RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 CA5BP1Q8WTZ4 195 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 GLYATL2Q8WU03 294 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.48□□□□□ -1.85
VRK1-205ENST00000555402 NRBF2Q96F24 287 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 CYYR1Q96J86 154 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 PARP12Q9H0J9 701 aaKnown RBP3.48□□□□□ -1.85
VRK1-205ENST00000555402 TMEM38AQ9H6F2 299 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 SYNDIG1Q9H7V2 258 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 NOX3Q9HBY0 568 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 SLC40A1Q9NP59 571 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 ACP6Q9NPH0 428 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 RBAKQ9NYW8 714 aaPredicted RBP3.48□□□□□ -1.85
VRK1-205ENST00000555402 PEF1Q9UBV8 284 aaKnown RBP3.48□□□□□ -1.85
VRK1-205ENST00000555402 IGHV3-74A0A0B4J1X5 117 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 HSBP1L1C9JCN9 74 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 ANGPTL7O43827 346 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 CDC40O60508 579 aaKnown RBP eCLIP3.47□□□□□ -1.85
VRK1-205ENST00000555402 SPAG7O75391 227 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 CRYGCP07315 174 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 CTRB1P17538 263 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 PRKACBP22694 351 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 CPN2P22792 545 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 U2AF2P26368 475 aaKnown RBP eCLIP3.47□□□□□ -1.85
VRK1-205ENST00000555402 TNFSF9P41273 254 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 RAB7AP51149 207 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 ZNF138P52744 262 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 RAB11AP62491 216 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 RCAN2Q14206 197 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 RAB11BQ15907 218 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 NKAIN1Q4KMZ8 207 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 HIKESHIQ53FT3 197 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 METTL21CQ5VZV1 264 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 TCAIMQ8N3R3 496 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 CBR4Q8N4T8 237 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 SNX31Q8N9S9 440 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 OR51E1Q8TCB6 317 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 NTAN1Q96AB6 310 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 TM4SF18Q96CE8 201 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 BLZF1Q9H2G9 400 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 TPK1Q9H3S4 243 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 LZTFL1Q9NQ48 299 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 ZC4H2Q9NQZ6 224 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 CTSFQ9UBX1 484 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 GMEB1Q9Y692 573 aa3.47□□□□□ -1.85
VRK1-205ENST00000555402 V9GYY5 206 aaPredicted RBP3.47□□□□□ -1.85
VRK1-205ENST00000555402 ARHGAP21Q5T5U3 1957 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.46□□□□□ -1.86
VRK1-205ENST00000555402 A0A096LNJ9 63 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 IGKV6D-21A0A0A0MT36 114 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 IGLV1-36A0A0B4J1U3 117 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 IGHV3-66A0A0C4DH42 116 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 TMEM120BA0PK00 339 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 TSPAN11A1L157 253 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 OR6C74A6NCV1 312 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 YKT6O15498 198 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 SLC25A14O95258 325 aaPredicted RBP3.46□□□□□ -1.86
VRK1-205ENST00000555402 YEATS4O95619 227 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 KRT16P08779 473 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 PRKACAP17612 351 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 CSNK2A2P19784 350 aaPredicted RBP3.46□□□□□ -1.86
VRK1-205ENST00000555402 MSR1P21757 451 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 RAP1AP62834 184 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 ARG2P78540 354 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 MADCAM1Q13477 382 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 TRMT5Q32P41 509 aaKnown RBP3.46□□□□□ -1.86
VRK1-205ENST00000555402 AGBL2Q5U5Z8 902 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 FAM92BQ6ZTR7 304 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 MBOAT2Q6ZWT7 520 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 ABHD12BQ7Z5M8 362 aaPredicted RBP3.46□□□□□ -1.86
VRK1-205ENST00000555402 SPATA24Q86W54 205 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 CSGALNACT2Q8N6G5 542 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 METTL13Q8N6R0 699 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 CHST4Q8NCG5 386 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 OR56A4Q8NGH8 313 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 OR52E2Q8NGJ4 325 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 ZNF596Q8TC21 504 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 ZNF707Q96C28 371 aaPredicted RBP3.46□□□□□ -1.86
VRK1-205ENST00000555402 C8orf33Q9H7E9 229 aaPredicted RBP3.46□□□□□ -1.86
VRK1-205ENST00000555402 CYP3A43Q9HB55 503 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 UBAP1Q9NZ09 502 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 RCL1Q9Y2P8 373 aaKnown RBP3.46□□□□□ -1.86
VRK1-205ENST00000555402 CARMIL3Q8ND23 1372 aa3.46□□□□□ -1.86
VRK1-205ENST00000555402 MN1Q10571 1320 aaPredicted RBP3.45□□□□□ -1.86
VRK1-205ENST00000555402 MTCL1Q9Y4B5 1905 aaKnown RBP3.45□□□□□ -1.86
VRK1-205ENST00000555402 IGHV5-51A0A0C4DH38 117 aa3.45□□□□□ -1.86
VRK1-205ENST00000555402 A0A1W2PRD5 423 aa3.45□□□□□ -1.86
VRK1-205ENST00000555402 K7EMT4 169 aa3.45□□□□□ -1.86
VRK1-205ENST00000555402 ZNF701M0R085 212 aaPredicted RBP3.45□□□□□ -1.86
VRK1-205ENST00000555402 BCKDKO14874 412 aa3.45□□□□□ -1.86
VRK1-205ENST00000555402 BCHEP06276 602 aa3.45□□□□□ -1.86
VRK1-205ENST00000555402 SRMP19623 302 aa3.45□□□□□ -1.86
VRK1-205ENST00000555402 TUBG1P23258 451 aa3.45□□□□□ -1.86
VRK1-205ENST00000555402 RFC3P40938 356 aa3.45□□□□□ -1.86
VRK1-205ENST00000555402 BCAP31P51572 246 aa3.45□□□□□ -1.86
VRK1-205ENST00000555402 MNAT1P51948 309 aa3.45□□□□□ -1.86
VRK1-205ENST00000555402 UBE2NP61088 152 aaKnown RBP3.45□□□□□ -1.86
VRK1-205ENST00000555402 XIAPP98170 497 aa3.45□□□□□ -1.86
VRK1-205ENST00000555402 SEMG2Q02383 582 aa3.45□□□□□ -1.86
VRK1-205ENST00000555402 ART3Q13508 389 aa3.45□□□□□ -1.86
VRK1-205ENST00000555402 ZNF266Q14584 549 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms