RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 ZNF595Q8IYB9 648 aa15.29■□□□□ 0.04
PPP4R3A-208ENST00000555462 OR51F2Q8NH61 342 aa15.29■□□□□ 0.04
PPP4R3A-208ENST00000555462 RRNAD1Q96FB5 475 aaKnown RBP15.29■□□□□ 0.04
PPP4R3A-208ENST00000555462 OR8B4Q96RC9 309 aa15.29■□□□□ 0.04
PPP4R3A-208ENST00000555462 ST6GALNAC5Q9BVH7 336 aa15.29■□□□□ 0.04
PPP4R3A-208ENST00000555462 TAS2R8Q9NYW2 309 aa15.29■□□□□ 0.04
PPP4R3A-208ENST00000555462 PTPRSQ13332 1948 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 OR6C65A6NJZ3 312 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 PMS2P2O95744 297 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 KNG1P01042 644 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 ITGB2P05107 769 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 GP1BAP07359 652 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 SFTPBP07988 381 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 RPA2P15927 270 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 ABOP16442 354 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 NME2P22392 152 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 IL12BP29460 328 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 DLX2Q07687 328 aaPredicted RBP15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 C9orf50Q5SZB4 431 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 FAM69BQ5VUD6 431 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 C19orf47Q8N9M1 422 aaKnown RBP15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 LMF2Q9BU23 707 aaKnown RBP15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 CLDN16Q9Y5I7 305 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 DIDO1Q9BTC0 2240 aaKnown RBP15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 C2orf16Q68DN1 1984 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 MPIG6BO95866 241 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 GNRH1P01148 92 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 DAOP14920 347 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 CSRP1P21291 193 aaKnown RBP15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 CDAP32320 146 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 ACTBP60709 375 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 ACTG1P63261 375 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 RASGEF1BQ0VAM2 473 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 ZNF679Q8IYX0 411 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 OR5M8Q8NGP6 311 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 GAREM1Q9H706 876 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 ELL3Q9HB65 397 aaPredicted RBP15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 SLC33A1O00400 549 aaPredicted RBP15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 RCC1P18754 421 aaPredicted RBP15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 FOXK1P85037 733 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 SLC29A4Q7RTT9 530 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 BATF2Q8N1L9 274 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 EID2Q8N6I1 236 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 DOCK7Q96N67 2140 aa15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 ESRP2Q9H6T0 727 aaKnown RBP15.28■□□□□ 0.04
PPP4R3A-208ENST00000555462 IGHV5-51A0A0C4DH38 117 aa15.27■□□□□ 0.04
PPP4R3A-208ENST00000555462 PRSS37A4D1T9 235 aa15.27■□□□□ 0.04
PPP4R3A-208ENST00000555462 THEGLP0DJG4 465 aa15.27■□□□□ 0.04
PPP4R3A-208ENST00000555462 AIMP2Q13155 320 aaKnown RBP15.27■□□□□ 0.04
PPP4R3A-208ENST00000555462 ELOCQ15369 112 aa15.27■□□□□ 0.04
PPP4R3A-208ENST00000555462 NKAPLQ5M9Q1 402 aa15.27■□□□□ 0.04
PPP4R3A-208ENST00000555462 FAM71F1Q96KD3 344 aaPredicted RBP15.27■□□□□ 0.04
PPP4R3A-208ENST00000555462 CRB3Q9BUF7 120 aa15.27■□□□□ 0.04
PPP4R3A-208ENST00000555462 POLR1DQ9Y2S0 133 aa15.27■□□□□ 0.04
PPP4R3A-208ENST00000555462 FAM221BA6H8Z2 402 aa15.27■□□□□ 0.03
PPP4R3A-208ENST00000555462 NAXDQ8IW45 347 aa15.27■□□□□ 0.03
PPP4R3A-208ENST00000555462 ZNF615Q8N8J6 731 aa15.27■□□□□ 0.03
PPP4R3A-208ENST00000555462 TMEM104Q8NE00 496 aa15.27■□□□□ 0.03
PPP4R3A-208ENST00000555462 MRGPRFQ96AM1 343 aa15.27■□□□□ 0.03
PPP4R3A-208ENST00000555462 VSX1Q9NZR4 365 aaPredicted RBP15.27■□□□□ 0.03
PPP4R3A-208ENST00000555462 TNFSF18Q9UNG2 199 aa15.27■□□□□ 0.03
PPP4R3A-208ENST00000555462 SHANK1Q9Y566 2161 aa15.27■□□□□ 0.03
PPP4R3A-208ENST00000555462 ZNF98A6NK75 572 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 ZNF735P0CB33 412 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 ZNF823P16415 610 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 RAB3AP20336 220 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 CD1CP29017 333 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 POU3F1Q03052 451 aaPredicted RBP15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 EBPQ15125 230 aaKnown RBP15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 ZNF585AQ6P3V2 769 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 TMEM17Q86X19 198 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 PHYHIPQ92561 330 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 C5orf34Q96MH7 638 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 NUDT9Q9BW91 350 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 BARX1Q9HBU1 254 aaPredicted RBP15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 CHMP1AQ9HD42 196 aaPredicted RBP15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 UPB1Q9UBR1 384 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 KCNK7Q9Y2U2 307 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 LDOC1O95751 146 aaPredicted RBP15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 TNFP01375 233 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 SPP1P10451 314 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 FBXW4P57775 412 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 NSDHLQ15738 373 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 PAN3Q58A45 887 aaKnown RBP15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 HLA-DQA1Q5Y7H0 255 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 SLC16A13Q7RTY0 426 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 ZNF784Q8NCA9 323 aaPredicted RBP15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 SEMA6DQ8NFY4 1073 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 PTPMT1Q8WUK0 201 aaPredicted RBP15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 AHCTF1Q8WYP5 2266 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 C9orf170A2RU37 121 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 EIF4E2O60573 245 aaKnown RBP15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 UBBP0CG47 229 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 UBCP0CG48 685 aaKnown RBP15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 CAPZA2P47755 286 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 PRTGQ2VWP7 1150 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 DEFB133Q30KQ1 61 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 AWAT2Q6E213 333 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 LANCL3Q6ZV70 420 aa15.26■□□□□ 0.03
PPP4R3A-208ENST00000555462 ADAT3Q96EY9 351 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms