205ENST00000555543 CRYBB2P43320 205 aa17.42■□□□□ 0.38
VTI1B-205ENST00000555543 RGS6P49758 472 aa17.42■□□□□ 0.38
VTI1B-205ENST00000555543 SLC25A1P53007 311 aa17.42■□□□□ 0.38
VTI1B-205ENST00000555543 HNRNPA0Q13151 305 aaKnown RBP17.42■□□□□ 0.38
VTI1B-205ENST00000555543 HLXQ14774 488 aaPredicted RBP17.42■□□□□ 0.38
VTI1B-205ENST00000555543 FAM209AQ5JX71 171 aa17.42■□□□□ 0.38
VTI1B-205ENST00000555543 Q6ZR03 302 aa17.42■□□□□ 0.38
VTI1B-205ENST00000555543 ZNF511Q8NB15 262 aa17.42■□□□□ 0.38
VTI1B-205ENST00000555543 ATF6BQ99941 703 aa17.42■□□□□ 0.38
VTI1B-205ENST00000555543 YY1AP1Q9H869 796 aa17.42■□□□□ 0.38
VTI1B-205ENST00000555543 MED20Q9H944 212 aa17.42■□□□□ 0.38
VTI1B-205ENST00000555543 TUBG2Q9NRH3 451 aa17.42■□□□□ 0.38
VTI1B-205ENST00000555543 CYSLTR2Q9NS75 346 aa17.42■□□□□ 0.38
VTI1B-205ENST00000555543 DECR2Q9NUI1 292 aa17.42■□□□□ 0.38
VTI1B-205ENST00000555543 PTTG3PQ9NZH4 202 aa17.42■□□□□ 0.38
VTI1B-205ENST00000555543 CGGBP1Q9UFW8 167 aaPredicted RBP17.42■□□□□ 0.38
VTI1B-205ENST00000555543 KCNG2Q9UJ96 466 aa17.42■□□□□ 0.38
VTI1B-205ENST00000555543 FAM183AA6NL82 134 aa17.41■□□□□ 0.38
VTI1B-205ENST00000555543 RIIAD1A6NNX1 92 aa17.41■□□□□ 0.38
VTI1B-205ENST00000555543 TIPRLO75663 272 aa17.41■□□□□ 0.38
VTI1B-205ENST00000555543 ACSM4P0C7M7 580 aa17.41■□□□□ 0.38
VTI1B-205ENST00000555543 ZNF823P16415 610 aa17.41■□□□□ 0.38
VTI1B-205ENST00000555543 IGFBP5P24593 272 aa17.41■□□□□ 0.38
VTI1B-205ENST00000555543 GRK5P34947 590 aa17.41■□□□□ 0.38
VTI1B-205ENST00000555543 TMEM33P57088 247 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms