RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 ZNF600Q6ZNG1 722 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 MED25Q71SY5 747 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 GKN2Q86XP6 184 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 PAQR4Q8N4S7 273 aaPredicted RBP9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 LRRC75AQ8NAA5 344 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 ZNF511Q8NB15 262 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 ELOA3Q8NG57 546 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 OR4C3Q8NH37 302 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 NANPQ8TBE9 248 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 MMABQ96EY8 250 aaPredicted RBP9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 NUDT16L1Q9BRJ7 211 aaKnown RBP9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 GPR174Q9BXC1 333 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 SLC2A4RGQ9NR83 387 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 SHPKQ9UHJ6 478 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 TINAGQ9UJW2 476 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 VSIG4Q9Y279 399 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 TRANK1O15050 2925 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 TMEM131Q92545 1883 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 FITM1A5D6W6 292 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 MEIS3P1A6NDR6 274 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 SCDO00767 359 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 AKR7A3O95154 331 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 IL33O95760 270 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 CD2P06729 351 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 PGAM2P15259 253 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 FOSL1P15407 271 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 HPGDP15428 266 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 ABCD3P28288 659 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 GABRA4P48169 554 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 PGDP52209 483 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 BTG2P78543 158 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 MST1LQ2TV78 715 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 GFOD2Q3B7J2 385 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 LRRC37A5PQ49AS3 106 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 RNASE10Q5GAN6 216 aaKnown RBP9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 BEX5Q5H9J7 111 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 PRSS35Q8N3Z0 413 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 ZSCAN1Q8NBB4 408 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 SMRP1Q8NCR6 262 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 ADAMTS17Q8TE56 1095 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 MAP3K3Q99759 626 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 SLC6A7Q99884 636 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 ADAT1Q9BUB4 502 aaKnown RBP9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 RHOFQ9HBH0 211 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 CYTL1Q9NRR1 136 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 DNAJB11Q9UBS4 358 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 FBXO4Q9UKT5 387 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 MMACHCQ9Y4U1 282 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 M0QYG6 137 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 TAAR5O14804 337 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 SSX5O60225 188 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 ALOX12BO75342 701 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 RENP00797 406 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 MT-ND4LP03901 98 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 DCNP07585 359 aaKnown RBP9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 RCC1P18754 421 aaPredicted RBP9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 LTBRP36941 435 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 KIR3DL2P43630 455 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 SLC6A8P48029 635 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 CSNK1EP49674 416 aaKnown RBP9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 AKR1C2P52895 323 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 STARD6P59095 220 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 AKR1C1Q04828 323 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 PMPCAQ10713 525 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 PPP1R1AQ13522 171 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 ZNF74Q16587 644 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 EIF2S3LQ2VIR3 472 aaKnown RBP9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 WDR38Q5JTN6 314 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 TEX30Q5JUR7 227 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 EEF1A1P5Q5VTE0 462 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 FNDC7Q5VTL7 733 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 TMEM244Q5VVB8 128 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 C5orf46Q6UWT4 87 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 UNQ6126/PRO20091Q6UXV3 157 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 ATG4DQ86TL0 474 aaPredicted RBP9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 C2CD4CQ8TF44 421 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 ARSGQ96EG1 525 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 SEC22AQ96IW7 307 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 SLC46A1Q96NT5 459 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 OR5B2Q96R09 309 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 OR8B4Q96RC9 309 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 TAAR9Q96RI9 348 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 INTS14Q96SY0 518 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 ADAM19Q9H013 955 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 PDE7BQ9NP56 450 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 SLC22A11Q9NSA0 550 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 KPTNQ9Y664 436 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 KIF26BQ2KJY2 2108 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 IGKV1D-42A0A075B6H8 117 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 LOC390937A0A1W2PQ73 354 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 TLCD2A6NGC4 264 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 ZNF217O75362 1048 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 CLPSP04118 112 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 CD5P06127 495 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 GLAP06280 429 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 IGFBP3P17936 291 aaPredicted RBP9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 AGAP20933 346 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 CCKBRP32239 447 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 GSK3AP49840 483 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 SNRPEP62304 92 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms