RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 INSL4Q14641 139 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 SLC18B1Q6NT16 456 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 BVESQ8NE79 360 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 OR6C68A6NDL8 312 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 ACOD1A6NK06 481 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 OR2T7P0C7T2 308 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 DAP3P51398 398 aaKnown RBP14.91□□□□□ -0.02
PCNX1-209ENST00000554879 OR2T27Q8NH04 317 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 FKRPQ9H9S5 495 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 PLEKHA1Q9HB21 404 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 CCDC187A0A096LP49 1063 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 IMPA2O14732 288 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 FADS1O60427 444 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 IGHEP01854 428 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 ANKRD34CP0C6C1 535 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 SHC1P29353 583 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 GABRA5P31644 462 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 RGS19P49795 217 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 TMUB2Q71RG4 321 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 H1FNTQ75WM6 255 aaPredicted RBP14.91□□□□□ -0.02
PCNX1-209ENST00000554879 ATG4DQ86TL0 474 aaPredicted RBP14.91□□□□□ -0.02
PCNX1-209ENST00000554879 HAVCR2Q8TDQ0 301 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 CT55Q8WUE5 264 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 CNTNAP3BQ96NU0 1288 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 RASD1Q9Y272 281 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 WIF1Q9Y5W5 379 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 CRABP1P29762 137 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 RPP30P78346 268 aaKnown RBP14.91□□□□□ -0.02
PCNX1-209ENST00000554879 SSX1Q16384 188 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 C3orf33Q6P1S2 294 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 MARVELD1Q9BSK0 173 aa14.91□□□□□ -0.02
PCNX1-209ENST00000554879 IGKV3D-11A0A0A0MRZ8 115 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 BHLHE40O14503 412 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 EDN3P14138 238 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 APOBEC1P41238 236 aaKnown RBP14.9□□□□□ -0.02
PCNX1-209ENST00000554879 RIDAP52758 137 aaKnown RBP14.9□□□□□ -0.02
PCNX1-209ENST00000554879 HYAL4Q2M3T9 481 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 FAM180AQ6UWF9 173 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 COX15Q7KZN9 410 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 PRSS45Q7RTY3 260 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 JAGN1Q8N5M9 183 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 OR13C5Q8NGS8 318 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 GPER1Q99527 375 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 HRH4Q9H3N8 390 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 B4GALT7Q9UBV7 327 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 A0A1B0GV50 99 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 PPP3CBP16298 524 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 RPL27P61353 136 aaKnown RBP14.9□□□□□ -0.02
PCNX1-209ENST00000554879 RNF212Q495C1 297 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 TMEM201Q5SNT2 666 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 NDUFAF7Q7L592 441 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 INO80EQ8NBZ0 244 aaPredicted RBP14.9□□□□□ -0.02
PCNX1-209ENST00000554879 OR5AK2Q8NH90 309 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 ELOVL3Q9HB03 270 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 TCFL5Q9UL49 500 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 COA3Q9Y2R0 106 aaPredicted RBP14.9□□□□□ -0.02
PCNX1-209ENST00000554879 IGHV3-15A0A0B4J1V0 119 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 ZNF705GA8MUZ8 300 aaPredicted RBP14.9□□□□□ -0.02
PCNX1-209ENST00000554879 GLCEO94923 617 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 MT-ATP6P00846 226 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 SIRPAP78324 504 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 ARG2P78540 354 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 ISXQ2M1V0 245 aa14.9□□□□□ -0.02
PCNX1-209ENST00000554879 TIPARPQ7Z3E1 657 aaKnown RBP14.9□□□□□ -0.02
PCNX1-209ENST00000554879 TSPAN10Q9H1Z9 355 aaPredicted RBP14.9□□□□□ -0.02
PCNX1-209ENST00000554879 CYTIPO60759 359 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 ELK1P19419 428 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 ACHEP22303 614 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 CDKN2AP42771 156 aaKnown RBP14.89□□□□□ -0.03
PCNX1-209ENST00000554879 PITPNAQ00169 270 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 FAM27D1Q5T7N8 215 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 ARIH2OSQ8N7S6 290 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 OR11G2Q8NGC1 345 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 OR8S1Q8NH09 359 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 NUBPLQ8TB37 319 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 FGF20Q9NP95 211 aaPredicted RBP14.89□□□□□ -0.03
PCNX1-209ENST00000554879 RCE1Q9Y256 329 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 PCNX2A6NKB5 2137 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 FAM166BA8MTA8 275 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 CLDN17P56750 224 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 MEP1BQ16820 701 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 OR2B11Q5JQS5 317 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 SYT9Q86SS6 491 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 UTP23Q9BRU9 249 aaKnown RBP14.89□□□□□ -0.03
PCNX1-209ENST00000554879 SHARPINQ9H0F6 387 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 LRFN1Q9P244 771 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 ARGFXA6NJG6 315 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 FGF5P12034 268 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 MSX1P28360 303 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 DIO1P49895 249 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 LUMP51884 338 aaPredicted RBP14.89□□□□□ -0.03
PCNX1-209ENST00000554879 FABP5Q01469 135 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 ZNF283Q8N7M2 679 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 ST8SIA1Q92185 356 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 NAA11Q9BSU3 229 aaPredicted RBP14.89□□□□□ -0.03
PCNX1-209ENST00000554879 C20orf24Q9BUV8 137 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 ZNF223Q9UK11 482 aaPredicted RBP14.89□□□□□ -0.03
PCNX1-209ENST00000554879 ANKRD61A6NGH8 418 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 TSPAN2O60636 221 aa14.89□□□□□ -0.03
PCNX1-209ENST00000554879 APEHP13798 732 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms