RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 PAQR4Q8N4S7 273 aaPredicted RBP10.96□□□□□ -0.65
SYNE2-219ENST00000555323 C4orf45Q96LM5 186 aa10.96□□□□□ -0.65
SYNE2-219ENST00000555323 KCNS3Q9BQ31 491 aa10.96□□□□□ -0.65
SYNE2-219ENST00000555323 ZNF649Q9BS31 505 aa10.96□□□□□ -0.65
SYNE2-219ENST00000555323 JAM3Q9BX67 310 aa10.96□□□□□ -0.65
SYNE2-219ENST00000555323 Q9H521 79 aa10.96□□□□□ -0.65
SYNE2-219ENST00000555323 FGF20Q9NP95 211 aaPredicted RBP10.96□□□□□ -0.65
SYNE2-219ENST00000555323 LRRC42Q9Y546 428 aa10.96□□□□□ -0.65
SYNE2-219ENST00000555323 A0A1W2PQL4 384 aaPredicted RBP10.95□□□□□ -0.66
SYNE2-219ENST00000555323 IRGMA1A4Y4 181 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 ZNF670-ZNF695F2Z2N8 137 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 ATP6V1G2-DDX39BF2Z307 99 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 J3QW42 95 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 FADS2O95864 444 aaKnown RBP10.95□□□□□ -0.66
SYNE2-219ENST00000555323 DBHP09172 617 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 CCDC159P0C7I6 412 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 ACSM4P0C7M7 580 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 PIPP12273 146 aaPredicted RBP10.95□□□□□ -0.66
SYNE2-219ENST00000555323 TUBG1P23258 451 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 DCKP27707 260 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 GLRXP35754 106 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 RAD52P43351 418 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 UCP2P55851 309 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 GRB2P62993 217 aaKnown RBP10.95□□□□□ -0.66
SYNE2-219ENST00000555323 ACTC1P68032 377 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 ACTA1P68133 377 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 SPOCK1Q08629 439 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 ZNF672Q499Z4 452 aaPredicted RBP10.95□□□□□ -0.66
SYNE2-219ENST00000555323 ZNF787Q6DD87 383 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 ARL9Q6T311 187 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 SLC22A25Q6T423 547 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 ZNF322Q6U7Q0 402 aaPredicted RBP10.95□□□□□ -0.66
SYNE2-219ENST00000555323 UNQ6126/PRO20091Q6UXV3 157 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 ZNF679Q8IYX0 411 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 ACBD7Q8N6N7 88 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 KBTBD8Q8NFY9 601 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 OR52I1Q8NGK6 324 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 SLC7A6Q92536 515 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 GGHQ92820 318 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 SPTSSAQ969W0 71 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 OR8B4Q96RC9 309 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 MROQ9BYG7 248 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 CLEC4MQ9H2X3 399 aaPredicted RBP10.95□□□□□ -0.66
SYNE2-219ENST00000555323 ZNF442Q9H7R0 627 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 NIPAL2Q9H841 368 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 PLEKHF2Q9H8W4 249 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 ELOVL3Q9HB03 270 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 CDH20Q9HBT6 801 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 TUBG2Q9NRH3 451 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 INPP5EQ9NRR6 644 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 CENPMQ9NSP4 180 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 FKBP14Q9NWM8 211 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 CNOT2Q9NZN8 540 aaKnown RBP10.95□□□□□ -0.66
SYNE2-219ENST00000555323 EIF3KQ9UBQ5 218 aaKnown RBP10.95□□□□□ -0.66
SYNE2-219ENST00000555323 PSORS1C1Q9UIG5 152 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 MYRFQ9Y2G1 1151 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 SPEF1Q9Y4P9 236 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 ABCA4P78363 2273 aa10.95□□□□□ -0.66
SYNE2-219ENST00000555323 EFCAB10A6NFE3 127 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 PRR32B1ATL7 298 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 E7EQL1 145 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 F5H5K5 113 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 SULT1C4O75897 302 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 APOL3O95236 402 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 APOC1P02654 83 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 CCNOP22674 350 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 WNT5AP41221 380 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 RGS6P49758 472 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 TPTEP56180 551 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 GALK2Q01415 458 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 ZNF85Q03923 595 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 DRAM2Q6UX65 266 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 SSX6Q7RTT6 188 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 PRSS45Q7RTY3 260 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 KCTD20Q7Z5Y7 419 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 ZNF101Q8IZC7 436 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 BPIFB6Q8NFQ5 453 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 OR10H4Q8NGA5 316 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 CNBD2Q96M20 576 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 C1QTNF5Q9BXJ0 243 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 BCL2L14Q9BZR8 327 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 CA10Q9NS85 328 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 SLCO1C1Q9NYB5 712 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 UBAP1Q9NZ09 502 aa10.94□□□□□ -0.66
SYNE2-219ENST00000555323 CISD1Q9NZ45 108 aaKnown RBP10.94□□□□□ -0.66
SYNE2-219ENST00000555323 HEATR1Q9H583 2144 aaKnown RBP10.94□□□□□ -0.66
SYNE2-219ENST00000555323 M0R135 149 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 SLC1A7O00341 560 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 XPNPEP2O43895 674 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 SMPD2O60906 423 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 NGFP01138 241 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 H2BFMP0C1H6 154 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 PRF1P14222 555 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 APOBEC3AP31941 199 aaPredicted RBP10.93□□□□□ -0.66
SYNE2-219ENST00000555323 GALEQ14376 348 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 TAF13Q15543 124 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 CDONQ4KMG0 1287 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 KRT80Q6KB66 452 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 ZNF544Q6NX49 715 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 LRRN1Q6UXK5 716 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms